BLASTX nr result
ID: Cnidium21_contig00032548
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00032548
(1429 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004168692.1| PREDICTED: pentatricopeptide repeat-containi... 453 e-125
ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containi... 453 e-125
ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containi... 447 e-123
emb|CBI32673.3| unnamed protein product [Vitis vinifera] 447 e-123
emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera] 447 e-123
>ref|XP_004168692.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Cucumis sativus]
Length = 516
Score = 453 bits (1165), Expect = e-125
Identities = 215/313 (68%), Positives = 265/313 (84%), Gaps = 1/313 (0%)
Frame = -2
Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
+SQKGHNE+AV+LFI+MLRE + P Q TFPCAI AAANI IG+GRSFHACA+K G++D
Sbjct: 202 FSQKGHNEDAVHLFIDMLREGILPTQSTFPCAICAAANIASIGIGRSFHACAVKFFGKLD 261
Query: 1245 VFVANSLISFYAKCGSMDDSLLVFNKL-PEKNVVSWNALICGFAQNGKGKEALHFYDKMQ 1069
VFV+NSLISFYAKCGSM+DSLLVFNKL E+NVVSWNA++ GFAQNG+GKEA+ FY +M
Sbjct: 262 VFVSNSLISFYAKCGSMEDSLLVFNKLLDERNVVSWNAVLSGFAQNGRGKEAIDFYQRMI 321
Query: 1068 SSDLKPDSVTLLGILFACNHAGLVNEGHFYFNPARLQDPVMLKPEHYSCMVDLLSRSGRF 889
+ KP++VT L +L+ACNHAGLV+EG+ YFN ARL +P +LK EHY+CMVDLLSRSG+F
Sbjct: 322 LAGCKPNAVTFLSLLWACNHAGLVDEGYSYFNQARLDNPNLLKAEHYACMVDLLSRSGQF 381
Query: 888 VEAEKFIEDLPFDPGVGFWKALLGGCQIHSNMELGEFAAQKILALDPEDVSSYVLLSNAH 709
AE+FI DLPFDPG+GFWKALLGGCQIHSN+ELGE AAQ+ILALDP DVSSYV++SNAH
Sbjct: 382 KRAEEFIHDLPFDPGIGFWKALLGGCQIHSNVELGELAAQRILALDPGDVSSYVMMSNAH 441
Query: 708 SAAERWQNVSIVRHKMIEKGLQRVPGCSWIEMQSRIHVFVTRDEKHDQSDEIYMLLWIFL 529
SAA +W +VSI+R +M EKGL+R+PGCSWIE++S++HVFVT D+ H Q DEIY L F+
Sbjct: 442 SAAGKWHSVSILRREMKEKGLKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEIYSALKFFV 501
Query: 528 KHATDSQNLLCLS 490
+H + ++ LS
Sbjct: 502 EHLKEREDFNFLS 514
Score = 86.7 bits (213), Expect = 1e-14
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 32/256 (12%)
Frame = -2
Query: 1428 RYSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRI 1249
R +++ +EEA++LF ML +L+PN+ TF I +A + I +G+ H CAIK
Sbjct: 69 RCARQHQHEEALSLFSAMLVLNLRPNEFTFGTVIQSAKALGDIHIGKQLHVCAIKTGLHS 128
Query: 1248 DVFVANSLISFYAKCGSMD-------------------------------DSLLVFNKLP 1162
++FV ++L+ Y K G ++ D+L VF+++P
Sbjct: 129 NLFVGSALLDLYVKVGVIEEAQRAFEDIKMPNVVSYTSLISGYLKIERIRDALRVFDEMP 188
Query: 1161 EKNVVSWNALICGFAQNGKGKEALHFYDKMQSSDLKPDSVTLLGILFACNHAGLVNEGHF 982
E+NVVSWN++I GF+Q G ++A+H + M + P T + A + + G
Sbjct: 189 ERNVVSWNSMIGGFSQKGHNEDAVHLFIDMLREGILPTQSTFPCAICAAANIASIGIGR- 247
Query: 981 YFNPARLQDPVMLKPEHYSCMVDLLSRSGRFVEAEKFIEDLPFDPGVGFWKALLGG-CQI 805
F+ ++ L + ++ ++ G ++ L + V W A+L G Q
Sbjct: 248 SFHACAVKFFGKLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDERNVVSWNAVLSGFAQN 307
