BLASTX nr result

ID: Cnidium21_contig00032546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032546
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35950.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   122   4e-26
ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   121   7e-26
ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   120   2e-25
ref|XP_003569246.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-lik...   117   7e-25

>emb|CBI35950.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/70 (85%), Positives = 62/70 (88%)
 Frame = +3

Query: 87  MGKDGECCSTHLIEGDGTFNASGLENFMKEVKLSECGLSYAVVSIMGPQSSGKSTLLNHL 266
           MG   ECCST LI+GDG FN  GLENFMKEVKL+ECGLSYAVVSIMGPQSSGKSTLLNHL
Sbjct: 217 MGNADECCSTQLIDGDGMFNVHGLENFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNHL 276

Query: 267 FHTNFREMDA 296
           F TNFREMDA
Sbjct: 277 FGTNFREMDA 286


>ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Vitis
           vinifera]
          Length = 871

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/75 (77%), Positives = 63/75 (84%)
 Frame = +3

Query: 72  IELQAMGKDGECCSTHLIEGDGTFNASGLENFMKEVKLSECGLSYAVVSIMGPQSSGKST 251
           ++   +    ECCST LI+GDG FN  GLENFMKEVKL+ECGLSYAVVSIMGPQSSGKST
Sbjct: 54  VDRHTISNADECCSTQLIDGDGMFNVHGLENFMKEVKLAECGLSYAVVSIMGPQSSGKST 113

Query: 252 LLNHLFHTNFREMDA 296
           LLNHLF TNFREMDA
Sbjct: 114 LLNHLFGTNFREMDA 128


>ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/70 (82%), Positives = 61/70 (87%)
 Frame = +3

Query: 87  MGKDGECCSTHLIEGDGTFNASGLENFMKEVKLSECGLSYAVVSIMGPQSSGKSTLLNHL 266
           M     CCST LI+GDGTFN  G+ENFMKEVKL+ECGLSYAVVSIMGPQSSGKSTLLNHL
Sbjct: 1   MANSETCCSTQLIDGDGTFNVFGVENFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNHL 60

Query: 267 FHTNFREMDA 296
           F TNFREMDA
Sbjct: 61  FGTNFREMDA 70


>ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score =  120 bits (300), Expect = 2e-25
 Identities = 58/70 (82%), Positives = 62/70 (88%)
 Frame = +3

Query: 87  MGKDGECCSTHLIEGDGTFNASGLENFMKEVKLSECGLSYAVVSIMGPQSSGKSTLLNHL 266
           M     CCST LI+GDGTFN SGLE+FMKEVKL+ECGLSYAVVSIMGPQSSGKSTLLN+L
Sbjct: 1   MANSETCCSTQLIDGDGTFNVSGLESFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNNL 60

Query: 267 FHTNFREMDA 296
           F TNFREMDA
Sbjct: 61  FGTNFREMDA 70


>ref|XP_003569246.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-like [Brachypodium
           distachyon]
          Length = 806

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/64 (87%), Positives = 59/64 (92%)
 Frame = +3

Query: 105 CCSTHLIEGDGTFNASGLENFMKEVKLSECGLSYAVVSIMGPQSSGKSTLLNHLFHTNFR 284
           C ST LI+GDG FN SGLENFMKEVKL++CGLSYAVVSIMGPQSSGKSTLLNHLF TNFR
Sbjct: 5   CLSTQLIDGDGVFNVSGLENFMKEVKLADCGLSYAVVSIMGPQSSGKSTLLNHLFRTNFR 64

Query: 285 EMDA 296
           EMDA
Sbjct: 65  EMDA 68


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