BLASTX nr result

ID: Cnidium21_contig00032666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032666
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616288.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   139   3e-31
emb|CAE02205.2| OSJNBa0095H06.12 [Oryza sativa Japonica Group]        132   2e-29
ref|XP_002464527.1| hypothetical protein SORBIDRAFT_01g020130 [S...   132   2e-29
gb|EEC82986.1| hypothetical protein OsI_28021 [Oryza sativa Indi...   132   2e-29
gb|AFW61004.1| hypothetical protein ZEAMMB73_411669 [Zea mays]        132   3e-29

>ref|XP_003616288.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355517623|gb|AES99246.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1567

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/123 (54%), Positives = 88/123 (71%), Gaps = 3/123 (2%)
 Frame = -3

Query: 361 PPEPLASLLSGCE-KSKHFKQNIRVYNCMFSFTSTGGKVDNKINRGRGPYCFRLQGQNYH 185
           PP  L  L +G   +S HF  NIR YN +FSFTS GGK++ +INRG+GP  F + GQNYH
Sbjct: 210 PPPLLRQLFNGLHPRSGHFLANIRSYNNLFSFTSMGGKIETEINRGQGPPHFVISGQNYH 269

Query: 184 LLGSLVPGDGSTPKFCQLYIYDTENEVDNRINAMGGSTD--NIDPDIVESLLAMLNKHNK 11
            +G L+P DG  PKFCQLYIYDTENE+ NR+    G +D  N+D  ++E LL+++++HNK
Sbjct: 270 RIGCLLPADGERPKFCQLYIYDTENELANRMAHFSGRSDESNLDSSLIEELLSLMDEHNK 329

Query: 10  LVK 2
           LVK
Sbjct: 330 LVK 332


>emb|CAE02205.2| OSJNBa0095H06.12 [Oryza sativa Japonica Group]
          Length = 1724

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/125 (53%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
 Frame = -3

Query: 361 PPEPLASLLS--GCEKSKHFKQNIRVYNCMFSFTSTGGKVDNKINRGRGPYCFRLQGQNY 188
           PPEPL SLL   G  +SKHF Q+IR YN +FSFTS G  +D+ +N+G GPY F++ GQ Y
Sbjct: 278 PPEPLNSLLKFDGDARSKHFLQHIRQYNSLFSFTSMGADIDDSLNQGGGPYVFKINGQVY 337

Query: 187 HLLGSLVPGDGSTPKFCQLYIYDTENEVDNRINAMGGSTD---NIDPDIVESLLAMLNKH 17
           H +GSL+P + + PKF QLYIYDT+NEV NR+ A+ G  +   ++DP+I   LL ML+  
Sbjct: 338 HRIGSLLPNEDNPPKFAQLYIYDTQNEVQNRMLAVLGEENGSCDLDPEIAAELLDMLDNC 397

Query: 16  NKLVK 2
           N LVK
Sbjct: 398 NPLVK 402


>ref|XP_002464527.1| hypothetical protein SORBIDRAFT_01g020130 [Sorghum bicolor]
           gi|241918381|gb|EER91525.1| hypothetical protein
           SORBIDRAFT_01g020130 [Sorghum bicolor]
          Length = 1318

 Score =  132 bits (333), Expect = 2e-29
 Identities = 66/124 (53%), Positives = 90/124 (72%), Gaps = 4/124 (3%)
 Frame = -3

Query: 361 PPEPLASLLS--GCEKSKHFKQNIRVYNCMFSFTSTGGKVDNKINRGRGPYCFRLQGQNY 188
           PP  LASLL+  G + S +++QNIR YN MF+ TS GG VD  IN+GRGPY FRL+GQNY
Sbjct: 33  PPSYLASLLAVDGGKSSANYQQNIRSYNSMFALTSMGGSVDKNINKGRGPYVFRLKGQNY 92

Query: 187 HLLGSLVPGDGSTPKFCQLYIYDTENEVDNR--INAMGGSTDNIDPDIVESLLAMLNKHN 14
           H +G+L+P +G  P+F QLYIYDT+NE+ NR  ++  G  +  +D  I+ SL+ MLN++N
Sbjct: 93  HHIGTLLPQEGDKPRFQQLYIYDTKNEIHNRLQVSRSGECSAPLDESIITSLVTMLNENN 152

Query: 13  KLVK 2
            LV+
Sbjct: 153 TLVQ 156


>gb|EEC82986.1| hypothetical protein OsI_28021 [Oryza sativa Indica Group]
          Length = 937

 Score =  132 bits (333), Expect = 2e-29
 Identities = 68/122 (55%), Positives = 88/122 (72%), Gaps = 2/122 (1%)
 Frame = -3

Query: 361 PPEPLASLLSGCEK-SKHFKQNIRVYNCMFSFTSTGGKVDNKINRGRGPYCFRLQGQNYH 185
           PP+ L  LL+G  K S +F++NIR YN MF+FTS GG VD +IN G+GPY FRL GQNYH
Sbjct: 141 PPQYLKRLLTGEGKDSTNFRENIRSYNSMFAFTSMGGIVDKEINMGKGPYVFRLHGQNYH 200

Query: 184 LLGSLVPGDGSTPKFCQLYIYDTENEVDNRINAMGGSTDN-IDPDIVESLLAMLNKHNKL 8
            +G+L+P +G+ P+F QLYIYDTENEV NRI+  G S    +DP IV  L  M++++N L
Sbjct: 201 HIGTLLPEEGNKPRFAQLYIYDTENEVANRISVSGCSDKTPVDPSIVTDLQNMIDENNIL 260

Query: 7   VK 2
            K
Sbjct: 261 AK 262


>gb|AFW61004.1| hypothetical protein ZEAMMB73_411669 [Zea mays]
          Length = 769

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/124 (52%), Positives = 86/124 (69%), Gaps = 5/124 (4%)
 Frame = -3

Query: 358 PEPLASL--LSGCEKSKHFKQNIRVYNCMFSFTSTGGKVDNKINRGRGPYCFRLQGQNYH 185
           PEPL+SL    G   SK   +NIR YNC+F+FTS G ++DN +N GRGP  F++ GQ +H
Sbjct: 93  PEPLSSLARFDGDITSKKIIRNIRQYNCLFAFTSMGAQIDNSVNDGRGPPLFKICGQVHH 152

Query: 184 LLGSLVPGDGSTPKFCQLYIYDTENEVDNRINAMGGSTDN---IDPDIVESLLAMLNKHN 14
            +GSL+P DGS+PKF QLYIYDT NE+ NR+N++G +  N   +DP IV  L+ ML+ HN
Sbjct: 153 RIGSLLPSDGSSPKFIQLYIYDTANEIQNRMNSLGNNDRNDGGLDPVIVNGLIKMLDDHN 212

Query: 13  KLVK 2
              K
Sbjct: 213 PFAK 216


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