BLASTX nr result

ID: Cnidium21_contig00032661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032661
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148481.1| PREDICTED: mitochondrial carnitine/acylcarni...    73   6e-14
gb|AAK00455.1|AC060755_25 putative carnitine/acylcarnitine trans...    81   8e-14
gb|ABR17700.1| unknown [Picea sitchensis]                              70   2e-13
ref|XP_003574376.1| PREDICTED: mitochondrial carnitine/acylcarni...    77   2e-12
ref|XP_002464891.1| hypothetical protein SORBIDRAFT_01g028320 [S...    74   1e-11

>ref|XP_004148481.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like
           protein-like [Cucumis sativus]
          Length = 296

 Score = 73.2 bits (178), Expect(2) = 6e-14
 Identities = 38/74 (51%), Positives = 49/74 (66%)
 Frame = -2

Query: 355 GPMDVAKHVS*PACMKGLFKRLFPKMAHQTSGDAAMFGAYEGLKQYIAGGHYQFKVG*GS 176
           GPMDVAKHV     +KGLFK L P +A +  G+A +FG YE LKQ+ AGG     +G GS
Sbjct: 152 GPMDVAKHVFQSQGVKGLFKGLVPTLAREVPGNAVVFGVYEMLKQHFAGGRDTSNLGRGS 211

Query: 175 LMLARGLA*VFFYL 134
           LM+A G++   F+L
Sbjct: 212 LMVAGGISGAAFWL 225



 Score = 28.9 bits (63), Expect(2) = 6e-14
 Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = -1

Query: 155 GLSFFLFVYPTN-LKSAILVDDY 90
           G +F+L VYPTN +KS I VDD+
Sbjct: 220 GAAFWLAVYPTNVVKSVIQVDDF 242


>gb|AAK00455.1|AC060755_25 putative carnitine/acylcarnitine translocase [Oryza sativa Japonica
           Group] gi|125533046|gb|EAY79611.1| hypothetical protein
           OsI_34752 [Oryza sativa Indica Group]
           gi|125575779|gb|EAZ17063.1| hypothetical protein
           OsJ_32559 [Oryza sativa Japonica Group]
           gi|215768812|dbj|BAH01041.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 296

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/74 (56%), Positives = 50/74 (67%)
 Frame = -2

Query: 355 GPMDVAKHVS*PACMKGLFKRLFPKMAHQTSGDAAMFGAYEGLKQYIAGGHYQFKVG*GS 176
           GP+DVAKHV   A MKGLFK L P M  +  G+A MFG YEG KQY+AGG     +G GS
Sbjct: 152 GPIDVAKHVVREAGMKGLFKGLVPTMGREVPGNAVMFGVYEGTKQYLAGGQDTSNLGRGS 211

Query: 175 LMLARGLA*VFFYL 134
           L+L+ GLA   F+L
Sbjct: 212 LILSGGLAGAVFWL 225


>gb|ABR17700.1| unknown [Picea sitchensis]
          Length = 308

 Score = 70.1 bits (170), Expect(2) = 2e-13
 Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = -2

Query: 355 GPMDVAKHV-S*PACMKGLFKRLFPKMAHQTSGDAAMFGAYEGLKQYIAGGHYQFKVG*G 179
           GP+DVAKHV       +GLFK L P ++ +  G+AAMFG YEG+KQ++AGG    ++G G
Sbjct: 163 GPLDVAKHVLKSEGGARGLFKGLVPTLSREVPGNAAMFGVYEGVKQFMAGGRDTSQLGRG 222

Query: 178 SLMLARGLA*VFFYLY 131
           +L+ + G+A   F+L+
Sbjct: 223 ALLTSGGIAGAAFWLF 238



 Score = 30.0 bits (66), Expect(2) = 2e-13
 Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
 Frame = -1

Query: 155 GLSFFLFVYPTN-LKSAILVDDY 90
           G +F+LFVYPT+ +KS I VDD+
Sbjct: 232 GAAFWLFVYPTDVVKSVIQVDDF 254


>ref|XP_003574376.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like
           protein-like [Brachypodium distachyon]
          Length = 296

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/68 (57%), Positives = 47/68 (69%)
 Frame = -2

Query: 355 GPMDVAKHVS*PACMKGLFKRLFPKMAHQTSGDAAMFGAYEGLKQYIAGGHYQFKVG*GS 176
           GP+DVAKHV   A +KGLFK L P M  +  G+A MFG YE +KQY+AGG     +G GS
Sbjct: 152 GPLDVAKHVMKDAGLKGLFKGLVPTMGREIPGNAIMFGVYEAVKQYMAGGQDTSSLGQGS 211

Query: 175 LMLARGLA 152
           L+LA GLA
Sbjct: 212 LILAGGLA 219


>ref|XP_002464891.1| hypothetical protein SORBIDRAFT_01g028320 [Sorghum bicolor]
           gi|241918745|gb|EER91889.1| hypothetical protein
           SORBIDRAFT_01g028320 [Sorghum bicolor]
          Length = 296

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/74 (54%), Positives = 47/74 (63%)
 Frame = -2

Query: 355 GPMDVAKHVS*PACMKGLFKRLFPKMAHQTSGDAAMFGAYEGLKQYIAGGHYQFKVG*GS 176
           GP+DVAKHV   A  KGLFK L P M  +  G+A MFG YE  KQY+AGG     +G GS
Sbjct: 152 GPIDVAKHVVRDAGAKGLFKGLVPTMGREVPGNAMMFGVYEATKQYLAGGPDTSNLGRGS 211

Query: 175 LMLARGLA*VFFYL 134
            +LA GLA   F+L
Sbjct: 212 QILAGGLAGAAFWL 225


Top