BLASTX nr result

ID: Cnidium21_contig00032521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032521
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   105   4e-21
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   102   4e-20
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]   100   9e-20
ref|XP_003576321.1| PREDICTED: uncharacterized protein LOC100820...    86   2e-15
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...    86   4e-15

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/107 (47%), Positives = 71/107 (66%)
 Frame = +3

Query: 156 KSAVTFSANTRDEARIEVCTELEVQQKLDPGKYLGMPMRIGANKTAVFGFLVDKIEQKLQ 335
           KSA+TFS NT D  +  +C+ L+V++  DPG YLGMP  +G NK  +F F+  K+  ++Q
Sbjct: 186 KSALTFSRNTDDVVKRGICSILQVEEXADPGIYLGMPAVVGKNKRQLFEFVRRKVWNRIQ 245

Query: 336 AWKMQNISKAGKVTLLKTAAQSIPNFWMSLLLVPVEICTTIEKKMNG 476
            W  + +S+AGK   LKT AQSIP + M LLL+P ++C  IE  MNG
Sbjct: 246 NWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPKDLCRDIESMMNG 292


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/106 (46%), Positives = 70/106 (66%)
 Frame = +3

Query: 156  KSAVTFSANTRDEARIEVCTELEVQQKLDPGKYLGMPMRIGANKTAVFGFLVDKIEQKLQ 335
            K A+TFS NT D  +  +C+ L+V+++ DPG YLGMP  +G NK  +F F+  K+  ++Q
Sbjct: 1273 KXALTFSRNTDDVVKRGICSILQVEEQADPGIYLGMPAVVGKNKRQLFEFVRRKVWNRIQ 1332

Query: 336  AWKMQNISKAGKVTLLKTAAQSIPNFWMSLLLVPVEICTTIEKKMN 473
             W  + +S+AGK   LKT AQSIP + M LLL+P ++C  IE  MN
Sbjct: 1333 NWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPKDLCRDIESMMN 1378


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/107 (45%), Positives = 71/107 (66%)
 Frame = +3

Query: 156  KSAVTFSANTRDEARIEVCTELEVQQKLDPGKYLGMPMRIGANKTAVFGFLVDKIEQKLQ 335
            KSA+TF  NT D  +  +C+ L+V+++ DPG YLGMP  +G NK  +F F+  K+  ++Q
Sbjct: 951  KSALTFIRNTDDVVKRGICSILQVKEQADPGIYLGMPAVVGKNKQQLFEFVRRKVWNRIQ 1010

Query: 336  AWKMQNISKAGKVTLLKTAAQSIPNFWMSLLLVPVEICTTIEKKMNG 476
             W  +++S+A K   LKT AQSIP + M LLL+P ++C  IE  MNG
Sbjct: 1011 NWNGRHLSRARKEICLKTVAQSIPTYVMQLLLLPKDLCRDIESMMNG 1057


>ref|XP_003576321.1| PREDICTED: uncharacterized protein LOC100820834 [Brachypodium
           distachyon]
          Length = 846

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/114 (38%), Positives = 70/114 (61%)
 Frame = +3

Query: 156 KSAVTFSANTRDEARIEVCTELEVQQKLDPGKYLGMPMRIGANKTAVFGFLVDKIEQKLQ 335
           KS++ FS NT    R +VC  L++  +    KYLG+P  +GA+++  F FLVD+++++  
Sbjct: 61  KSSIFFSPNTDVVQRQKVCETLDIMTEALSDKYLGLPPIVGADRSDCFQFLVDRVKKRTS 120

Query: 336 AWKMQNISKAGKVTLLKTAAQSIPNFWMSLLLVPVEICTTIEKKMNGVLVGWRG 497
            WK + +S  GK  LLK+ AQ+IP++ MS+  +P +IC  I   M+     WRG
Sbjct: 121 GWKEKMLSVGGKEVLLKSVAQAIPSYAMSVFNIPKQICKGITDAMSRY---WRG 171


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 36/94 (38%), Positives = 59/94 (62%)
 Frame = +3

Query: 207 VCTELEVQQKLDPGKYLGMPMRIGANKTAVFGFLVDKIEQKLQAWKMQNISKAGKVTLLK 386
           +   L V   +  GKYLG+P  +G NK A+F +L D+I +K Q+W ++++S+A K  L+K
Sbjct: 266 ITASLGVHNNIGSGKYLGLPSMVGRNKNAIFSYLKDRIWKKCQSWSVRSLSRADKEVLIK 325

Query: 387 TAAQSIPNFWMSLLLVPVEICTTIEKKMNGVLVG 488
           + AQ+IP++ M   L+P  +C  +E+ MN    G
Sbjct: 326 SVAQAIPSYCMGAFLIPASLCEELERMMNSFYWG 359


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