BLASTX nr result

ID: Cnidium21_contig00032596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032596
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622843.1| Helicase-like protein [Medicago truncatula] ...    80   2e-13
ref|XP_003614435.1| Helicase-like protein [Medicago truncatula] ...    75   7e-12
emb|CAB91581.1| putative protein [Arabidopsis thaliana]                73   3e-11
ref|XP_003595507.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    72   4e-11
ref|XP_003593180.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    69   3e-10

>ref|XP_003622843.1| Helicase-like protein [Medicago truncatula]
           gi|355497858|gb|AES79061.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1757

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +3

Query: 96  LSDEILDIGFADKICCDCGALMWRYEQTEQQRRLNSDKFSLCCGNGKVFLPLLRETPPDL 275
           L  +  DIG  D IC  CGA MW  E+  + +   +  F LCCG+GKV LPLLR+ PP L
Sbjct: 408 LLQDYFDIGDPDCICQQCGAEMWYLERKHKSKSTETPLFQLCCGDGKVQLPLLRQPPPVL 467

Query: 276 KSLL-DGTHDKSALFHKSSRLYNNAFAF 356
           K LL D   + S  F + +R+YN+ FAF
Sbjct: 468 KHLLFDQESEDSKKFQQHTRMYNSMFAF 495


>ref|XP_003614435.1| Helicase-like protein [Medicago truncatula]
           gi|355515770|gb|AES97393.1| Helicase-like protein
           [Medicago truncatula]
          Length = 936

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = +3

Query: 105 EILDIGFADKICCDCGALMWRYEQTEQQRRLNSDKFSLCCGNGKVFLPLLRETPPDLKSL 284
           +  DIG  D IC  CGA MW  E+  + +   +  F LCCGNGKV LPLLR+ P  L+ L
Sbjct: 282 DYFDIGDPDCICQQCGAEMWYLERKHKSKFTTTPLFQLCCGNGKVQLPLLRQPPSVLQHL 341

Query: 285 L-DGTHDKSALFHKSSRLYNNAFAF 356
           L D   + S  F +++R+YN+ F+F
Sbjct: 342 LFDHQSEDSKNFQQNTRMYNSMFSF 366


>emb|CAB91581.1| putative protein [Arabidopsis thaliana]
          Length = 1752

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
 Frame = +3

Query: 33  DLPELSKNMRTRIKK---KKHKFALSDEILDIGFADKICCDCGALMWRYEQTEQQRRLNS 203
           +LP+  K  R R+ K      + A     LD G A   C  CGALMW  E+  ++++  S
Sbjct: 287 NLPQPKKRGRPRLNKDTTNSAETATKSAYLDHGDATYKCNYCGALMWFAERINKKQQNKS 346

Query: 204 DKFSLCCGNGKVFLPLLRETPPDLKSLLDGTHDKSALFHKSSRLYNNAFA 353
             F+LCCG G V LPLL+++P  + +LL G    S  F ++ R+YN  FA
Sbjct: 347 PTFTLCCGKGNVKLPLLKDSPALINNLLTGDDALSRNFRENIRIYNMIFA 396


>ref|XP_003595507.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355484555|gb|AES65758.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1873

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/82 (42%), Positives = 50/82 (60%)
 Frame = +3

Query: 111 LDIGFADKICCDCGALMWRYEQTEQQRRLNSDKFSLCCGNGKVFLPLLRETPPDLKSLLD 290
           LD+G    IC DC + +W  E+ EQ     + KFSLCC  GKV LP+L + P  L +L++
Sbjct: 461 LDVGDPVVICRDCKSRVWFEERAEQDMTARNAKFSLCCMKGKVLLPILEKPPELLYNLMN 520

Query: 291 GTHDKSALFHKSSRLYNNAFAF 356
           G H KS  + ++ R YN+ F+F
Sbjct: 521 GNHAKSTNYLQNIRSYNSMFSF 542


>ref|XP_003593180.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355482228|gb|AES63431.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1626

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
 Frame = +3

Query: 111 LDIGFADKICCDCGALMWRYEQTEQQRRLN-SDKFSLCCGNGKVFLPLLRETPPDLKSLL 287
           LD+G+ +  C  C A +W  E+ E+ R  N S +FS+CC  G V +PLL ETP  L SLL
Sbjct: 212 LDLGYPEIQCKWCKAQVWIEERAEKSRPPNDSTEFSICCQKGFVDIPLLEETPKLLVSLL 271

Query: 288 DGTHDKSALFHKSSRLYNNAFAF 356
           +GT  +S  + ++ R YN+ FAF
Sbjct: 272 NGTEPRSKHYQQNIRAYNSMFAF 294


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