BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032460
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16383.3| unnamed protein product [Vitis vinifera]              223   2e-56
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   223   2e-56
ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m...   218   4e-55
ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   212   3e-53
ref|XP_002894309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m...   209   3e-52

>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  223 bits (568), Expect = 2e-56
 Identities = 102/115 (88%), Positives = 108/115 (93%)
 Frame = -2

Query: 347 NVEIDPHYLSCCMPNKRLSVAVLISGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENF 168
           N ++ P YLSC +PN RL +AVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENF
Sbjct: 72  NADLQP-YLSCSLPNNRLKIAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENF 130

Query: 167 WSECPWEDDLKYAKAVCNQVDVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDV 3
           WSECPWEDDLKYAKAVC+QVDVPLEVVHLTDEYW NVVSYIIEEYRCGRTPNPDV
Sbjct: 131 WSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDV 185


>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
          Length = 540

 Score =  223 bits (568), Expect = 2e-56
 Identities = 102/115 (88%), Positives = 108/115 (93%)
 Frame = -2

Query: 347 NVEIDPHYLSCCMPNKRLSVAVLISGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENF 168
           N ++ P YLSC +PN RL +AVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENF
Sbjct: 68  NADLQP-YLSCSLPNNRLKIAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENF 126

Query: 167 WSECPWEDDLKYAKAVCNQVDVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDV 3
           WSECPWEDDLKYAKAVC+QVDVPLEVVHLTDEYW NVVSYIIEEYRCGRTPNPDV
Sbjct: 127 WSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDV 181


>ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ricinus communis] gi|223547418|gb|EEF48913.1|
           tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ricinus communis]
          Length = 497

 Score =  218 bits (556), Expect = 4e-55
 Identities = 98/113 (86%), Positives = 108/113 (95%), Gaps = 1/113 (0%)
 Frame = -2

Query: 338 IDPHYLSCCMPNKR-LSVAVLISGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWS 162
           I+P+YLSCC+P+K  L +A+L+SGGVDSSVALRLLHAAGH CTAFYLKIWFQEDFENFWS
Sbjct: 56  IEPNYLSCCLPDKNNLRIALLLSGGVDSSVALRLLHAAGHHCTAFYLKIWFQEDFENFWS 115

Query: 161 ECPWEDDLKYAKAVCNQVDVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDV 3
           ECPWE+DLKYAKAVC+QVD+PLEVVHLTDEYW NVVSYIIEEYRCGRTPNPDV
Sbjct: 116 ECPWEEDLKYAKAVCDQVDIPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDV 168


>ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus] gi|449524848|ref|XP_004169433.1| PREDICTED:
           tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus]
          Length = 538

 Score =  212 bits (540), Expect = 3e-53
 Identities = 97/108 (89%), Positives = 102/108 (94%)
 Frame = -2

Query: 326 YLSCCMPNKRLSVAVLISGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWE 147
           +LSC MP   L VAVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW+
Sbjct: 72  FLSCSMPTYPLKVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWD 131

Query: 146 DDLKYAKAVCNQVDVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDV 3
           DDLKYAKAVC+QVDVPLEVVHLT+EYW NVVSYIIEEYRCGRTPNPDV
Sbjct: 132 DDLKYAKAVCDQVDVPLEVVHLTEEYWRNVVSYIIEEYRCGRTPNPDV 179


>ref|XP_002894309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arabidopsis lyrata subsp. lyrata]
           gi|297340151|gb|EFH70568.1| tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 500

 Score =  209 bits (532), Expect = 3e-52
 Identities = 96/108 (88%), Positives = 99/108 (91%)
 Frame = -2

Query: 326 YLSCCMPNKRLSVAVLISGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWE 147
           YLSC MP K L VAVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQE FENFW++CPWE
Sbjct: 75  YLSCSMPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWE 134

Query: 146 DDLKYAKAVCNQVDVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDV 3
           DDLKYAK VC QVDVPLEVVHLTDEYW  VVSYIIEEYRCGRTPNPDV
Sbjct: 135 DDLKYAKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDV 182