BLASTX nr result

ID: Cnidium21_contig00032488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032488
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280929.2| PREDICTED: uncharacterized protein LOC100265...   313   4e-83
emb|CAN69885.1| hypothetical protein VITISV_005071 [Vitis vinifera]   302   7e-80
ref|XP_002519545.1| protein binding protein, putative [Ricinus c...   273   3e-71
ref|XP_002326349.1| predicted protein [Populus trichocarpa] gi|2...   252   8e-65
ref|XP_002884753.1| zinc finger family protein [Arabidopsis lyra...   230   3e-58

>ref|XP_002280929.2| PREDICTED: uncharacterized protein LOC100265508 [Vitis vinifera]
           gi|297741592|emb|CBI32724.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  313 bits (801), Expect = 4e-83
 Identities = 167/280 (59%), Positives = 194/280 (69%), Gaps = 1/280 (0%)
 Frame = +2

Query: 2   FSPLPSPSYAKFNXXXXXXXXXXXXXXXXXXXXXXXXMKNTNSDIEKAAILALVGSSS-Q 178
           FSP+PSPSY K N                         +++ S+IEKAAILAL  SS+  
Sbjct: 84  FSPMPSPSYTKINVSPGPSPSKGRSSIKSLLPKLSFKYRSSTSEIEKAAILALGASSTGT 143

Query: 179 RHKSFFPSTGSLTRLFTPRMKNTSSLPVTPIVHSNPESTHGGNTSDLQNADKGGNQYFIH 358
           R K   P T SLT+LFTP+MK TSSLPV+PI HSNPES HGGNT DL ++ KGG+   IH
Sbjct: 144 REKPLTPRTSSLTKLFTPKMKRTSSLPVSPIAHSNPESMHGGNTIDLLDSAKGGSLLPIH 203

Query: 359 RSHSVPDLNKDGSLRQLESLGGVFRVVSIAPRVTEGTSAPSNATPPLXXXXXXXXXXXXX 538
           RSHSVP +NKD S+RQ++SLGGVFRVV   PRV E T A + A+P +             
Sbjct: 204 RSHSVPVINKDESIRQMDSLGGVFRVVPTTPRVAEVTVATAIASPTVDAGGNDDDGED-- 261

Query: 539 XXHILEEEAVCRICLIELREDANTLKMECSCKGELALAHQECAIKWFSIKGNKTCEVCKQ 718
              I EEEAVCRIC+IEL E A+TLKMECSCKGELALAHQECA+KWFSIKGNKTC+VCKQ
Sbjct: 262 ---IPEEEAVCRICMIELGEGADTLKMECSCKGELALAHQECAVKWFSIKGNKTCDVCKQ 318

Query: 719 DVQNLPVALLRIQHTRSNILLGNGARNAEAAGYRVWQDVP 838
           +VQNLPV LLRIQ+ ++  L GN  R AEA GYRVWQDVP
Sbjct: 319 EVQNLPVTLLRIQNAQALNLQGNRGRQAEATGYRVWQDVP 358


>emb|CAN69885.1| hypothetical protein VITISV_005071 [Vitis vinifera]
          Length = 457

 Score =  302 bits (773), Expect = 7e-80
 Identities = 165/280 (58%), Positives = 192/280 (68%), Gaps = 1/280 (0%)
 Frame = +2

Query: 2   FSPLPSPSYAKFNXXXXXXXXXXXXXXXXXXXXXXXXMKNTNSDIEKAAILALVGSSS-Q 178
           FSP+PSPSY K N                         +++ S+IEKAAILAL  SS+  
Sbjct: 84  FSPMPSPSYTKINVSPGPSPSKGRSSIKSLLPKLSFKYRSSTSEIEKAAILALGASSTGT 143

Query: 179 RHKSFFPSTGSLTRLFTPRMKNTSSLPVTPIVHSNPESTHGGNTSDLQNADKGGNQYFIH 358
           R K   P T SLT+LFTP+MK TSSLPV+PI HSNPES HGGNT DL ++ KGG+   IH
Sbjct: 144 REKPLTPRTSSLTKLFTPKMKRTSSLPVSPIAHSNPESMHGGNTIDLLDSAKGGSLLPIH 203

