BLASTX nr result

ID: Cnidium21_contig00032553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032553
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60108.1| hypothetical protein VITISV_044328 [Vitis vinifera]    62   6e-08
emb|CBI30404.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_002528119.1| catalytic, putative [Ricinus communis] gi|22...    60   1e-07
ref|XP_002322974.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,...    55   5e-06

>emb|CAN60108.1| hypothetical protein VITISV_044328 [Vitis vinifera]
          Length = 430

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
 Frame = -1

Query: 471 DRILQTWETENTITISEDWESADCQKILEEPIFNQIEESIIN------AEDITEPNKQVH 310
           DRIL+TW TENTIT+ EDWE A+ QKI E P+    EE +IN      AED+T   K  H
Sbjct: 135 DRILRTWATENTITVVEDWEDAELQKITEGPVSILNEEPVINSDTLIAAEDVT-XTKXAH 193

Query: 309 IDKSN 295
           +   N
Sbjct: 194 JSDXN 198


>emb|CBI30404.3| unnamed protein product [Vitis vinifera]
          Length = 382

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
 Frame = -1

Query: 471 DRILQTWETENTITISEDWESADCQKILEEPIFNQIEESIIN------AEDITEPNKQVH 310
           DRIL+TW TENTIT+ EDWE A+ QKI E P+    EE +IN      AED+T   K  H
Sbjct: 159 DRILRTWATENTITVVEDWEDAELQKITEGPVSILNEEPVINSDTLIAAEDVTR-TKYAH 217

Query: 309 IDKSN 295
           +   N
Sbjct: 218 LSDIN 222


>ref|XP_002528119.1| catalytic, putative [Ricinus communis] gi|223532508|gb|EEF34298.1|
           catalytic, putative [Ricinus communis]
          Length = 323

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = -1

Query: 471 DRILQTWETENTITISEDWESADCQKIL-EEPIFNQIEESIINAEDITEPNKQVHIDKSN 295
           DR+L+TWET NTI + EDWE A  QK+L EEP  NQ EE   N+E +        + ++ 
Sbjct: 96  DRVLKTWETNNTIVVCEDWEDATFQKLLEEEPNCNQNEEPTDNSEMLIVAENLTIVSENL 155

Query: 294 TIHSRGLVSNV 262
           T+ +   V+NV
Sbjct: 156 TVQNEEFVANV 166


>ref|XP_002322974.1| predicted protein [Populus trichocarpa] gi|222867604|gb|EEF04735.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
 Frame = -1

Query: 471 DRILQTWETENTITISEDWESADCQKIL-EEPIFNQIEESIIN------AEDITEPNKQV 313
           DRIL TWET NTI + EDWE A  QKI  EEP  N  EE ++N      AE++T   ++V
Sbjct: 174 DRILPTWETSNTIVVWEDWEDAALQKITEEEPSANGSEEPVVNPESLIVAENLTCQKEEV 233

Query: 312 HIDKSN 295
             D SN
Sbjct: 234 VSDMSN 239


>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 765

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
 Frame = -1

Query: 471 DRILQTWETENTITISEDWESADCQKILEEPIFNQIEESI--INAEDITEPNKQVHIDKS 298
           DRI ++WE+  TI ISEDWE+++ QKI+EE + + I   +   +AE+IT  ++ +  + +
Sbjct: 620 DRIFKSWESNGTIIISEDWENSEAQKIMEEKMESVINHDLTPTDAENITNQSEGLLANMN 679

Query: 297 NTIHSRGLVSNVKESLAVISDEDI 226
           N I   G V+  +E L  I D ++
Sbjct: 680 NDIMFSGNVAFAEEKL--IDDNEL 701


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