BLASTX nr result

ID: Cnidium21_contig00032487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032487
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522371.1| mRNA, complete cds, clone: rafl24-09-C04, pu...   137   1e-30
emb|CBI34939.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002278851.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   126   2e-27
ref|XP_004148047.1| PREDICTED: UPF0420 protein C16orf58-like [Cu...   121   8e-26
ref|XP_004163622.1| PREDICTED: LOW QUALITY PROTEIN: UPF0420 prot...   120   1e-25

>ref|XP_002522371.1| mRNA, complete cds, clone: rafl24-09-C04, putative [Ricinus
           communis] gi|223538449|gb|EEF40055.1| mRNA, complete
           cds, clone: rafl24-09-C04, putative [Ricinus communis]
          Length = 523

 Score =  137 bits (344), Expect = 1e-30
 Identities = 80/173 (46%), Positives = 108/173 (62%), Gaps = 18/173 (10%)
 Frame = +1

Query: 76  TSSPVSNSHLQWTSSKTH---HFFSSYKQLK-------PLCFSLKAS-SFEFQD------ 204
           +SS  +  H QW    +H   H     KQL+        L  SL+ S ++E ++      
Sbjct: 7   SSSSYTQFHYQWKVQNSHFPSHRKPVSKQLRFSIPKALTLTNSLRTSINYEPEEGLDNGP 66

Query: 205 -PKLTIPARLPVTIRRSGSVFQYSWDGNELKLISLDKRSSLSTSFDDFEYGYKRLFEFFS 381
            P    P RLPV +R SG V +Y WDG+ +KL+S+D  ++   S  DFE GY++LF   S
Sbjct: 67  GPGPMFPVRLPVVVRNSGRVSRYMWDGSSVKLVSVDGGAA---SCVDFEDGYRKLFRALS 123

Query: 382 LPVRNFFLPGEINGNYVEYVKWKFLHRLFSSALQVLATQAMFRAIGIGYAHSL 540
           L VR+FF+P ++  NY++YVKWK LHR+FSSALQVLATQAMFRA+GIGY+ SL
Sbjct: 124 LGVRDFFIPKQVTENYMDYVKWKLLHRVFSSALQVLATQAMFRAVGIGYSRSL 176


>emb|CBI34939.3| unnamed protein product [Vitis vinifera]
          Length = 559

 Score =  126 bits (317), Expect = 2e-27
 Identities = 75/129 (58%), Positives = 92/129 (71%), Gaps = 6/129 (4%)
 Frame = +1

Query: 172 SLKAS---SFEFQDPKLTIPARLPVTIRRSGSVFQYSWDGNE--LKLISLDK-RSSLSTS 333
           SLK S    FE  D  ++  ARLPV IRR G V QY W+G+E  L+L+ +D   SSL  +
Sbjct: 84  SLKTSCEHEFEGVDGPIST-ARLPVVIRRWGRVSQYLWNGSESRLQLVRVDGGASSLCLN 142

Query: 334 FDDFEYGYKRLFEFFSLPVRNFFLPGEINGNYVEYVKWKFLHRLFSSALQVLATQAMFRA 513
           FDD   G   LF   S  VR+FF+P +++GNY++YVKWKFLHR+FSSALQVLATQAMFRA
Sbjct: 143 FDD---GLNNLFALCSSAVRDFFIPQKVSGNYMDYVKWKFLHRVFSSALQVLATQAMFRA 199

Query: 514 IGIGYAHSL 540
           IGIGY+ SL
Sbjct: 200 IGIGYSRSL 208


>ref|XP_002278851.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera]
          Length = 514

 Score =  126 bits (317), Expect = 2e-27
 Identities = 75/129 (58%), Positives = 92/129 (71%), Gaps = 6/129 (4%)
 Frame = +1

Query: 172 SLKAS---SFEFQDPKLTIPARLPVTIRRSGSVFQYSWDGNE--LKLISLDK-RSSLSTS 333
           SLK S    FE  D  ++  ARLPV IRR G V QY W+G+E  L+L+ +D   SSL  +
Sbjct: 39  SLKTSCEHEFEGVDGPIST-ARLPVVIRRWGRVSQYLWNGSESRLQLVRVDGGASSLCLN 97