Query: 359 RSHSVPDLNKDGSLRQLESLGGVFRVVSIAPRVTEGTSAPSNATPPLXXXXXXXXXXXXX 538
           RSHSVP +NKD S+RQ++SLGGVFRVV   PRV E T A + A+P +             
Sbjct: 204 RSHSVPVINKDESIRQMDSLGGVFRVVPTTPRVAEVTVATAIASPTVDAGGNDDDGED-- 261

Query: 539 XXHILEEEAVCRICLIELREDANTLKMECSCKGELALAHQECAIKWFSIKGNKTCEVCKQ 718
              I EEEAVCRIC+IEL E A+TLKMECSCKGELALAHQECA+KWFSIKGNKTC+VCKQ
Sbjct: 262 ---IPEEEAVCRICMIELGEGADTLKMECSCKGELALAHQECAVKWFSIKGNKTCDVCKQ 318

Query: 719 DVQNLPVALLRIQHTRSNILLGNGARNAEAAGYRVWQDVP 838
           +VQNLPV LLRIQ+ ++  L GN  R AEA GYR  QDVP
Sbjct: 319 EVQNLPVTLLRIQNAQALNLQGNRGRQAEATGYR--QDVP 356


>ref|XP_002519545.1| protein binding protein, putative [Ricinus communis]
           gi|223541408|gb|EEF42959.1| protein binding protein,
           putative [Ricinus communis]
          Length = 512

 Score =  273 bits (699), Expect = 3e-71
 Identities = 153/281 (54%), Positives = 179/281 (63%), Gaps = 2/281 (0%)
 Frame = +2

Query: 2   FSPLPSPSYAKFNXXXXXXXXXXXXXXXXXXXXXXXXMKNTNSDIEKAAILALVGSSSQ- 178
           FSP PSPS  K N                         +NT SDIEKAAILAL GSS + 
Sbjct: 84  FSPFPSPSLFKINDSPDPSPSKNKSTIRSLLPKLSFKYRNTTSDIEKAAILALGGSSVEI 143

Query: 179 RHKSFFPSTGSLTRLFTPRMKNTSSLPVTPIVHSNPESTHGGNTSDLQNADKGGNQYFIH 358
             K F   T S T+LFTPR K TSSLPVTPI HSNPES HGG  ++  ++ KG  Q  IH
Sbjct: 144 EKKPFLSRTMSFTKLFTPRTKRTSSLPVTPIAHSNPESMHGGYATNPSSSAKGDAQKPIH 203

Query: 359 RSHSVPDLNKDGSLRQLESLGGVFRVVSIAPRVTE-GTSAPSNATPPLXXXXXXXXXXXX 535
           RS SVP ++K+GS+RQ++  GG+FRVV   PR  E   +  S+A+P              
Sbjct: 204 RSRSVPMMDKEGSVRQIDPSGGIFRVVPTTPRPAEVAVTTTSSASP-----RNDIDGNED 258

Query: 536 XXXHILEEEAVCRICLIELREDANTLKMECSCKGELALAHQECAIKWFSIKGNKTCEVCK 715
               I EEEAVCRICL+EL E  +TLKMECSCKGELALAHQECA+KWFSIKGNKTC+VCK
Sbjct: 259 SGEDIPEEEAVCRICLVELGEGGDTLKMECSCKGELALAHQECAVKWFSIKGNKTCDVCK 318

Query: 716 QDVQNLPVALLRIQHTRSNILLGNGARNAEAAGYRVWQDVP 838
           Q+V+NL V LLR+Q+ R     GN +R AE A YRVWQDVP
Sbjct: 319 QEVKNLAVTLLRLQNAR-----GNRSRPAEVAQYRVWQDVP 354


>ref|XP_002326349.1| predicted protein [Populus trichocarpa] gi|222833542|gb|EEE72019.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  252 bits (643), Expect = 8e-65
 Identities = 146/286 (51%), Positives = 176/286 (61%), Gaps = 7/286 (2%)
 Frame = +2

