BLASTX nr result

ID: Cnidium21_contig00032641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032641
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517792.1| conserved hypothetical protein [Ricinus comm...    56   3e-06
ref|NP_191304.1| uncharacterized protein [Arabidopsis thaliana] ...    56   3e-06

>ref|XP_002517792.1| conserved hypothetical protein [Ricinus communis]
           gi|223543064|gb|EEF44599.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 79

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/61 (47%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
 Frame = +3

Query: 3   SHCPQTARLYYHPPA--DTHHRHLHGGVFGRVGEVSGQVGHGGSKGSMNNMDTAHVILYT 176
           SHCPQTAR+YYHPPA  D HH H  GG      + S +VG    K +M  MD    I+ +
Sbjct: 20  SHCPQTARMYYHPPANSDEHHHHHDGGSTATASDGSNRVGFCAPKAAM-RMDVKEFIICS 78

Query: 177 V 179
           V
Sbjct: 79  V 79


>ref|NP_191304.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6706416|emb|CAB66102.1| putative protein [Arabidopsis
           thaliana] gi|21537251|gb|AAM61592.1| unknown
           [Arabidopsis thaliana] gi|98961017|gb|ABF58992.1|
           At3g57450 [Arabidopsis thaliana]
           gi|332646135|gb|AEE79656.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 96

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/77 (41%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
 Frame = +3

Query: 3   SHCPQTARLYYHPPADTHHRH-----LHG------------GVFGRVGEVSGQVGHGGSK 131
           SHCPQTARLYYHPP+D HH H     L G            G+ G +G  +G  G  G K
Sbjct: 20  SHCPQTARLYYHPPSDNHHHHGGVKDLIGGGGVLGSGQNSTGLVGGLGTGTGTTGGCGIK 79

Query: 132 GSMNNMDTAHVILYTVV 182
            S    D   ++L++VV
Sbjct: 80  SSQVYDDARDLLLFSVV 96


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