BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032616
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I an...   102   2e-20
gb|AFK35687.1| unknown [Medicago truncatula]                          102   3e-20
ref|XP_003621619.1| DNA-directed RNA polymerases I and III subun...   102   3e-20
ref|XP_003600908.1| DNA-directed RNA polymerases I and III subun...   102   3e-20
gb|AFK36810.1| unknown [Lotus japonicus]                              101   5e-20

>ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2
           isoform 1 [Vitis vinifera] gi|297745971|emb|CBI16027.3|
           unnamed protein product [Vitis vinifera]
          Length = 105

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/71 (66%), Positives = 58/71 (81%)
 Frame = -2

Query: 339 PRVSFCGYSIPHPSQARVNIRVQTTGAPANEVLKDSCQDLLMICQHSRHTFSLAVQDFKN 160
           PRV+FCGYSIPHPS ARVNIRVQTTG  A EVLKD+CQDL+++CQH R TF  AV D+K 
Sbjct: 35  PRVAFCGYSIPHPSDARVNIRVQTTGDSAREVLKDACQDLMLMCQHVRSTFDKAVVDYKM 94

Query: 159 EQALKAMNMEQ 127
            + +K M++E+
Sbjct: 95  SKPVKDMSIEK 105


>gb|AFK35687.1| unknown [Medicago truncatula]
          Length = 115

 Score =  102 bits (254), Expect = 3e-20
 Identities = 44/66 (66%), Positives = 56/66 (84%)
 Frame = -2

Query: 339 PRVSFCGYSIPHPSQARVNIRVQTTGAPANEVLKDSCQDLLMICQHSRHTFSLAVQDFKN 160
           PRV+FCGYSIPHPS+ RVN+RVQTTG PA+EVLKD CQDL+++CQH R TF  AV DFK 
Sbjct: 35  PRVTFCGYSIPHPSENRVNVRVQTTGDPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKT 94

Query: 159 EQALKA 142
            +++++
Sbjct: 95  SKSVRS 100


>ref|XP_003621619.1| DNA-directed RNA polymerases I and III subunit RPAC2 [Medicago
           truncatula] gi|355496634|gb|AES77837.1| DNA-directed RNA
           polymerases I and III subunit RPAC2 [Medicago
           truncatula]
          Length = 115

 Score =  102 bits (254), Expect = 3e-20
 Identities = 44/66 (66%), Positives = 56/66 (84%)
 Frame = -2

Query: 339 PRVSFCGYSIPHPSQARVNIRVQTTGAPANEVLKDSCQDLLMICQHSRHTFSLAVQDFKN 160
           PRV+FCGYSIPHPS+ RVN+RVQTTG PA+EVLKD CQDL+++CQH R TF  AV DFK 
Sbjct: 35  PRVTFCGYSIPHPSENRVNVRVQTTGDPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKT 94

Query: 159 EQALKA 142
            +++++
Sbjct: 95  SKSVRS 100


>ref|XP_003600908.1| DNA-directed RNA polymerases I and III subunit RPAC2 [Medicago
           truncatula] gi|355489956|gb|AES71159.1| DNA-directed RNA
           polymerases I and III subunit RPAC2 [Medicago
           truncatula]
          Length = 218

 Score =  102 bits (254), Expect = 3e-20
 Identities = 44/66 (66%), Positives = 56/66 (84%)
 Frame = -2

Query: 339 PRVSFCGYSIPHPSQARVNIRVQTTGAPANEVLKDSCQDLLMICQHSRHTFSLAVQDFKN 160
           PRV+FCGYSIPHPS+ RVN+RVQTTG PA+EVLKD CQDL+++CQH R TF  AV DFK 
Sbjct: 138 PRVTFCGYSIPHPSENRVNVRVQTTGDPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKT 197

Query: 159 EQALKA 142
            +++++
Sbjct: 198 SKSVRS 203


>gb|AFK36810.1| unknown [Lotus japonicus]
          Length = 104

 Score =  101 bits (252), Expect = 5e-20
 Identities = 46/70 (65%), Positives = 57/70 (81%)
 Frame = -2

Query: 339 PRVSFCGYSIPHPSQARVNIRVQTTGAPANEVLKDSCQDLLMICQHSRHTFSLAVQDFKN 160
           PRV+FCGYSIPHPS  RVNIRVQTTG PA EVLKDSCQ ++++CQH R TF  AV DFK+
Sbjct: 35  PRVTFCGYSIPHPSDNRVNIRVQTTGEPAREVLKDSCQHMMLMCQHVRGTFDKAVNDFKS 94

Query: 159 EQALKAMNME 130
           ++  K M+++
Sbjct: 95  KKGGKDMDID 104