BLASTX nr result

ID: Cnidium21_contig00032658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032658
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17162.3| unnamed protein product [Vitis vinifera]              142   3e-32
gb|AFK35500.1| unknown [Lotus japonicus]                              136   2e-30
ref|XP_002523696.1| conserved hypothetical protein [Ricinus comm...   135   3e-30
ref|NP_190088.1| Ribosomal L18p/L5e family protein [Arabidopsis ...   135   3e-30
ref|XP_004152166.1| PREDICTED: 50S ribosomal protein L18-like is...   134   8e-30

>emb|CBI17162.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/129 (55%), Positives = 93/129 (72%), Gaps = 1/129 (0%)
 Frame = -1

Query: 387 TAMTRHVLKLYISVKFITANIVNRTTGDLIATASTVEHCIRNSFDCGRSSNPKAAAAVGE 208
           T + R+VL+L+IS+K+ITAN+V+R  G +IATASTVEH I+ S +CGRS N KAA  VGE
Sbjct: 2   TVLKRYVLRLFISLKYITANVVDRNNGRIIATASTVEHAIKGSLECGRSCNAKAAGVVGE 61

Query: 207 VLAKRFRIASFSGGGDAAARGIHVDVNHEIEKKGSEKSKMIWCVVNSLRNDGLKIVL-DD 31
           VLA R ++     G     RGIHVDVN E+EKKG +    IW VVN L+N+G+K++L DD
Sbjct: 62  VLAMRLKVEGLEEG---QGRGIHVDVNKEVEKKGFKNRTKIWAVVNGLKNNGIKLILDDD 118

Query: 30  ESRSGPSVR 4
           E+ S PS R
Sbjct: 119 ENSSRPSYR 127


>gb|AFK35500.1| unknown [Lotus japonicus]
          Length = 128

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/126 (52%), Positives = 92/126 (73%)
 Frame = -1

Query: 387 TAMTRHVLKLYISVKFITANIVNRTTGDLIATASTVEHCIRNSFDCGRSSNPKAAAAVGE 208
           T M R+VL+L+ S+K+ITAN+V+R  G ++AT+STVEH ++ S +CGRS N KAAA VGE
Sbjct: 2   TLMKRYVLRLFTSLKYITANVVDRNNGRIVATSSTVEHAMKESLECGRSCNAKAAAIVGE 61

Query: 207 VLAKRFRIASFSGGGDAAARGIHVDVNHEIEKKGSEKSKMIWCVVNSLRNDGLKIVLDDE 28
           VLA+R ++    G  +   RGIHV+V  E+EKKG +    IW VVN+L+N+G+K+VLDDE
Sbjct: 62  VLARRLKV---EGLNEGEGRGIHVNVKKEVEKKGFKNQTKIWAVVNALKNNGVKLVLDDE 118

Query: 27  SRSGPS 10
             +  S
Sbjct: 119 DDTNSS 124


>ref|XP_002523696.1| conserved hypothetical protein [Ricinus communis]
           gi|223537000|gb|EEF38636.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 129

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/126 (50%), Positives = 90/126 (71%)
 Frame = -1

Query: 387 TAMTRHVLKLYISVKFITANIVNRTTGDLIATASTVEHCIRNSFDCGRSSNPKAAAAVGE 208
           T + R+VL+++IS+K+ITAN+V+R  G ++ATASTVEH I+N+ +CGRS N KAAA VGE
Sbjct: 2   TVLKRYVLRMFISLKYITANVVDRNNGRIVATASTVEHSIKNTLECGRSCNAKAAAIVGE 61

Query: 207 VLAKRFRIASFSGGGDAAARGIHVDVNHEIEKKGSEKSKMIWCVVNSLRNDGLKIVLDDE 28
           VLA R ++     G     RGIHVD N E+EKKG +    IW ++N+LRN+G+K++ +D 
Sbjct: 62  VLAMRLKVEGLEQG---QGRGIHVDANKEVEKKGFKNRTKIWAIINALRNNGVKVISNDN 118

Query: 27  SRSGPS 10
             +  S
Sbjct: 119 DENNKS 124


>ref|NP_190088.1| Ribosomal L18p/L5e family protein [Arabidopsis thaliana]
           gi|7671403|emb|CAB89317.1| putative protein [Arabidopsis
           thaliana] gi|48310069|gb|AAT41747.1| At3g45020
           [Arabidopsis thaliana] gi|48310526|gb|AAT41833.1|
           At3g45020 [Arabidopsis thaliana]
           gi|62320578|dbj|BAD95207.1| hypothetical protein
           [Arabidopsis thaliana] gi|332644459|gb|AEE77980.1|
           Ribosomal L18p/L5e family protein [Arabidopsis thaliana]
          Length = 133

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/120 (53%), Positives = 88/120 (73%)
 Frame = -1

Query: 387 TAMTRHVLKLYISVKFITANIVNRTTGDLIATASTVEHCIRNSFDCGRSSNPKAAAAVGE 208
           T + R+VL+L++S+K+ITAN+V+R  G ++ TASTVEH I+NS +CGR+ N KAAA VGE
Sbjct: 2   TVLKRYVLRLFMSIKYITANVVDRNNGRIVTTASTVEHTIKNSLECGRTCNAKAAAIVGE 61

Query: 207 VLAKRFRIASFSGGGDAAARGIHVDVNHEIEKKGSEKSKMIWCVVNSLRNDGLKIVLDDE 28
           VLA R ++    G  D   RGIH DV  EIEKKG +    +W V+NSLRN+G+ ++LDD+
Sbjct: 62  VLAMRLKV---EGLQDGQGRGIHADVKKEIEKKGFKSRTKVWAVINSLRNNGVTLILDDD 118


>ref|XP_004152166.1| PREDICTED: 50S ribosomal protein L18-like isoform 1 [Cucumis
           sativus] gi|449468916|ref|XP_004152167.1| PREDICTED: 50S
           ribosomal protein L18-like isoform 2 [Cucumis sativus]
          Length = 129

 Score =  134 bits (337), Expect = 8e-30
 Identities = 64/119 (53%), Positives = 88/119 (73%)
 Frame = -1

Query: 387 TAMTRHVLKLYISVKFITANIVNRTTGDLIATASTVEHCIRNSFDCGRSSNPKAAAAVGE 208
           T + R+VL+L++S+K+ITAN+V+R  G ++ATASTVEH I+NS +CGRS N KAAA VGE
Sbjct: 2   TLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGE 61

Query: 207 VLAKRFRIASFSGGGDAAARGIHVDVNHEIEKKGSEKSKMIWCVVNSLRNDGLKIVLDD 31
           VLA R ++     G     RGIH D+  EIEKKG +    IW +VNSL+N+G+K++LD+
Sbjct: 62  VLAMRLKVDGLEQG---QGRGIHADIKKEIEKKGFKNHTKIWAIVNSLKNNGVKLILDN 117


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