BLASTX nr result
ID: Cnidium21_contig00032653
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00032653 (479 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CU... 71 8e-11 ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor ... 71 8e-11 ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ... 55 8e-06 >ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor homolog 1-like [Cucumis sativus] Length = 1900 Score = 71.2 bits (173), Expect = 8e-11 Identities = 47/119 (39%), Positives = 60/119 (50%), Gaps = 4/119 (3%) Frame = +1 Query: 1 KKDANHSMDSKLASAIS-VRGKDEGRNRIRHVTENFQLDAPRIT-EGVVGDQVAERDSDR 174 +KD NH +D+K AS+ S ++ +DE R R+R V E LD R T E V DQV +RD++R Sbjct: 248 QKDGNHLLDAKNASSASGIKVRDESRVRVRQVLETSHLDDSRTTDERSVDDQVFDRDNER 307 Query: 175 SFSR--PAYQPWTDGGESPXXXXXXXXXXXXXXXXXXXWHGQDLRDRKTKCGDRNSQGR 345 SR P Q W G E P WHG D RD +TK GD + R Sbjct: 308 GLSRLAPPEQCWV-GEEGPDGLAPRSDGYEVDVEGEERWHGLDFRDGRTKHGDIDDNAR 365 >ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Cucumis sativus] Length = 1915 Score = 71.2 bits (173), Expect = 8e-11 Identities = 47/119 (39%), Positives = 60/119 (50%), Gaps = 4/119 (3%) Frame = +1 Query: 1 KKDANHSMDSKLASAIS-VRGKDEGRNRIRHVTENFQLDAPRIT-EGVVGDQVAERDSDR 174 +KD NH +D+K AS+ S ++ +DE R R+R V E LD R T E V DQV +RD++R Sbjct: 243 QKDGNHLLDAKNASSASGIKVRDESRVRVRQVLETSHLDDSRTTDERSVDDQVFDRDNER 302 Query: 175 SFSR--PAYQPWTDGGESPXXXXXXXXXXXXXXXXXXXWHGQDLRDRKTKCGDRNSQGR 345 SR P Q W G E P WHG D RD +TK GD + R Sbjct: 303 GLSRLAPPEQCWV-GEEGPDGLAPRSDGYEVDVEGEERWHGLDFRDGRTKHGDIDDNAR 360 >ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis vinifera] Length = 2024 Score = 54.7 bits (130), Expect = 8e-06 Identities = 41/117 (35%), Positives = 53/117 (45%), Gaps = 2/117 (1%) Frame = +1 Query: 1 KKDANHSMDSK-LASAISVRGKDEGRNRIRHVTENFQLDAPR-ITEGVVGDQVAERDSDR 174 +KD +H +SK A +RG+DEGR+R+R V E LD PR I EG + DQ Sbjct: 367 QKDGSHIAESKNTPGATCMRGRDEGRSRLRLVLETNHLDDPRIIDEGSLHDQ-------- 418 Query: 175 SFSRPAYQPWTDGGESPXXXXXXXXXXXXXXXXXXXWHGQDLRDRKTKCGDRNSQGR 345 Y+ DG + WHG+DLRD KTK GD + R Sbjct: 419 ---NDMYEVDADGED--------------------RWHGRDLRDLKTKFGDHDENVR 452