Query: 804 HSNMELGEFAAQKILA 757
E +F + ILA
Sbjct: 308 GRGKEAIDFYQRMILA 323
>ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Cucumis sativus]
Length = 516
Score = 453 bits (1165), Expect = e-125
Identities = 215/313 (68%), Positives = 265/313 (84%), Gaps = 1/313 (0%)
Frame = -2
Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
+SQKGHNE+AV+LFI+MLRE + P Q TFPCAI AAANI IG+GRSFHACA+K G++D
Sbjct: 202 FSQKGHNEDAVHLFIDMLREGILPTQSTFPCAICAAANIASIGIGRSFHACAVKFFGKLD 261
Query: 1245 VFVANSLISFYAKCGSMDDSLLVFNKL-PEKNVVSWNALICGFAQNGKGKEALHFYDKMQ 1069
VFV+NSLISFYAKCGSM+DSLLVFNKL E+NVVSWNA++ GFAQNG+GKEA+ FY +M
Sbjct: 262 VFVSNSLISFYAKCGSMEDSLLVFNKLLDERNVVSWNAVLSGFAQNGRGKEAIDFYQRMI 321
Query: 1068 SSDLKPDSVTLLGILFACNHAGLVNEGHFYFNPARLQDPVMLKPEHYSCMVDLLSRSGRF 889
+ KP++VT L +L+ACNHAGLV+EG+ YFN ARL +P +LK EHY+CMVDLLSRSG+F
Sbjct: 322 LAGCKPNAVTFLSLLWACNHAGLVDEGYSYFNQARLDNPNLLKAEHYACMVDLLSRSGQF 381
Query: 888 VEAEKFIEDLPFDPGVGFWKALLGGCQIHSNMELGEFAAQKILALDPEDVSSYVLLSNAH 709
AE+FI DLPFDPG+GFWKALLGGCQIHSN+ELGE AAQ+ILALDP DVSSYV++SNAH
Sbjct: 382 KRAEEFIHDLPFDPGIGFWKALLGGCQIHSNVELGELAAQRILALDPGDVSSYVMMSNAH 441
Query: 708 SAAERWQNVSIVRHKMIEKGLQRVPGCSWIEMQSRIHVFVTRDEKHDQSDEIYMLLWIFL 529
SAA +W +VSI+R +M EKGL+R+PGCSWIE++S++HVFVT D+ H Q DEIY L F+
Sbjct: 442 SAAGKWHSVSILRREMKEKGLKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEIYSALKFFV 501
Query: 528 KHATDSQNLLCLS 490
+H + ++ LS
Sbjct: 502 EHLKEREDFNFLS 514
Score = 85.9 bits (211), Expect = 2e-14
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 32/256 (12%)
Frame = -2
Query: 1428 RYSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRI 1249
R +++ +EEA++LF ML +L+PN+ TF I + + I +G+ H CAIK
Sbjct: 69 RCARQHQHEEALSLFSAMLVLNLRPNEFTFGTVIQSPKALGDIHIGKQLHVCAIKTGLHS 128
Query: 1248 DVFVANSLISFYAKCGSMD-------------------------------DSLLVFNKLP 1162
+VFV ++L+ Y K G ++ D+L VF+++P
Sbjct: 129 NVFVGSALLDLYVKVGVIEEAQRAFEDIKMPNVVSYTSLISGYLKIERIRDALRVFDEMP 188
Query: 1161 EKNVVSWNALICGFAQNGKGKEALHFYDKMQSSDLKPDSVTLLGILFACNHAGLVNEGHF 982
E+NVVSWN++I GF+Q G ++A+H + M + P T + A + + G
Sbjct: 189 ERNVVSWNSMIGGFSQKGHNEDAVHLFIDMLREGILPTQSTFPCAICAAANIASIGIGR- 247
Query: 981 YFNPARLQDPVMLKPEHYSCMVDLLSRSGRFVEAEKFIEDLPFDPGVGFWKALLGG-CQI 805
F+ ++ L + ++ ++ G ++ L + V W A+L G Q
Sbjct: 248 SFHACAVKFFGKLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDERNVVSWNAVLSGFAQN 307
Query: 804 HSNMELGEFAAQKILA 757
E +F + ILA
Sbjct: 308 GRGKEAIDFYQRMILA 323
>ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Vitis vinifera]
Length = 538
Score = 447 bits (1149), Expect = e-123
Identities = 206/308 (66%), Positives = 262/308 (85%)
Frame = -2
Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
YSQ G+NEEAVNLF+ MLRE PN+ TFPCAI A ANI +GMGRSFH A+K LG+ D
Sbjct: 218 YSQMGYNEEAVNLFVVMLREGTLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFD 277
