BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032534
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12
ref|XP_002522334.1| pentatricopeptide repeat-containing protein,...    75   6e-12
ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi...    68   7e-10
ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containi...    63   3e-08
ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 621

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 45/95 (47%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
 Frame = +3

Query: 27  RRTTISFSSCAQTR------HLAAASSYTFDSHVKDLCDDNNYPQAIILLGENKRLPEAF 188
           RR   S S+ +Q +      H     S   D  VK LC DNN+ +AI +L E KRL EA 
Sbjct: 19  RRAICSSSTTSQPQLSKPPIHNTFFKSGAKDELVKRLCKDNNFKEAIDILCEQKRLREAI 78

Query: 189 ELLNRIDRPSPAIYSTLLELCTRQRALYLGKKVHA 293
           ++L+ +DRPS A YSTLL+LC + RAL  G KVHA
Sbjct: 79  QILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHA 113


>ref|XP_002522334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538412|gb|EEF40018.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 34/64 (53%), Positives = 48/64 (75%)
 Frame = +3

Query: 99  DSHVKDLCDDNNYPQAIILLGENKRLPEAFELLNRIDRPSPAIYSTLLELCTRQRALYLG 278
           DS +  LC++  + +AI LL E  RL EA ++LN+IDRPSP+IYS+L++ C + RAL +G
Sbjct: 40  DSFIDRLCNEGRFKEAIALLCEQNRLKEAIQVLNQIDRPSPSIYSSLIQSCLKNRALEVG 99

Query: 279 KKVH 290
           KKVH
Sbjct: 100 KKVH 103


>ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
 Frame = +3

Query: 24  LRRT-TISFSSCAQTRHLAAASSYTFDSHVKDLC-DDNNYPQAIILLGENKRLPEAFELL 197
           LRR+ + S SS + +RH    +      + KDL  +DN + +A+ +L + KR+ EA ELL
Sbjct: 19  LRRSFSFSSSSSSHSRHFQFRNDKRNHLNPKDLVSEDNKFEEAVDVLCQQKRVKEAVELL 78

Query: 198 NRID-RPSPAIYSTLLELCTRQRALYLGKKVHA 293
           +R D RPS  +YSTL+  C R RAL LG++VHA
Sbjct: 79  HRTDHRPSARVYSTLIAACVRHRALELGRRVHA 111


>ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
           gi|449484855|ref|XP_004156999.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/65 (47%), Positives = 44/65 (67%)
 Frame = +3

Query: 99  DSHVKDLCDDNNYPQAIILLGENKRLPEAFELLNRIDRPSPAIYSTLLELCTRQRALYLG 278
           D+++  LCD   + +AI +L    RL EA +LL RI++P  +IY TLL+ C +QRAL  G
Sbjct: 79  DAYINRLCDSKLFKEAIDILCGQSRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEG 138

Query: 279 KKVHA 293
           K+VHA
Sbjct: 139 KQVHA 143


>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
 Frame = +3

Query: 96  FDSHVKD------LCDDNNYPQAIILLGENKRLPEAFELLNRIDRPSPAIYSTLLELCTR 257
           F S+ KD      LC+   + +AI +L +  RL EA ++L++ID+PS ++YSTL++ C +
Sbjct: 23  FKSNTKDTTLVPHLCNHKRFDEAIHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIK 82

Query: 258 QRALYLGKKVH 290
            R L  GKKVH
Sbjct: 83  SRLLQQGKKVH 93