BLASTX nr result

ID: Cnidium21_contig00032510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032510
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526864.1| eukaryotic translation initiation factor 3f,...   261   4e-68
ref|XP_002279347.1| PREDICTED: eukaryotic translation initiation...   261   5e-68
ref|XP_002315172.1| predicted protein [Populus trichocarpa] gi|1...   256   2e-66
ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation...   255   3e-66
ref|XP_003538452.1| PREDICTED: eukaryotic translation initiation...   252   2e-65

>ref|XP_002526864.1| eukaryotic translation initiation factor 3f, eif3f, putative
           [Ricinus communis] gi|223533763|gb|EEF35495.1|
           eukaryotic translation initiation factor 3f, eif3f,
           putative [Ricinus communis]
          Length = 287

 Score =  261 bits (667), Expect = 4e-68
 Identities = 128/147 (87%), Positives = 134/147 (91%), Gaps = 2/147 (1%)
 Frame = +3

Query: 54  SSSELTVLQFT--PSPTSLSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGTVD 227
           ++SE TVLQFT  PS T LSAKVHPLVIFNICDC+VRRPDQAERVIGTLLGSVLPDGTVD
Sbjct: 2   AASEQTVLQFTSAPSSTGLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVD 61

Query: 228 IRNSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKEVIVGWFSTGFGVTGGSALIHEFY 407
           IRNSYAVPHNES DQVALDIDYHHNML SHQKVNPKEVIVGW+STG GVTGGSALIHEFY
Sbjct: 62  IRNSYAVPHNESSDQVALDIDYHHNMLLSHQKVNPKEVIVGWYSTGLGVTGGSALIHEFY 121

Query: 408 SREATNPVHLTVDTGFTNGDATIKGFV 488
           SRE  NPVHLTVDTGF NG+ TIK +V
Sbjct: 122 SREVPNPVHLTVDTGFRNGEGTIKAYV 148


>ref|XP_002279347.1| PREDICTED: eukaryotic translation initiation factor 3 subunit F
           [Vitis vinifera] gi|296086088|emb|CBI31529.3| unnamed
           protein product [Vitis vinifera]
          Length = 285

 Score =  261 bits (666), Expect = 5e-68
 Identities = 126/145 (86%), Positives = 132/145 (91%)
 Frame = +3

Query: 54  SSSELTVLQFTPSPTSLSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGTVDIR 233
           +SSE  VLQF PS TSLSAKVHPLVIFNICDC+VRRPDQAERVIGTLLGS+ PDGTVDIR
Sbjct: 2   ASSESAVLQFFPSSTSLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSISPDGTVDIR 61

Query: 234 NSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKEVIVGWFSTGFGVTGGSALIHEFYSR 413
           NSYAVPHNES DQVALDIDYHHNML SHQKVNPKEVIVGW+STG GVTGGSALIHEFYSR
Sbjct: 62  NSYAVPHNESSDQVALDIDYHHNMLLSHQKVNPKEVIVGWYSTGLGVTGGSALIHEFYSR 121

Query: 414 EATNPVHLTVDTGFTNGDATIKGFV 488
           E  NP+HLTVDT F NG+ATIK FV
Sbjct: 122 EVQNPIHLTVDTTFRNGEATIKAFV 146


>ref|XP_002315172.1| predicted protein [Populus trichocarpa] gi|118484603|gb|ABK94175.1|
           unknown [Populus trichocarpa]
           gi|222864212|gb|EEF01343.1| predicted protein [Populus
           trichocarpa]
          Length = 287

 Score =  256 bits (653), Expect = 2e-66
 Identities = 123/148 (83%), Positives = 135/148 (91%), Gaps = 1/148 (0%)
 Frame = +3

Query: 48  MASSSELTVLQFTPSPTS-LSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGTV 224
           MA+  + TVLQF PS +S LSAKVHPLVIFNICDC+VRRPDQAERVIGTLLGSVLPDGTV
Sbjct: 1   MAAIEQQTVLQFAPSSSSTLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTV 60

Query: 225 DIRNSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKEVIVGWFSTGFGVTGGSALIHEF 404
           DIRNSYAVPHNES +QVALDIDYHHN+L SHQKVNPKEVIVGW+STG GVTGGSALIH+F
Sbjct: 61  DIRNSYAVPHNESSEQVALDIDYHHNLLLSHQKVNPKEVIVGWYSTGLGVTGGSALIHDF 120

Query: 405 YSREATNPVHLTVDTGFTNGDATIKGFV 488
           YSRE  NP+HLTVDTGF+NG+ TIK +V
Sbjct: 121 YSREVPNPIHLTVDTGFSNGEGTIKAYV 148


>ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           F-like [Cucumis sativus]
           gi|449517876|ref|XP_004165970.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit F-like [Cucumis
           sativus]
          Length = 285

 Score =  255 bits (651), Expect = 3e-66
 Identities = 120/145 (82%), Positives = 133/145 (91%)
 Frame = +3

Query: 54  SSSELTVLQFTPSPTSLSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGTVDIR 233
           +++E TVLQF+ S  +LSAKVHPLVIFNICDC+VRRPDQA+RVIGTLLGSVLPDGTVDIR
Sbjct: 2   ATTETTVLQFSHSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIR 61

Query: 234 NSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKEVIVGWFSTGFGVTGGSALIHEFYSR 413
           NSYAVPHNE  DQVALDIDYHHNML+SHQKVNPKEVIVGW+STG GVTGGSALIHEFYSR
Sbjct: 62  NSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSR 121

Query: 414 EATNPVHLTVDTGFTNGDATIKGFV 488
           E  NP+HLTVDTGF NG+ TIK ++
Sbjct: 122 EVANPIHLTVDTGFKNGEGTIKAYI 146


>ref|XP_003538452.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           F-like [Glycine max]
          Length = 288

 Score =  252 bits (644), Expect = 2e-65
 Identities = 121/148 (81%), Positives = 135/148 (91%), Gaps = 3/148 (2%)
 Frame = +3

Query: 54  SSSELTVLQFTPSPTS---LSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGTV 224
           ++S+ TVLQF+ S +S   LSAKVHPLVIFNICDC+VRRPDQA+RVIGTLLGSVLPDGTV
Sbjct: 2   AASDRTVLQFSSSSSSSQSLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTV 61

Query: 225 DIRNSYAVPHNESLDQVALDIDYHHNMLASHQKVNPKEVIVGWFSTGFGVTGGSALIHEF 404
           DIRNSYAVPHNES++QVALDI+YHHNML SHQKVNPKE+IVGW+STG GVTGGSALIHEF
Sbjct: 62  DIRNSYAVPHNESIEQVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHEF 121

Query: 405 YSREATNPVHLTVDTGFTNGDATIKGFV 488
           YSRE  NP+HLTVDTGFTNG  TIK +V
Sbjct: 122 YSREVPNPIHLTVDTGFTNGAGTIKAYV 149


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