BLASTX nr result

ID: Cnidium21_contig00032470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032470
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis ...    92   6e-17
emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]    92   6e-17
ref|XP_002517803.1| conserved hypothetical protein [Ricinus comm...    88   7e-16
ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [C...    85   7e-15
ref|XP_002333390.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14

>ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis vinifera]
           gi|296081827|emb|CBI20832.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 4/102 (3%)
 Frame = +1

Query: 1   AQADKDTLADAVSILGEYLKDEPWXXXXXXXXXIDLQEA--KAPDSEILPSSTESSLPSF 174
           A+  KDTL DA+SILGEYL+DEPW         ++L +A  KA   E  P++ ++SL S 
Sbjct: 176 ARDKKDTLTDAISILGEYLEDEPWLKLLCDHLKLNLLDATMKASVIEFHPTAPDNSLGSS 235

Query: 175 DDVQKKNGIEKRTTR--QQSKKAKVETGSLNIKDMFSKASRK 294
           + +Q K+G E++TTR  +Q KKAKVE  S NIKDMFS+ASRK
Sbjct: 236 NQLQGKSGNERKTTRPGKQPKKAKVEKDSRNIKDMFSRASRK 277


>emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]
          Length = 277

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 4/102 (3%)
 Frame = +1

Query: 1   AQADKDTLADAVSILGEYLKDEPWXXXXXXXXXIDLQEA--KAPDSEILPSSTESSLPSF 174
           A+  KDTL DA+SILGEYL+DEPW         ++L +A  KA   E  P++ ++SL S 
Sbjct: 176 ARDKKDTLTDAISILGEYLEDEPWLKLLCDHLKLNLLDATMKAXVIEFHPTAPDNSLGSS 235

Query: 175 DDVQKKNGIEKRTTR--QQSKKAKVETGSLNIKDMFSKASRK 294
           + +Q K+G E++TTR  +Q KKAKVE  S NIKDMFS+ASRK
Sbjct: 236 NQLQGKSGNERKTTRPGKQPKKAKVEKDSRNIKDMFSRASRK 277


>ref|XP_002517803.1| conserved hypothetical protein [Ricinus communis]
           gi|223543075|gb|EEF44610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 299

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 53/103 (51%), Positives = 72/103 (69%), Gaps = 4/103 (3%)
 Frame = +1

Query: 1   AQADKDTLADAVSILGEYLKDEPWXXXXXXXXXIDLQEA--KAPDSEILPSSTESSLPSF 174
           AQ +K+TLADA+ ILGEYLKDEPW         ++L EA  K PD+E   S TE++  S 
Sbjct: 199 AQDEKNTLADAIMILGEYLKDEPWLKLLCNHLKLNLLEATRKVPDAE--TSLTENNPASS 256

Query: 175 DDVQKKNGIEKRTTR--QQSKKAKVETGSLNIKDMFSKASRKR 297
           + +Q+K   + +T R  +Q+KKAKVET SLNI++MFS+ASR+R
Sbjct: 257 NLMQEKGKNDGKTKRTGKQAKKAKVETESLNIREMFSRASRRR 299


>ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [Cucumis sativus]
           gi|449499524|ref|XP_004160839.1| PREDICTED: ribonuclease
           H2 subunit B-like [Cucumis sativus]
          Length = 281

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 50/105 (47%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
 Frame = +1

Query: 1   AQADKDTLADAVSILGEYLKDEPWXXXXXXXXXIDLQEA--KAPDSEILPSSTESSLPSF 174
           A+ +K+TL DAVSILGEYLKD+PW         ++  EA  KA DSE  P+S E++  S 
Sbjct: 176 AREEKETLCDAVSILGEYLKDQPWLKLLCDHLKLNFAEATRKASDSERAPTSIENNFDSI 235

Query: 175 --DDVQKKNGIEKRTTR--QQSKKAKVETGSLNIKDMFSKASRKR 297
             D    ++G   + TR  +Q+KK KVET S NIKDMFSKA++++
Sbjct: 236 SQDKSGSRSGSGAKNTRNGKQAKKPKVETESRNIKDMFSKAAKRK 280


>ref|XP_002333390.1| predicted protein [Populus trichocarpa] gi|222836425|gb|EEE74832.1|
           predicted protein [Populus trichocarpa]
          Length = 551

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/102 (47%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
 Frame = +1

Query: 1   AQADKDTLADAVSILGEYLKDEPWXXXXXXXXXIDLQE--AKAPDSEILPSSTESSLPSF 174
           AQ +K TLA AVSILGEY+KDEPW         ++L E  +K P++E  P++ E +  S 
Sbjct: 449 AQDEKYTLAGAVSILGEYVKDEPWLMLLLDHLKLNLLEVTSKVPEAENFPTNAEHNPVSS 508

Query: 175 DDVQKKNGIEKRTTR--QQSKKAKVETGSLNIKDMFSKASRK 294
             +Q+K+  E +T R  +Q+KKAKVET S NI++MF +A RK
Sbjct: 509 SLLQEKDRSEDKTKRSGKQAKKAKVETESRNIREMFRRACRK 550


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