Query: 1245 VFVANSLISFYAKCGSMDDSLLVFNKLPEKNVVSWNALICGFAQNGKGKEALHFYDKMQS 1066
VF+ NSL+SFYAKCGSM++SLLVFN LP+KN+VSWNALICG+A +G+G EA++F++KMQ
Sbjct: 278 VFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQD 337
Query: 1065 SDLKPDSVTLLGILFACNHAGLVNEGHFYFNPARLQDPVMLKPEHYSCMVDLLSRSGRFV 886
+ L+P+SVTLLG+L ACNH+GLV++G+ YFN AR+++P +L PEH++CMVDLLSRSGRF
Sbjct: 338 TGLRPNSVTLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFK 397
Query: 885 EAEKFIEDLPFDPGVGFWKALLGGCQIHSNMELGEFAAQKILALDPEDVSSYVLLSNAHS 706
EAEKF+ +LPF PG+GFWKALLGGC+IHSNMELGE AA+KILALDPEDVSSYV+LSNAHS
Sbjct: 398 EAEKFLHELPFVPGIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHS 457
Query: 705 AAERWQNVSIVRHKMIEKGLQRVPGCSWIEMQSRIHVFVTRDEKHDQSDEIYMLLWIFLK 526
AA RWQ+VS++R +M EK ++ VPG SWIE++S++H+FVT D HDQ DEIY +L ++
Sbjct: 458 AAGRWQSVSMIRKEMREKRMKGVPGSSWIEIRSKVHIFVTGDRNHDQHDEIYQVLGFCIQ 517
Query: 525 HATDSQNL 502
H ++ +L
Sbjct: 518 HLRETYSL 525
Score = 90.1 bits (222), Expect = 1e-15
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 31/175 (17%)
Frame = -2
Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
+++ H+EEA+ F ML ++KPNQ +F I ++ + + GR HACAIK +
Sbjct: 86 FARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSSTALQDLNSGRQLHACAIKMGLESN 145
Query: 1245 VFVANSLISFYAKCGSM-------------------------------DDSLLVFNKLPE 1159
VFV ++++ FYAK S+ DD+L +F K+PE
Sbjct: 146 VFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPE 205
Query: 1158 KNVVSWNALICGFAQNGKGKEALHFYDKMQSSDLKPDSVTLLGILFACNHAGLVN 994
+NVVSWNA+I G++Q G +EA++ + M P+ T F C + + N
Sbjct: 206 RNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERT-----FPCAISAVAN 255
>emb|CBI32673.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 447 bits (1149), Expect = e-123
Identities = 206/308 (66%), Positives = 262/308 (85%)
Frame = -2
Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
YSQ G+NEEAVNLF+ MLRE PN+ TFPCAI A ANI +GMGRSFH A+K LG+ D
Sbjct: 499 YSQMGYNEEAVNLFVVMLREGTLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFD 558
Query: 1245 VFVANSLISFYAKCGSMDDSLLVFNKLPEKNVVSWNALICGFAQNGKGKEALHFYDKMQS 1066
VF+ NSL+SFYAKCGSM++SLLVFN LP+KN+VSWNALICG+A +G+G EA++F++KMQ
Sbjct: 559 VFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQD 618
Query: 1065 SDLKPDSVTLLGILFACNHAGLVNEGHFYFNPARLQDPVMLKPEHYSCMVDLLSRSGRFV 886
+ L+P+SVTLLG+L ACNH+GLV++G+ YFN AR+++P +L PEH++CMVDLLSRSGRF
Sbjct: 619 TGLRPNSVTLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFK 678
Query: 885 EAEKFIEDLPFDPGVGFWKALLGGCQIHSNMELGEFAAQKILALDPEDVSSYVLLSNAHS 706
EAEKF+ +LPF PG+GFWKALLGGC+IHSNMELGE AA+KILALDPEDVSSYV+LSNAHS
Sbjct: 679 EAEKFLHELPFVPGIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHS 738
Query: 705 AAERWQNVSIVRHKMIEKGLQRVPGCSWIEMQSRIHVFVTRDEKHDQSDEIYMLLWIFLK 526
AA RWQ+VS++R +M EK ++ VPG SWIE++S++H+FVT D HDQ DEIY +L ++
Sbjct: 739 AAGRWQSVSMIRKEMREKRMKGVPGSSWIEIRSKVHIFVTGDRNHDQHDEIYQVLGFCIQ 798
