BLASTX nr result

ID: Cnidium21_contig00032657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032657
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]   195   4e-48
emb|CBI16012.3| unnamed protein product [Vitis vinifera]              195   4e-48
ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max]      192   2e-47
ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223...   185   3e-45
ref|XP_004163748.1| PREDICTED: helicase SKI2W-like [Cucumis sati...   179   2e-43

>ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]
          Length = 1379

 Score =  195 bits (495), Expect = 4e-48
 Identities = 91/127 (71%), Positives = 104/127 (81%)
 Frame = +3

Query: 24  MDRINVVNELPFRVGFTGHSGHLRIETLPPVESSDPLSSLPDFILPPAFPTETPESIKEY 203
           M+RI V ++  FRVGF+GHSGHLR+E LPPVE  +PLSSLPDFI PPAF  ETPE+IKEY
Sbjct: 1   MNRIQVGHDASFRVGFSGHSGHLRLEPLPPVERPNPLSSLPDFISPPAFARETPETIKEY 60

Query: 204 IEEKYLLPRLDADDFSPDKDGRQWEFDWFDNAKVNLEPSLPRSVVVPTWELPFRRSSMST 383
           IE+ YLLPRLD D+FSP+K GRQW+FDWFD AKV LEPSLPRSVVV  WELPFRRS   +
Sbjct: 61  IEDTYLLPRLDPDEFSPEKVGRQWDFDWFDRAKVPLEPSLPRSVVVQKWELPFRRSKKES 120

Query: 384 MSNIWDP 404
            S  W+P
Sbjct: 121 ASGKWEP 127


>emb|CBI16012.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  195 bits (495), Expect = 4e-48
 Identities = 91/127 (71%), Positives = 104/127 (81%)
 Frame = +3

Query: 24  MDRINVVNELPFRVGFTGHSGHLRIETLPPVESSDPLSSLPDFILPPAFPTETPESIKEY 203
           M+RI V ++  FRVGF+GHSGHLR+E LPPVE  +PLSSLPDFI PPAF  ETPE+IKEY
Sbjct: 1   MNRIQVGHDASFRVGFSGHSGHLRLEPLPPVERPNPLSSLPDFISPPAFARETPETIKEY 60

Query: 204 IEEKYLLPRLDADDFSPDKDGRQWEFDWFDNAKVNLEPSLPRSVVVPTWELPFRRSSMST 383
           IE+ YLLPRLD D+FSP+K GRQW+FDWFD AKV LEPSLPRSVVV  WELPFRRS   +
Sbjct: 61  IEDTYLLPRLDPDEFSPEKVGRQWDFDWFDRAKVPLEPSLPRSVVVQKWELPFRRSKKES 120

Query: 384 MSNIWDP 404
            S  W+P
Sbjct: 121 ASGKWEP 127


>ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max]
          Length = 1342

 Score =  192 bits (489), Expect = 2e-47
 Identities = 89/127 (70%), Positives = 102/127 (80%)
 Frame = +3

Query: 24  MDRINVVNELPFRVGFTGHSGHLRIETLPPVESSDPLSSLPDFILPPAFPTETPESIKEY 203
           MD I   NEL FRVGF+GHSGHLR+E L   E  +PL S+PDFI PPAFP+ETPESIK+Y
Sbjct: 1   MDPIQAANELAFRVGFSGHSGHLRLEPLSTEERRNPLRSIPDFIPPPAFPSETPESIKKY 60

Query: 204 IEEKYLLPRLDADDFSPDKDGRQWEFDWFDNAKVNLEPSLPRSVVVPTWELPFRRSSMST 383
           IEE YL PRLD DDFSP+K GRQWEFDWFD AKV LEPSLPR++VVP WE PFRRS+  +
Sbjct: 61  IEETYLQPRLDPDDFSPEKVGRQWEFDWFDRAKVPLEPSLPRTMVVPVWEPPFRRSNNGS 120

Query: 384 MSNIWDP 404
           +  IW+P
Sbjct: 121 VKGIWEP 127


>ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223540281|gb|EEF41852.1|
           helicase, putative [Ricinus communis]
          Length = 1335

 Score =  185 bits (470), Expect = 3e-45
 Identities = 87/128 (67%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
 Frame = +3

Query: 24  MDRINVVNELPFRVGFTGHSGHLRIETLPPVES-SDPLSSLPDFILPPAFPTETPESIKE 200
           M+RI   NEL FRVGF+G+SGHLR+E L  VE  +DP+ SLPDFILPPAFP ET ESIKE
Sbjct: 1   MNRIQATNELSFRVGFSGYSGHLRVEPLSTVEGRTDPVKSLPDFILPPAFPRETRESIKE 60

Query: 201 YIEEKYLLPRLDADDFSPDKDGRQWEFDWFDNAKVNLEPSLPRSVVVPTWELPFRRSSMS 380
           YIEE+YLLPRLD+D FSP+  GRQW+FDWF+ A V L PSLPR+VVVPTWE PFRR   +
Sbjct: 61  YIEEEYLLPRLDSDVFSPENAGRQWDFDWFEKANVLLNPSLPRAVVVPTWESPFRRQKST 120

Query: 381 TMSNIWDP 404
           +   IW+P
Sbjct: 121 SEQGIWEP 128


>ref|XP_004163748.1| PREDICTED: helicase SKI2W-like [Cucumis sativus]
          Length = 684

 Score =  179 bits (455), Expect = 2e-43
 Identities = 85/128 (66%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
 Frame = +3

Query: 24  MDRINVVNELPFRVGFTGHSGHLRIETLPPVESSDPLSSLPDFILPPAFPTETPESIKEY 203
           MD I    EL FRVGF+GHSGHLR+E L  VE S P+ SLPDFILPPAFP ETPE+IK Y
Sbjct: 1   MDPIEATKELSFRVGFSGHSGHLRVEPLSTVERSTPIRSLPDFILPPAFPKETPETIKNY 60

Query: 204 IEEKYLLPRLDADDFSPDKDGRQWEFDWFDNAKVNLEPSLPRSVVVPTWELPFRRSSM-S 380
           IEE YL PRLD D+FSP+K GRQW+FDWF+ AKV+L+PS PRSVVVPTW LPF R     
Sbjct: 61  IEETYLQPRLDPDEFSPEKVGRQWDFDWFEMAKVSLDPSPPRSVVVPTWVLPFERPKKDG 120

Query: 381 TMSNIWDP 404
                W+P
Sbjct: 121 AAGGTWEP 128


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