BLASTX nr result

ID: Cnidium21_contig00032548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032548
         (1429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168692.1| PREDICTED: pentatricopeptide repeat-containi...   453   e-125
ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containi...   453   e-125
ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containi...   447   e-123
emb|CBI32673.3| unnamed protein product [Vitis vinifera]              447   e-123
emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]   447   e-123

>ref|XP_004168692.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
            mitochondrial-like [Cucumis sativus]
          Length = 516

 Score =  453 bits (1165), Expect = e-125
 Identities = 215/313 (68%), Positives = 265/313 (84%), Gaps = 1/313 (0%)
 Frame = -2

Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
            +SQKGHNE+AV+LFI+MLRE + P Q TFPCAI AAANI  IG+GRSFHACA+K  G++D
Sbjct: 202  FSQKGHNEDAVHLFIDMLREGILPTQSTFPCAICAAANIASIGIGRSFHACAVKFFGKLD 261

Query: 1245 VFVANSLISFYAKCGSMDDSLLVFNKL-PEKNVVSWNALICGFAQNGKGKEALHFYDKMQ 1069
            VFV+NSLISFYAKCGSM+DSLLVFNKL  E+NVVSWNA++ GFAQNG+GKEA+ FY +M 
Sbjct: 262  VFVSNSLISFYAKCGSMEDSLLVFNKLLDERNVVSWNAVLSGFAQNGRGKEAIDFYQRMI 321

Query: 1068 SSDLKPDSVTLLGILFACNHAGLVNEGHFYFNPARLQDPVMLKPEHYSCMVDLLSRSGRF 889
             +  KP++VT L +L+ACNHAGLV+EG+ YFN ARL +P +LK EHY+CMVDLLSRSG+F
Sbjct: 322  LAGCKPNAVTFLSLLWACNHAGLVDEGYSYFNQARLDNPNLLKAEHYACMVDLLSRSGQF 381

Query: 888  VEAEKFIEDLPFDPGVGFWKALLGGCQIHSNMELGEFAAQKILALDPEDVSSYVLLSNAH 709
              AE+FI DLPFDPG+GFWKALLGGCQIHSN+ELGE AAQ+ILALDP DVSSYV++SNAH
Sbjct: 382  KRAEEFIHDLPFDPGIGFWKALLGGCQIHSNVELGELAAQRILALDPGDVSSYVMMSNAH 441

Query: 708  SAAERWQNVSIVRHKMIEKGLQRVPGCSWIEMQSRIHVFVTRDEKHDQSDEIYMLLWIFL 529
            SAA +W +VSI+R +M EKGL+R+PGCSWIE++S++HVFVT D+ H Q DEIY  L  F+
Sbjct: 442  SAAGKWHSVSILRREMKEKGLKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEIYSALKFFV 501

Query: 528  KHATDSQNLLCLS 490
            +H  + ++   LS
Sbjct: 502  EHLKEREDFNFLS 514



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 32/256 (12%)
 Frame = -2

Query: 1428 RYSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRI 1249
            R +++  +EEA++LF  ML  +L+PN+ TF   I +A  +  I +G+  H CAIK     
Sbjct: 69   RCARQHQHEEALSLFSAMLVLNLRPNEFTFGTVIQSAKALGDIHIGKQLHVCAIKTGLHS 128

Query: 1248 DVFVANSLISFYAKCGSMD-------------------------------DSLLVFNKLP 1162
            ++FV ++L+  Y K G ++                               D+L VF+++P
Sbjct: 129  NLFVGSALLDLYVKVGVIEEAQRAFEDIKMPNVVSYTSLISGYLKIERIRDALRVFDEMP 188

Query: 1161 EKNVVSWNALICGFAQNGKGKEALHFYDKMQSSDLKPDSVTLLGILFACNHAGLVNEGHF 982
            E+NVVSWN++I GF+Q G  ++A+H +  M    + P   T    + A  +   +  G  
Sbjct: 189  ERNVVSWNSMIGGFSQKGHNEDAVHLFIDMLREGILPTQSTFPCAICAAANIASIGIGR- 247

Query: 981  YFNPARLQDPVMLKPEHYSCMVDLLSRSGRFVEAEKFIEDLPFDPGVGFWKALLGG-CQI 805
             F+   ++    L     + ++   ++ G   ++      L  +  V  W A+L G  Q 
Sbjct: 248  SFHACAVKFFGKLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDERNVVSWNAVLSGFAQN 307

