BLASTX nr result

ID: Cnidium21_contig00032544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032544
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263...    84   9e-15
emb|CBI36805.3| unnamed protein product [Vitis vinifera]               84   9e-15
emb|CAN64388.1| hypothetical protein VITISV_029471 [Vitis vinifera]    84   9e-15
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...    82   6e-14
ref|XP_002328564.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
          Length = 2002

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 5/103 (4%)
 Frame = +1

Query: 19   KTPRPMHRNAAFSGSEGNELDFDSDQDIPVHPNWKSSHVANSQRRLRGRAAN----NFDS 186
            K+ RP+HR AA SG E +ELD DSD+++ V+P WKSSHVA+S++R RG        +F S
Sbjct: 1760 KSSRPIHRKAALSGIEDDELDLDSDEELSVNPKWKSSHVADSRQRGRGATGPSRGLSFGS 1819

Query: 187  DEDIGLSSGSEDE-NNHRSRNTKGNKREPNKRDFGRRASHSSE 312
            DE++GL SG++D+        +K NK    +RD  R  S + +
Sbjct: 1820 DEELGLGSGTDDDLGEDFGSQSKRNKLGSGRRDRWRGGSDTED 1862


>emb|CBI36805.3| unnamed protein product [Vitis vinifera]
          Length = 823

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 5/103 (4%)
 Frame = +1

Query: 19  KTPRPMHRNAAFSGSEGNELDFDSDQDIPVHPNWKSSHVANSQRRLRGRAAN----NFDS 186
           K+ RP+HR AA SG E +ELD DSD+++ V+P WKSSHVA+S++R RG        +F S
Sbjct: 585 KSSRPIHRKAALSGIEDDELDLDSDEELSVNPKWKSSHVADSRQRGRGATGPSRGLSFGS 644

Query: 187 DEDIGLSSGSEDE-NNHRSRNTKGNKREPNKRDFGRRASHSSE 312
           DE++GL SG++D+        +K NK    +RD  R  S + +
Sbjct: 645 DEELGLGSGTDDDLGEDFGSQSKRNKLGSGRRDRWRGGSDTED 687


>emb|CAN64388.1| hypothetical protein VITISV_029471 [Vitis vinifera]
          Length = 875

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 5/103 (4%)
 Frame = +1

Query: 19  KTPRPMHRNAAFSGSEGNELDFDSDQDIPVHPNWKSSHVANSQRRLRGRAAN----NFDS 186
           K+ RP+HR AA SG E +ELD DSD+++ V+P WKSSHVA+S++R RG        +F S
Sbjct: 633 KSSRPIHRKAALSGIEDDELDLDSDEELSVNPKWKSSHVADSRQRGRGATGPSRGLSFGS 692

Query: 187 DEDIGLSSGSEDE-NNHRSRNTKGNKREPNKRDFGRRASHSSE 312
           DE++GL SG++D+        +K NK    +RD  R  S + +
Sbjct: 693 DEELGLGSGTDDDLGEDFGSQSKRNKLGSGRRDRWRGGSDTED 735


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
            gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic
            subunit, putative [Ricinus communis]
          Length = 2066

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 44/117 (37%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
 Frame = +1

Query: 1    SFPRNAKTPRPMHRNAAFSGSEGNELDFDSDQDIPVHPNWKSSHVANSQRRLRGRAAN-- 174
            + P   K  + M + A FSGS+ +EL+ DSD+++ V+P WKSSHVA+++ + RGR+    
Sbjct: 1794 NLPSYVKPSKSMRKRATFSGSQDDELEIDSDEELSVYPKWKSSHVADARHKNRGRSPAGP 1853

Query: 175  ----NFDSDEDIGLSSGSEDENNHRSRNTKGNKREPNKRDFGRRASHSSEDFSGFES 333
                +F SDE+I L S  +++     R  KGNK+   +R + R +   +  FSG ES
Sbjct: 1854 SRRLSFGSDEEIELDSDGDEDFGSGQR--KGNKQGLGRRSYQRSSGLRNASFSGSES 1908


>ref|XP_002328564.1| predicted protein [Populus trichocarpa] gi|222838279|gb|EEE76644.1|
           predicted protein [Populus trichocarpa]
          Length = 787

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
 Frame = +1

Query: 13  NAKTPRPMHRNAAFSGSEGNELDFDSDQDIPVHPNWKSSHVANSQRRLRGRAAN------ 174
           + K  +P H   AFSGS+ +ELD DSD++  VHP WKSSHVA+ + + RG          
Sbjct: 569 SVKPSKPKHHRRAFSGSD-DELDIDSDEERSVHPKWKSSHVADIRNKNRGGVPTGPSKGL 627

Query: 175 NFDSDEDIGLSSGSEDE--NNHRSRNTKGNKREPNKRDFGRRASHSSEDFSGFES 333
           +F SDE++ L S  +D+  ++HR +  KG+ R    R+F R +      FSG ES
Sbjct: 628 SFGSDEELELDSDVDDDSGSSHRRQGRKGSGR----RNFERNSDLDDASFSGSES 678


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