BLASTX nr result

ID: Cnidium21_contig00032508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032508
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525885.1| PREDICTED: uncharacterized protein LOC100798...   125   2e-26
ref|XP_003549919.1| PREDICTED: uncharacterized protein LOC100808...   121   2e-25
ref|XP_003618031.1| Retinoblastoma-binding protein [Medicago tru...   120   4e-25
ref|XP_003608693.1| Retinoblastoma-binding protein [Medicago tru...   120   5e-25
ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854...   116   7e-24

>ref|XP_003525885.1| PREDICTED: uncharacterized protein LOC100798536 [Glycine max]
          Length = 845

 Score =  125 bits (313), Expect = 2e-26
 Identities = 72/130 (55%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
 Frame = -1

Query: 835 CPLCRAVMKDAVLAXXXXXXXXXXXCIRDYIISKSLCFCGATNVLADDLLPNKTLRGTIV 656
           CPLC  VMKDAVL            CIRDYIISKS+C CGATN+LADDLLPNKTLR TI 
Sbjct: 293 CPLCNDVMKDAVLTSKCCFKSFCDRCIRDYIISKSICVCGATNILADDLLPNKTLRDTIN 352

Query: 655 RILDXXXXXXXXXXSTYQPQDMESARCSQPKIPCSNVPSRTLSATSKEDV-LAPKNKGNT 479
           RIL+          ST+Q QDMESARC QPKI     PS T SA SK ++ ++P N+  T
Sbjct: 353 RILESGNSSAENAGSTFQAQDMESARCPQPKI-----PSPTSSAASKGELKVSPVNEKTT 407

Query: 478 KVEEMTEPVK 449
            ++E T+  K
Sbjct: 408 NIQETTDDRK 417


>ref|XP_003549919.1| PREDICTED: uncharacterized protein LOC100808703 [Glycine max]
          Length = 849

 Score =  121 bits (304), Expect = 2e-25
 Identities = 71/130 (54%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
 Frame = -1

Query: 835 CPLCRAVMKDAVLAXXXXXXXXXXXCIRDYIISKSLCFCGATNVLADDLLPNKTLRGTIV 656
           CPLC  VMKDAVL            CIRDYIISKS+C CGATN+LADDLLPNKTLR TI 
Sbjct: 293 CPLCNDVMKDAVLTSKCCFKSFCDRCIRDYIISKSICVCGATNILADDLLPNKTLRDTIN 352

Query: 655 RILDXXXXXXXXXXSTYQPQDMESARCSQPKIPCSNVPSRTLSATSKEDV-LAPKNKGNT 479
           RIL+          ST+Q QDMESARC QPKI     PS T SA SK D+ ++  N+  T
Sbjct: 353 RILESGNSSAENAGSTFQAQDMESARCPQPKI-----PSPTSSAASKGDLKVSSVNEKTT 407

Query: 478 KVEEMTEPVK 449
            ++E  +  K
Sbjct: 408 NIQETADDRK 417


>ref|XP_003618031.1| Retinoblastoma-binding protein [Medicago truncatula]
           gi|355519366|gb|AET00990.1| Retinoblastoma-binding
           protein [Medicago truncatula]
          Length = 672

 Score =  120 bits (301), Expect = 4e-25
 Identities = 73/148 (49%), Positives = 90/148 (60%), Gaps = 1/148 (0%)
 Frame = -1

Query: 835 CPLCRAVMKDAVLAXXXXXXXXXXXCIRDYIISKSLCFCGATNVLADDLLPNKTLRGTIV 656
           CPLC  VMKDAVL+           CIRDYI+SKS C C ATN+LADDLLPNKTLR  I 
Sbjct: 293 CPLCNNVMKDAVLSSKCCFKSFCDKCIRDYIMSKSACVCLATNILADDLLPNKTLRDAIN 352

Query: 655 RILDXXXXXXXXXXSTYQPQDMESARCSQPKIPCSNVPSRTLSATSK-EDVLAPKNKGNT 479
           RIL+          STYQ QDMES+RC QPKI     PS T SATSK E  ++  N+G T
Sbjct: 353 RILESGNSSTENARSTYQVQDMESSRCPQPKI-----PSSTSSATSKGEPKVSQVNEGMT 407

Query: 478 KVEEMTEPVKIDNNMQKILGIVTIEKGA 395
            ++E+   +K  +  Q++   V + + A
Sbjct: 408 NIQEIAAEIKDVSATQQVSEQVKMPRAA 435


>ref|XP_003608693.1| Retinoblastoma-binding protein [Medicago truncatula]
           gi|355509748|gb|AES90890.1| Retinoblastoma-binding
           protein [Medicago truncatula]
          Length = 908

 Score =  120 bits (300), Expect = 5e-25
 Identities = 71/131 (54%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
 Frame = -1

Query: 835 CPLCRAVMKDAVLAXXXXXXXXXXXCIRDYIISKSLCFCGATNVLADDLLPNKTLRGTIV 656
           CPLC  VMKDAVL            CIRDYIISKS+C CGA NVLADDLLPNKTLR TI 
Sbjct: 302 CPLCSNVMKDAVLTSKCCFKSFCDKCIRDYIISKSMCVCGAMNVLADDLLPNKTLRDTIN 361

Query: 655 RILDXXXXXXXXXXSTYQPQDMESARCSQPKIPCSNVPSRTLSATSKEDV-LAPKNKGNT 479
           RIL+          STYQ QDMESARC QPKI     PS T SA SK  + ++P   G T
Sbjct: 362 RILESGNSSTENAGSTYQVQDMESARCPQPKI-----PSPTSSAASKGGLKISPVYDGTT 416

Query: 478 KVEEMTEPVKI 446
            +++     K+
Sbjct: 417 NIQDTAVETKV 427


>ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854867 [Vitis vinifera]
          Length = 823

 Score =  116 bits (290), Expect = 7e-24
 Identities = 66/113 (58%), Positives = 73/113 (64%)
 Frame = -1

Query: 835 CPLCRAVMKDAVLAXXXXXXXXXXXCIRDYIISKSLCFCGATNVLADDLLPNKTLRGTIV 656
           CPLC+ VMKDAVL            CIRD+IISKS+C CGATN+LADDLLPNKTLR TI 
Sbjct: 293 CPLCKEVMKDAVLTSKCCFKSFCYKCIRDHIISKSMCVCGATNILADDLLPNKTLRDTIN 352

Query: 655 RILDXXXXXXXXXXSTYQPQDMESARCSQPKIPCSNVPSRTLSATSKEDVLAP 497
           RIL+          S  Q QDMESARC QPKI     PS TLSA SK + + P
Sbjct: 353 RILESNNSSAENAGSALQVQDMESARCPQPKI-----PSPTLSAASKGEQMPP 400


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