BLASTX nr result

ID: Cnidium21_contig00032654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032654
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148511.1| PREDICTED: uncharacterized protein LOC101206...    67   4e-09
ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|2...    67   4e-09
ref|XP_002326984.1| predicted protein [Populus trichocarpa] gi|2...    67   4e-09
ref|XP_002510115.1| transcription initiation factor, putative [R...    61   3e-07
ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...    59   1e-06

>ref|XP_004148511.1| PREDICTED: uncharacterized protein LOC101206316 [Cucumis sativus]
           gi|449521952|ref|XP_004167993.1| PREDICTED:
           uncharacterized LOC101206316 [Cucumis sativus]
          Length = 898

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 34/65 (52%), Positives = 43/65 (66%)
 Frame = -2

Query: 196 QDLSSVSQCLRSQKMNSQQTAATSQVNNVLKNGKPVQFAMLFPVIKPLLDKDRAMQLTTL 17
           Q+  + SQ L+ QKM++QQ+    Q NN L   K V FA L PV+ P LDKDR MQL TL
Sbjct: 158 QNRDNESQYLKLQKMSNQQSMVAEQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTL 217

Query: 16  YDRLK 2
           ++RLK
Sbjct: 218 FNRLK 222


>ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|222861472|gb|EEE99014.1|
           predicted protein [Populus trichocarpa]
          Length = 875

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 36/70 (51%), Positives = 44/70 (62%)
 Frame = -2

Query: 211 EPD*TQDLSSVSQCLRSQKMNSQQTAATSQVNNVLKNGKPVQFAMLFPVIKPLLDKDRAM 32
           EPD  Q        L  QKM++QQTA T Q  N  KN K + FA+L P +KP LDKDR M
Sbjct: 164 EPDKMQSSDGDPHFLNFQKMSNQQTAGTDQAGNQ-KNSKQIPFAILLPALKPHLDKDREM 222

Query: 31  QLTTLYDRLK 2
           QL TLY++L+
Sbjct: 223 QLQTLYNKLR 232


>ref|XP_002326984.1| predicted protein [Populus trichocarpa] gi|222835299|gb|EEE73734.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 36/70 (51%), Positives = 44/70 (62%)
 Frame = -2

Query: 211 EPD*TQDLSSVSQCLRSQKMNSQQTAATSQVNNVLKNGKPVQFAMLFPVIKPLLDKDRAM 32
           EPD  Q        L  QKM++QQTA T Q  N  KN K + FA+L P +KP LDKDR M
Sbjct: 154 EPDKMQSSDGDPHFLNFQKMSNQQTAGTDQAGNQ-KNSKQIPFAILLPALKPHLDKDREM 212

Query: 31  QLTTLYDRLK 2
           QL TLY++L+
Sbjct: 213 QLQTLYNKLR 222


>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
           gi|223550816|gb|EEF52302.1| transcription initiation
           factor, putative [Ricinus communis]
          Length = 925

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 33/87 (37%), Positives = 46/87 (52%)
 Frame = -2

Query: 262 PKCRRFNYSNSTVAVGQEPD*TQDLSSVSQCLRSQKMNSQQTAATSQVNNVLKNGKPVQF 83
           P+  R   S +      EPD  Q   + SQ +  Q M +QQT    Q +N     KP+ F
Sbjct: 144 PRTIRTQISETNTMPKSEPDKMQIPDTESQYMNVQNMGNQQTMGPEQPSNPKNQFKPIPF 203

Query: 82  AMLFPVIKPLLDKDRAMQLTTLYDRLK 2
            +L P +KP LDKDR MQL  L+++L+
Sbjct: 204 MLLLPTLKPHLDKDRDMQLEILFNKLR 230


>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 33/70 (47%), Positives = 40/70 (57%)
 Frame = -2

Query: 211 EPD*TQDLSSVSQCLRSQKMNSQQTAATSQVNNVLKNGKPVQFAMLFPVIKPLLDKDRAM 32
           EPD   +     Q    QK+N+QQ  AT Q +N     K + F ML P I P LDKDRA+
Sbjct: 160 EPDRIHNPDKQHQFPELQKINNQQGIATEQASNSGNQNKHIPFGMLLPSIIPHLDKDRAL 219

Query: 31  QLTTLYDRLK 2
           QL TLY +LK
Sbjct: 220 QLRTLYAKLK 229


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