Query: 804  HSNMELGEFAAQKILA 757
                E  +F  + ILA
Sbjct: 308  GRGKEAIDFYQRMILA 323


>ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
            mitochondrial-like [Cucumis sativus]
          Length = 516

 Score =  453 bits (1165), Expect = e-125
 Identities = 215/313 (68%), Positives = 265/313 (84%), Gaps = 1/313 (0%)
 Frame = -2

Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
            +SQKGHNE+AV+LFI+MLRE + P Q TFPCAI AAANI  IG+GRSFHACA+K  G++D
Sbjct: 202  FSQKGHNEDAVHLFIDMLREGILPTQSTFPCAICAAANIASIGIGRSFHACAVKFFGKLD 261

Query: 1245 VFVANSLISFYAKCGSMDDSLLVFNKL-PEKNVVSWNALICGFAQNGKGKEALHFYDKMQ 1069
            VFV+NSLISFYAKCGSM+DSLLVFNKL  E+NVVSWNA++ GFAQNG+GKEA+ FY +M 
Sbjct: 262  VFVSNSLISFYAKCGSMEDSLLVFNKLLDERNVVSWNAVLSGFAQNGRGKEAIDFYQRMI 321

Query: 1068 SSDLKPDSVTLLGILFACNHAGLVNEGHFYFNPARLQDPVMLKPEHYSCMVDLLSRSGRF 889
             +  KP++VT L +L+ACNHAGLV+EG+ YFN ARL +P +LK EHY+CMVDLLSRSG+F
Sbjct: 322  LAGCKPNAVTFLSLLWACNHAGLVDEGYSYFNQARLDNPNLLKAEHYACMVDLLSRSGQF 381

Query: 888  VEAEKFIEDLPFDPGVGFWKALLGGCQIHSNMELGEFAAQKILALDPEDVSSYVLLSNAH 709
              AE+FI DLPFDPG+GFWKALLGGCQIHSN+ELGE AAQ+ILALDP DVSSYV++SNAH
Sbjct: 382  KRAEEFIHDLPFDPGIGFWKALLGGCQIHSNVELGELAAQRILALDPGDVSSYVMMSNAH 441

Query: 708  SAAERWQNVSIVRHKMIEKGLQRVPGCSWIEMQSRIHVFVTRDEKHDQSDEIYMLLWIFL 529
            SAA +W +VSI+R +M EKGL+R+PGCSWIE++S++HVFVT D+ H Q DEIY  L  F+
Sbjct: 442  SAAGKWHSVSILRREMKEKGLKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEIYSALKFFV 501

Query: 528  KHATDSQNLLCLS 490
            +H  + ++   LS
Sbjct: 502  EHLKEREDFNFLS 514



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 32/256 (12%)
 Frame = -2

Query: 1428 RYSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRI 1249
            R +++  +EEA++LF  ML  +L+PN+ TF   I +   +  I +G+  H CAIK     
Sbjct: 69   RCARQHQHEEALSLFSAMLVLNLRPNEFTFGTVIQSPKALGDIHIGKQLHVCAIKTGLHS 128

Query: 1248 DVFVANSLISFYAKCGSMD-------------------------------DSLLVFNKLP 1162
            +VFV ++L+  Y K G ++                               D+L VF+++P
Sbjct: 129  NVFVGSALLDLYVKVGVIEEAQRAFEDIKMPNVVSYTSLISGYLKIERIRDALRVFDEMP 188

Query: 1161 EKNVVSWNALICGFAQNGKGKEALHFYDKMQSSDLKPDSVTLLGILFACNHAGLVNEGHF 982
            E+NVVSWN++I GF+Q G  ++A+H +  M    + P   T    + A  +   +  G  
Sbjct: 189  ERNVVSWNSMIGGFSQKGHNEDAVHLFIDMLREGILPTQSTFPCAICAAANIASIGIGR- 247

Query: 981  YFNPARLQDPVMLKPEHYSCMVDLLSRSGRFVEAEKFIEDLPFDPGVGFWKALLGG-CQI 805
             F+   ++    L     + ++   ++ G   ++      L  +  V  W A+L G  Q 
Sbjct: 248  SFHACAVKFFGKLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDERNVVSWNAVLSGFAQN 307

Query: 804  HSNMELGEFAAQKILA 757
                E  +F  + ILA
Sbjct: 308  GRGKEAIDFYQRMILA 323


>ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
            mitochondrial-like [Vitis vinifera]
          Length = 538