Query: 334 FDDFEYGYKRLFEFFSLPVRNFFLPGEINGNYVEYVKWKFLHRLFSSALQVLATQAMFRA 513
           FDD   G   LF   S  VR+FF+P +++GNY++YVKWKFLHR+FSSALQVLATQAMFRA
Sbjct: 98  FDD---GLNNLFALCSSAVRDFFIPQKVSGNYMDYVKWKFLHRVFSSALQVLATQAMFRA 154

Query: 514 IGIGYAHSL 540
           IGIGY+ SL
Sbjct: 155 IGIGYSRSL 163


>ref|XP_004148047.1| PREDICTED: UPF0420 protein C16orf58-like [Cucumis sativus]
          Length = 523

 Score =  121 bits (303), Expect = 8e-26
 Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 16/174 (9%)
 Frame = +1

Query: 67  MQITS-SPVSNSHLQ----WTSSKTHHFFSSYKQLKPLCFSLKASSFEFQD--------- 204
           MQ TS +P+SNS LQ    WT  +TH   ++      LCF  +  +   +          
Sbjct: 1   MQTTSFNPLSNS-LQLSPPWTLPETHLPIANGVP-NTLCFRPRTVTRSLRTCYRADDGID 58

Query: 205 --PKLTIPARLPVTIRRSGSVFQYSWDGNELKLISLDKRSSLSTSFDDFEYGYKRLFEFF 378
             P  + P RLP+ +RRSG V QY WDG  L+LI  D  +S S SFD F  G++ L+   
Sbjct: 59  DGPGPSSPVRLPLVLRRSGRVSQYVWDGFSLQLIGFDGGAS-SVSFD-FGDGFRTLYRVS 116

Query: 379 SLPVRNFFLPGEINGNYVEYVKWKFLHRLFSSALQVLATQAMFRAIGIGYAHSL 540
            L V++FF+P  ++ +YV YVKWK LHR+FSSALQV+ATQAMFRAIG+G++ SL
Sbjct: 117 VLAVKDFFIPKNVSEHYVIYVKWKLLHRVFSSALQVIATQAMFRAIGVGHSRSL 170


>ref|XP_004163622.1| PREDICTED: LOW QUALITY PROTEIN: UPF0420 protein C16orf58-like
           [Cucumis sativus]
          Length = 523

 Score =  120 bits (301), Expect = 1e-25
 Identities = 79/174 (45%), Positives = 105/174 (60%), Gaps = 16/174 (9%)
 Frame = +1

Query: 67  MQITS-SPVSNSHLQ----WTSSKTHHFFSSYKQLKPLCFSLKASSFEFQD--------- 204
           MQ TS +P+SNS LQ    WT  +TH   ++      LCF  +  +   +          
Sbjct: 1   MQTTSFNPLSNS-LQLSPPWTLPETHLPIANGVP-NTLCFRPRTVTRSLRTCYRADDGID 58

Query: 205 --PKLTIPARLPVTIRRSGSVFQYSWDGNELKLISLDKRSSLSTSFDDFEYGYKRLFEFF 378
             P  + P RLP+ +RRSG V QY WDG  L+LI  D  +S S SFD F  G++ L+   
Sbjct: 59  DGPGPSSPVRLPLVLRRSGRVSQYVWDGFSLQLIGFDGGAS-SVSFD-FGDGFRTLYRVS 116

Query: 379 SLPVRNFFLPGEINGNYVEYVKWKFLHRLFSSALQVLATQAMFRAIGIGYAHSL 540
            L V+ FF+P  ++ +YV YVKWK LHR+FSSALQV+ATQAMFRAIG+G++ SL
Sbjct: 117 VLAVKXFFIPKNVSEHYVIYVKWKLLHRVFSSALQVIATQAMFRAIGVGHSRSL 170


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