BLASTX nr result

ID: Cnidium21_contig00032655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032655
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17913.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]      69   4e-10
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]         55   6e-06

>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/94 (40%), Positives = 56/94 (59%)
 Frame = -1

Query: 316  EIGQFSESSQKGKVIENKDIEGTEQSKRFDSVHGTRMEEKNSIGSNEKLEKLEVMVDPIQ 137
            EI + SESSQ+GK  E +      + K  D      ++ +N + +++K EKLEVMVDP+Q
Sbjct: 1050 EIVEDSESSQRGKTEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTEKLEVMVDPVQ 1109

Query: 136  SMLLDMIPSLGTQTSAVTESKPQLSAPYVYETKP 35
            +MLLDMIPSLG +       K + + P + + KP
Sbjct: 1110 AMLLDMIPSLGVK-------KAESTNPIIDDEKP 1136


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/94 (40%), Positives = 56/94 (59%)
 Frame = -1

Query: 316  EIGQFSESSQKGKVIENKDIEGTEQSKRFDSVHGTRMEEKNSIGSNEKLEKLEVMVDPIQ 137
            EI + SESSQ+GK  E +      + K  D      ++ +N + +++K EKLEVMVDP+Q
Sbjct: 1049 EIVEDSESSQRGKTEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTEKLEVMVDPVQ 1108

Query: 136  SMLLDMIPSLGTQTSAVTESKPQLSAPYVYETKP 35
            +MLLDMIPSLG +       K + + P + + KP
Sbjct: 1109 AMLLDMIPSLGVK-------KAESTNPIIDDEKP 1135


>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]
          Length = 1171

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/73 (35%), Positives = 46/73 (63%)
 Frame = -1

Query: 316  EIGQFSESSQKGKVIENKDIEGTEQSKRFDSVHGTRMEEKNSIGSNEKLEKLEVMVDPIQ 137
            ++ +  ++S++ K+ + KD+   E+ +    V    M ++++  +NE  EKLE+  DP+Q
Sbjct: 1055 QVAEIEKNSEQNKLDKQKDLNDNERERML--VPEIEMSDRHNEQNNEVTEKLEISADPLQ 1112

Query: 136  SMLLDMIPSLGTQ 98
            +ML DMIPSL TQ
Sbjct: 1113 AMLFDMIPSLATQ 1125


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