 Score =  447 bits (1149), Expect = e-123
 Identities = 206/308 (66%), Positives = 262/308 (85%)
 Frame = -2

Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
            YSQ G+NEEAVNLF+ MLRE   PN+ TFPCAI A ANI  +GMGRSFH  A+K LG+ D
Sbjct: 218  YSQMGYNEEAVNLFVVMLREGTLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFD 277

Query: 1245 VFVANSLISFYAKCGSMDDSLLVFNKLPEKNVVSWNALICGFAQNGKGKEALHFYDKMQS 1066
            VF+ NSL+SFYAKCGSM++SLLVFN LP+KN+VSWNALICG+A +G+G EA++F++KMQ 
Sbjct: 278  VFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQD 337

Query: 1065 SDLKPDSVTLLGILFACNHAGLVNEGHFYFNPARLQDPVMLKPEHYSCMVDLLSRSGRFV 886
            + L+P+SVTLLG+L ACNH+GLV++G+ YFN AR+++P +L PEH++CMVDLLSRSGRF 
Sbjct: 338  TGLRPNSVTLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFK 397

Query: 885  EAEKFIEDLPFDPGVGFWKALLGGCQIHSNMELGEFAAQKILALDPEDVSSYVLLSNAHS 706
            EAEKF+ +LPF PG+GFWKALLGGC+IHSNMELGE AA+KILALDPEDVSSYV+LSNAHS
Sbjct: 398  EAEKFLHELPFVPGIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHS 457

Query: 705  AAERWQNVSIVRHKMIEKGLQRVPGCSWIEMQSRIHVFVTRDEKHDQSDEIYMLLWIFLK 526
            AA RWQ+VS++R +M EK ++ VPG SWIE++S++H+FVT D  HDQ DEIY +L   ++
Sbjct: 458  AAGRWQSVSMIRKEMREKRMKGVPGSSWIEIRSKVHIFVTGDRNHDQHDEIYQVLGFCIQ 517

Query: 525  HATDSQNL 502
            H  ++ +L
Sbjct: 518  HLRETYSL 525



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 31/175 (17%)
 Frame = -2

Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
            +++  H+EEA+  F  ML  ++KPNQ +F   I ++  +  +  GR  HACAIK     +
Sbjct: 86   FARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSSTALQDLNSGRQLHACAIKMGLESN 145

Query: 1245 VFVANSLISFYAKCGSM-------------------------------DDSLLVFNKLPE 1159
            VFV ++++ FYAK  S+                               DD+L +F K+PE
Sbjct: 146  VFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPE 205

Query: 1158 KNVVSWNALICGFAQNGKGKEALHFYDKMQSSDLKPDSVTLLGILFACNHAGLVN 994
            +NVVSWNA+I G++Q G  +EA++ +  M      P+  T     F C  + + N
Sbjct: 206  RNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERT-----FPCAISAVAN 255


>emb|CBI32673.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  447 bits (1149), Expect = e-123
 Identities = 206/308 (66%), Positives = 262/308 (85%)
 Frame = -2

Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
            YSQ G+NEEAVNLF+ MLRE   PN+ TFPCAI A ANI  +GMGRSFH  A+K LG+ D
Sbjct: 499  YSQMGYNEEAVNLFVVMLREGTLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFD 558

Query: 1245 VFVANSLISFYAKCGSMDDSLLVFNKLPEKNVVSWNALICGFAQNGKGKEALHFYDKMQS 1066
            VF+ NSL+SFYAKCGSM++SLLVFN LP+KN+VSWNALICG+A +G+G EA++F++KMQ 
Sbjct: 559  VFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQD 618

Query: 1065 SDLKPDSVTLLGILFACNHAGLVNEGHFYFNPARLQDPVMLKPEHYSCMVDLLSRSGRFV 886
            + L+P+SVTLLG+L ACNH+GLV++G+ YFN AR+++P +L PEH++CMVDLLSRSGRF 
Sbjct: 619  TGLRPNSVTLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFK 678

Query: 885  EAEKFIEDLPFDPGVGFWKALLGGCQIHSNMELGEFAAQKILALDPEDVSSYVLLSNAHS 706
            EAEKF+ +LPF PG+GFWKALLGGC+IHSNMELGE AA+KILALDPEDVSSYV+LSNAHS
Sbjct: 679  EAEKFLHELPFVPGIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHS 738