Query: 525 HATDSQNL 502
H ++ +L
Sbjct: 799 HLRETYSL 806
Score = 90.1 bits (222), Expect = 1e-15
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 31/175 (17%)
Frame = -2
Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
+++ H+EEA+ F ML ++KPNQ +F I ++ + + GR HACAIK +
Sbjct: 367 FARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSSTALQDLNSGRQLHACAIKMGLESN 426
Query: 1245 VFVANSLISFYAKCGSM-------------------------------DDSLLVFNKLPE 1159
VFV ++++ FYAK S+ DD+L +F K+PE
Sbjct: 427 VFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPE 486
Query: 1158 KNVVSWNALICGFAQNGKGKEALHFYDKMQSSDLKPDSVTLLGILFACNHAGLVN 994
+NVVSWNA+I G++Q G +EA++ + M P+ T F C + + N
Sbjct: 487 RNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERT-----FPCAISAVAN 536
>emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]
Length = 795
Score = 447 bits (1149), Expect = e-123
Identities = 206/308 (66%), Positives = 262/308 (85%)
Frame = -2
Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
YSQ G+NEEAVNLF+ MLRE PN+ TFPCAI A ANI +GMGRSFH A+K LG+ D
Sbjct: 475 YSQMGYNEEAVNLFVVMLREGXLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFD 534
Query: 1245 VFVANSLISFYAKCGSMDDSLLVFNKLPEKNVVSWNALICGFAQNGKGKEALHFYDKMQS 1066
VF+ NSL+SFYAKCGSM++SLLVFN LP+KN+VSWNALICG+A +G+G EA++F++KMQ
Sbjct: 535 VFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQD 594
Query: 1065 SDLKPDSVTLLGILFACNHAGLVNEGHFYFNPARLQDPVMLKPEHYSCMVDLLSRSGRFV 886
+ L+P+SVTLLG+L ACNH+GLV++G+ YFN AR+++P +L PEH++CMVDLLSRSGRF
Sbjct: 595 TGLRPNSVTLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFK 654
Query: 885 EAEKFIEDLPFDPGVGFWKALLGGCQIHSNMELGEFAAQKILALDPEDVSSYVLLSNAHS 706
EAEKF+ +LPF PG+GFWKALLGGC+IHSNMELGE AA+KILALDPEDVSSYV+LSNAHS
Sbjct: 655 EAEKFLHELPFVPGIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHS 714
Query: 705 AAERWQNVSIVRHKMIEKGLQRVPGCSWIEMQSRIHVFVTRDEKHDQSDEIYMLLWIFLK 526
AA RWQ+VS++R +M EK ++ VPG SWIE++S++H+FVT D HDQ DEIY +L ++
Sbjct: 715 AAGRWQSVSMIRKEMREKRMKGVPGSSWIEIRSKVHIFVTGDRNHDQHDEIYQVLGFCIQ 774
Query: 525 HATDSQNL 502
H ++ +L
Sbjct: 775 HLRETYSL 782
Score = 89.0 bits (219), Expect = 3e-15
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 31/175 (17%)
Frame = -2
Query: 1425 YSQKGHNEEAVNLFIEMLREDLKPNQCTFPCAIVAAANIT*IGMGRSFHACAIKHLGRID 1246
+++ H+EEA+ F ML ++KPNQ +F I +A + + GR HACAIK +
Sbjct: 343 FARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSATALQDLNSGRQLHACAIKMGLESN 402
Query: 1245 VFVANSLISFYAKCGSM-------------------------------DDSLLVFNKLPE 1159
VFV ++++ FYAK S+ DD+L +F +PE
Sbjct: 403 VFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRXMPE 462
Query: 1158 KNVVSWNALICGFAQNGKGKEALHFYDKMQSSDLKPDSVTLLGILFACNHAGLVN 994
+NVVSWNA+I G++Q G +EA++ + M P+ T F C + + N
Sbjct: 463 RNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGXLPNERT-----FPCAISAVAN 512