BLASTX nr result

ID: Cnidium21_contig00032571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032571
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76368.1| hypothetical protein VITISV_024584 [Vitis vinifera]   120   7e-25
ref|XP_003634785.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   119   2e-24
emb|CBI21817.3| unnamed protein product [Vitis vinifera]              119   2e-24
ref|XP_003546780.1| PREDICTED: translation initiation factor IF-...   114   5e-23
ref|XP_003531521.1| PREDICTED: translation initiation factor IF-...   114   5e-23

>emb|CAN76368.1| hypothetical protein VITISV_024584 [Vitis vinifera]
          Length = 1005

 Score =  120 bits (300), Expect = 7e-25
 Identities = 64/83 (77%), Positives = 72/83 (86%)
 Frame = -1

Query: 788 LQVIGLNNVPFAGDEFEVVSTHHIARERSESRADSIRLERISAKAGDGKVTLSSFASAVS 609
           +QVIGLNNVP AGDEFEVV +  IARER+E+RA+S+R ERISAKAGDGKVTLSSFASAVS
Sbjct: 717 VQVIGLNNVPIAGDEFEVVGSLDIARERAEARAESLRQERISAKAGDGKVTLSSFASAVS 776

Query: 608 SRTHTGLDLHQLVIIMKVDHQVS 540
             + +GLDLHQL IIMKVD Q S
Sbjct: 777 GGSQSGLDLHQLNIIMKVDVQGS 799


>ref|XP_003634785.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor IF-2,
           chloroplastic-like [Vitis vinifera]
          Length = 1047

 Score =  119 bits (297), Expect = 2e-24
 Identities = 63/83 (75%), Positives = 72/83 (86%)
 Frame = -1

Query: 788 LQVIGLNNVPFAGDEFEVVSTHHIARERSESRADSIRLERISAKAGDGKVTLSSFASAVS 609
           +QVIGLNNVP AGDEFEVV +  IARER+E+RA+S+R ERIS+KAGDGKVTLSSFASAVS
Sbjct: 727 VQVIGLNNVPIAGDEFEVVGSLDIARERAEARAESLRQERISSKAGDGKVTLSSFASAVS 786

Query: 608 SRTHTGLDLHQLVIIMKVDHQVS 540
             + +GLDLHQL IIMKVD Q S
Sbjct: 787 GGSQSGLDLHQLNIIMKVDVQGS 809


>emb|CBI21817.3| unnamed protein product [Vitis vinifera]
          Length = 905

 Score =  119 bits (297), Expect = 2e-24
 Identities = 63/83 (75%), Positives = 72/83 (86%)
 Frame = -1

Query: 788 LQVIGLNNVPFAGDEFEVVSTHHIARERSESRADSIRLERISAKAGDGKVTLSSFASAVS 609
           +QVIGLNNVP AGDEFEVV +  IARER+E+RA+S+R ERIS+KAGDGKVTLSSFASAVS
Sbjct: 617 VQVIGLNNVPIAGDEFEVVGSLDIARERAEARAESLRQERISSKAGDGKVTLSSFASAVS 676

Query: 608 SRTHTGLDLHQLVIIMKVDHQVS 540
             + +GLDLHQL IIMKVD Q S
Sbjct: 677 GGSQSGLDLHQLNIIMKVDVQGS 699


>ref|XP_003546780.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
            [Glycine max]
          Length = 1015

 Score =  114 bits (284), Expect = 5e-23
 Identities = 67/119 (56%), Positives = 82/119 (68%)
 Frame = -1

Query: 788  LQVIGLNNVPFAGDEFEVVSTHHIARERSESRADSIRLERISAKAGDGKVTLSSFASAVS 609
            +QVIGLNNVP AGDEFEV+ +   ARER+E+RA+S+R ERISAKAGDGKVTLSS ASAVS
Sbjct: 727  VQVIGLNNVPIAGDEFEVIESLDTARERAETRAESLRNERISAKAGDGKVTLSSLASAVS 786

Query: 608  SRTHTGLDLHQLVIIMKVDHQVSALNVSGKNLMLRLVRMEQKASKYKTEY*CDLLTKGV 432
            S   +GLDLHQL II+KVD Q S   +      L ++  +    K+  E   D+ T  V
Sbjct: 787  SGKLSGLDLHQLNIILKVDLQGS---IEAVRKALEILPQDNVTLKFLLEATGDVSTSDV 842


>ref|XP_003531521.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
           [Glycine max]
          Length = 1010

 Score =  114 bits (284), Expect = 5e-23
 Identities = 62/83 (74%), Positives = 70/83 (84%)
 Frame = -1

Query: 788 LQVIGLNNVPFAGDEFEVVSTHHIARERSESRADSIRLERISAKAGDGKVTLSSFASAVS 609
           +QVIGLNNVP AGDEFEVV +   ARER+E+RA+S+R ERISAKAGDGKVTLSS ASAVS
Sbjct: 722 VQVIGLNNVPIAGDEFEVVESLDTARERAEARAESLRNERISAKAGDGKVTLSSLASAVS 781

Query: 608 SRTHTGLDLHQLVIIMKVDHQVS 540
           S   +GLDLHQL II+KVD Q S
Sbjct: 782 SGKLSGLDLHQLNIILKVDLQGS 804


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