Query: 2   FSPLPSPSYAKFNXXXXXXXXXXXXXXXXXXXXXXXXMKNTNSDIEKAAILALVGSSSQ- 178
           FSP+PSPS+A+ N                         +N+  DIEKAA +   G SS+ 
Sbjct: 37  FSPMPSPSFAQMNEPPDPLSSKIKSNIRSLLPKLSFKYRNSTLDIEKAAAMLAQGGSSET 96

Query: 179 -RHKSFFPSTGSLTRLFTPRMKNTSSLPVTPIVHSNPESTHGGNTSDLQNADKGGNQYFI 355
            + K F   T SLT+LFT R   TSSLPVTPI HSNPES HGG+  +  ++ K      I
Sbjct: 97  TKQKPFISRTLSLTKLFTLRTTRTSSLPVTPIAHSNPESMHGGSMINPPSSVKRP----I 152

Query: 356 HRSHSVPDLNKDGSLRQLESLGGVFRVVSIAPRVTE---GTSAPSNATPPLXXXXXXXXX 526
           HRSHSVPD  KDGS+R+L+SLGG+FRVV   PRV E        SNA+P           
Sbjct: 153 HRSHSVPDFRKDGSIRKLDSLGGLFRVVPSTPRVAEEAVSIMTTSNASP-----RNDTDG 207

Query: 527 XXXXXXHILEEEAVCRICLIELREDANTLKMECSCKGELALAHQECAIKWFSIKGNKTCE 706
                  I EEEAVCRICLI L E ++TLKMECSCKGELALAHQECA+KWFS+KGN+TCE
Sbjct: 208 NDDGGEDIPEEEAVCRICLIVLGEGSDTLKMECSCKGELALAHQECAVKWFSVKGNRTCE 267

Query: 707 VCKQDVQNLPVALLRIQHTRSNILLGNGARNAE--AAGYRVWQDVP 838
           VCKQDV NLPV LLR+Q++++    G    + +  A   RVWQDVP
Sbjct: 268 VCKQDVLNLPVTLLRVQNSQAVGSQGQTQHSEKMVANFLRVWQDVP 313


>ref|XP_002884753.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330593|gb|EFH61012.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 488

 Score =  230 bits (587), Expect = 3e-58
 Identities = 132/244 (54%), Positives = 155/244 (63%), Gaps = 3/244 (1%)
 Frame = +2

Query: 116 KNTNS---DIEKAAILALVGSSSQRHKSFFPSTGSLTRLFTPRMKNTSSLPVTPIVHSNP 286
           KN NS   DIEKAA L  V S S  + S   ST +LT + TPR+K T SLPVTPI HSNP
Sbjct: 126 KNRNSNNVDIEKAADLGFVSSPSSGN-SRDRSTWTLTNILTPRLKKTESLPVTPIAHSNP 184

Query: 287 ESTHGGNTSDLQNADKGGNQYFIHRSHSVPDLNKDGSLRQLESLGGVFRVVSIAPRVTEG 466
           ESTHG    D+  + K G    IHRS SVP LNKDGSLRQL    GVFRV+         
Sbjct: 185 ESTHGRFAVDIVTSTKKGPPLPIHRSRSVPALNKDGSLRQL----GVFRVI--------- 231

Query: 467 TSAPSNATPPLXXXXXXXXXXXXXXXHILEEEAVCRICLIELREDANTLKMECSCKGELA 646
              P+    P                 + EEEAVCRICL+EL ED+   KMEC C+GELA
Sbjct: 232 ---PTPNMTPTRNTIKLNDANVDGAEDVPEEEAVCRICLVELGEDSEAFKMECMCRGELA 288

Query: 647 LAHQECAIKWFSIKGNKTCEVCKQDVQNLPVALLRIQHTRSNILLGNGARNAEAAGYRVW 826
           LAH+EC IKWF+IKGN+TC+VCKQ+VQNLPV LLR+Q++R +I    GA + EAA Y +W
Sbjct: 289 LAHKECTIKWFTIKGNRTCDVCKQEVQNLPVTLLRMQNSRGSI----GAPDTEAAHYSLW 344

Query: 827 QDVP 838
           QDVP
Sbjct: 345 QDVP 348


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