BLASTX nr result

ID: Cnidium21_contig00032527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032527
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_003538972.1| PREDICTED: U11/U12 small nuclear ribonucleop...    94   9e-18
ref|XP_003537786.1| PREDICTED: U11/U12 small nuclear ribonucleop...    94   9e-18
ref|XP_003537785.1| PREDICTED: U11/U12 small nuclear ribonucleop...    94   9e-18
gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]         94   1e-17

>ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|222843666|gb|EEE81213.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/67 (67%), Positives = 46/67 (68%)
 Frame = +3

Query: 3   HISWKHVWGNFCLSYHNEKLLDDNVALQDYGIRNNSQVHFILYVMXXXXXXXXXXXXXXF 182
           HISWK VW NF LSYHN+KLLDDN ALQD GIRNNSQVHF  YVM              F
Sbjct: 106 HISWKKVWANFALSYHNQKLLDDNSALQDSGIRNNSQVHFASYVMSKDSQRHSKRRKHRF 165

Query: 183 FHGLNKR 203
           FHGLNKR
Sbjct: 166 FHGLNKR 172


>ref|XP_003538972.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Glycine max]
          Length = 187

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/67 (62%), Positives = 47/67 (70%)
 Frame = +3

Query: 3   HISWKHVWGNFCLSYHNEKLLDDNVALQDYGIRNNSQVHFILYVMXXXXXXXXXXXXXXF 182
           HISWKHVW N+CLS HN KLLDDN ALQ++G+RNNSQV F+ YVM              F
Sbjct: 120 HISWKHVWANYCLSCHNNKLLDDNEALQNFGVRNNSQVQFVSYVMTKESRRHSKRRKHRF 179

Query: 183 FHGLNKR 203
           FHGLNKR
Sbjct: 180 FHGLNKR 186


>ref|XP_003537786.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like isoform 2 [Glycine max]
          Length = 190

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/67 (62%), Positives = 47/67 (70%)
 Frame = +3

Query: 3   HISWKHVWGNFCLSYHNEKLLDDNVALQDYGIRNNSQVHFILYVMXXXXXXXXXXXXXXF 182
           HISWKHVW N+CLS HN KLLDDN ALQ++G+RNNSQV F+ YVM              F
Sbjct: 123 HISWKHVWANYCLSCHNNKLLDDNEALQNFGVRNNSQVQFVSYVMTKESRRHSKRRKHRF 182

Query: 183 FHGLNKR 203
           FHGLNKR
Sbjct: 183 FHGLNKR 189


>ref|XP_003537785.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like isoform 1 [Glycine max]
          Length = 163

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/67 (62%), Positives = 47/67 (70%)
 Frame = +3

Query: 3   HISWKHVWGNFCLSYHNEKLLDDNVALQDYGIRNNSQVHFILYVMXXXXXXXXXXXXXXF 182
           HISWKHVW N+CLS HN KLLDDN ALQ++G+RNNSQV F+ YVM              F
Sbjct: 96  HISWKHVWANYCLSCHNNKLLDDNEALQNFGVRNNSQVQFVSYVMTKESRRHSKRRKHRF 155

Query: 183 FHGLNKR 203
           FHGLNKR
Sbjct: 156 FHGLNKR 162


>gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 181

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/66 (63%), Positives = 47/66 (71%)
 Frame = +3

Query: 3   HISWKHVWGNFCLSYHNEKLLDDNVALQDYGIRNNSQVHFILYVMXXXXXXXXXXXXXXF 182
           HISWKHVW NFCL++HNEK+LDD+  LQD+GIRNNSQV FI YVM              F
Sbjct: 114 HISWKHVWANFCLAHHNEKILDDSSVLQDFGIRNNSQVRFIPYVMSKNSRTHSRRRKHRF 173

Query: 183 FHGLNK 200
           FHGLNK
Sbjct: 174 FHGLNK 179


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