BLASTX nr result

ID: Cnidium21_contig00032645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032645
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE45851.1| DNA polymerase [Nicotiana tabacum]                    115   4e-24
ref|XP_002522989.1| DNA polymerase I, putative [Ricinus communis...   114   6e-24
dbj|BAE45850.1| DNA polymerase [Nicotiana tabacum]                    113   1e-23
ref|XP_002317586.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
emb|CBI20165.3| unnamed protein product [Vitis vinifera]              110   9e-23

>dbj|BAE45851.1| DNA polymerase [Nicotiana tabacum]
          Length = 1152

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/83 (71%), Positives = 66/83 (79%)
 Frame = -3

Query: 250  TTVGLARDWKVSLKEAEETVKRWYSDRKEVLNWQELRKKEAREKGHVHTLLGRARKFPSA 71
            TT+GLARDWKVS+KEA+ETV RWYSDRKEV +WQE RK EARE   VHTLLGRAR FPS 
Sbjct: 989  TTIGLARDWKVSVKEAKETVDRWYSDRKEVSDWQEQRKFEAREFRRVHTLLGRARWFPSV 1048

Query: 70   STFPSASTYAQRGHIERAAINTP 2
                  +T + +GHIERAAINTP
Sbjct: 1049 KN----ATGSVKGHIERAAINTP 1067


>ref|XP_002522989.1| DNA polymerase I, putative [Ricinus communis]
            gi|223537801|gb|EEF39419.1| DNA polymerase I, putative
            [Ricinus communis]
          Length = 963

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/83 (69%), Positives = 66/83 (79%)
 Frame = -3

Query: 250  TTVGLARDWKVSLKEAEETVKRWYSDRKEVLNWQELRKKEAREKGHVHTLLGRARKFPSA 71
            T VGLARDWKVS++EA+ETV  WY +R+EVL WQE RKKEARE G VHTLLGRAR FPS 
Sbjct: 799  TPVGLARDWKVSIEEAKETVNLWYRERQEVLKWQEARKKEAREDGRVHTLLGRARVFPSI 858

Query: 70   STFPSASTYAQRGHIERAAINTP 2
                S ++ AQ+ HIERAAINTP
Sbjct: 859  ----SHASNAQKRHIERAAINTP 877


>dbj|BAE45850.1| DNA polymerase [Nicotiana tabacum]
          Length = 1152

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/83 (69%), Positives = 65/83 (78%)
 Frame = -3

Query: 250  TTVGLARDWKVSLKEAEETVKRWYSDRKEVLNWQELRKKEAREKGHVHTLLGRARKFPSA 71
            TT+GLARDWKVS+KEA+ETV RWY DRKEV +WQE RK EARE   VHTLLGRAR FPS 
Sbjct: 989  TTIGLARDWKVSVKEAKETVDRWYRDRKEVSDWQEQRKFEAREFRRVHTLLGRARWFPSV 1048

Query: 70   STFPSASTYAQRGHIERAAINTP 2
                  +T + +GHIERAAINTP
Sbjct: 1049 KN----ATGSVKGHIERAAINTP 1067


>ref|XP_002317586.1| predicted protein [Populus trichocarpa] gi|222860651|gb|EEE98198.1|
           predicted protein [Populus trichocarpa]
          Length = 834

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/83 (67%), Positives = 64/83 (77%)
 Frame = -3

Query: 250 TTVGLARDWKVSLKEAEETVKRWYSDRKEVLNWQELRKKEAREKGHVHTLLGRARKFPSA 71
           T VGL+RDWKVS+ EA+ETV  WY +RKEVL WQ+ RKKEARE G VHTLLGRAR FPS 
Sbjct: 671 TPVGLSRDWKVSVAEAKETVNLWYKERKEVLKWQQARKKEAREDGRVHTLLGRARVFPSL 730

Query: 70  STFPSASTYAQRGHIERAAINTP 2
           +   S    + RGH+ERAAINTP
Sbjct: 731 TDASS----SLRGHVERAAINTP 749


>emb|CBI20165.3| unnamed protein product [Vitis vinifera]
          Length = 1118

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/83 (68%), Positives = 64/83 (77%)
 Frame = -3

Query: 250  TTVGLARDWKVSLKEAEETVKRWYSDRKEVLNWQELRKKEAREKGHVHTLLGRARKFPSA 71
            T VGLARDWKVS++EA ETV+RWY +RKEVL WQE RKKEA    +V TLLGRAR FPS 
Sbjct: 955  TAVGLARDWKVSVREARETVERWYKERKEVLAWQEKRKKEATTLKYVCTLLGRARSFPSV 1014

Query: 70   STFPSASTYAQRGHIERAAINTP 2
                  +T +QRGHIERAAINTP
Sbjct: 1015 ----HHATASQRGHIERAAINTP 1033


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