Query: 705  AAERWQNVSIVRHKMIEKGLQRVPGCSWIEMQSRIHVFVTRDEKHDQSDEIYMLLWIFLK 526
            AA RWQ+VS++R +M EK ++ VPG SWIE++S++H+FVT D  HDQ DEIY +L   ++
Sbjct: 739  AAGRWQSVSMIRKEMREKRMKGVPGSSWIEIRSKVHIFVTGDRNHDQHDEIYQVLGFCIQ 798

Query: 525  HATDSQNL 502
            H  ++ +L
Sbjct: 799  HLRETYSL 806



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 31/175 (17%)
 Frame = -2

Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
            +++  H+EEA+  F  ML  ++KPNQ +F   I ++  +  +  GR  HACAIK     +
Sbjct: 367  FARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSSTALQDLNSGRQLHACAIKMGLESN 426

Query: 1245 VFVANSLISFYAKCGSM-------------------------------DDSLLVFNKLPE 1159
            VFV ++++ FYAK  S+                               DD+L +F K+PE
Sbjct: 427  VFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPE 486

Query: 1158 KNVVSWNALICGFAQNGKGKEALHFYDKMQSSDLKPDSVTLLGILFACNHAGLVN 994
            +NVVSWNA+I G++Q G  +EA++ +  M      P+  T     F C  + + N
Sbjct: 487  RNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERT-----FPCAISAVAN 536


>emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]
          Length = 795

 Score =  447 bits (1149), Expect = e-123
 Identities = 206/308 (66%), Positives = 262/308 (85%)
 Frame = -2

Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
            YSQ G+NEEAVNLF+ MLRE   PN+ TFPCAI A ANI  +GMGRSFH  A+K LG+ D
Sbjct: 475  YSQMGYNEEAVNLFVVMLREGXLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFD 534

Query: 1245 VFVANSLISFYAKCGSMDDSLLVFNKLPEKNVVSWNALICGFAQNGKGKEALHFYDKMQS 1066
            VF+ NSL+SFYAKCGSM++SLLVFN LP+KN+VSWNALICG+A +G+G EA++F++KMQ 
Sbjct: 535  VFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQD 594

Query: 1065 SDLKPDSVTLLGILFACNHAGLVNEGHFYFNPARLQDPVMLKPEHYSCMVDLLSRSGRFV 886
            + L+P+SVTLLG+L ACNH+GLV++G+ YFN AR+++P +L PEH++CMVDLLSRSGRF 
Sbjct: 595  TGLRPNSVTLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFK 654

Query: 885  EAEKFIEDLPFDPGVGFWKALLGGCQIHSNMELGEFAAQKILALDPEDVSSYVLLSNAHS 706
            EAEKF+ +LPF PG+GFWKALLGGC+IHSNMELGE AA+KILALDPEDVSSYV+LSNAHS
Sbjct: 655  EAEKFLHELPFVPGIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHS 714

Query: 705  AAERWQNVSIVRHKMIEKGLQRVPGCSWIEMQSRIHVFVTRDEKHDQSDEIYMLLWIFLK 526
            AA RWQ+VS++R +M EK ++ VPG SWIE++S++H+FVT D  HDQ DEIY +L   ++
Sbjct: 715  AAGRWQSVSMIRKEMREKRMKGVPGSSWIEIRSKVHIFVTGDRNHDQHDEIYQVLGFCIQ 774

Query: 525  HATDSQNL 502
            H  ++ +L
Sbjct: 775  HLRETYSL 782



 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 31/175 (17%)
 Frame = -2

Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
            +++  H+EEA+  F  ML  ++KPNQ +F   I +A  +  +  GR  HACAIK     +
Sbjct: 343  FARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSATALQDLNSGRQLHACAIKMGLESN 402

Query: 1245 VFVANSLISFYAKCGSM-------------------------------DDSLLVFNKLPE 1159
            VFV ++++ FYAK  S+                               DD+L +F  +PE
Sbjct: 403  VFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRXMPE 462

Query: 1158 KNVVSWNALICGFAQNGKGKEALHFYDKMQSSDLKPDSVTLLGILFACNHAGLVN 994
            +NVVSWNA+I G++Q G  +EA++ +  M      P+  T     F C  + + N
Sbjct: 463  RNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGXLPNERT-----FPCAISAVAN 512


Top