BLASTX nr result

ID: Cnidium21_contig00032457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032457
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278564.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   265   2e-69
ref|XP_002513536.1| ubiquitin-conjugating enzyme E2 C, putative ...   260   9e-68
ref|XP_004140207.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   252   2e-65
ref|XP_002314089.1| predicted protein [Populus trichocarpa] gi|1...   252   2e-65
ref|NP_564572.1| ubiquitin-conjugating enzyme E2 20 [Arabidopsis...   249   1e-64

>ref|XP_002278564.1| PREDICTED: ubiquitin-conjugating enzyme E2 19 [Vitis vinifera]
           gi|147820972|emb|CAN74597.1| hypothetical protein
           VITISV_003479 [Vitis vinifera]
           gi|297734957|emb|CBI17191.3| unnamed protein product
           [Vitis vinifera]
          Length = 177

 Score =  265 bits (678), Expect = 2e-69
 Identities = 128/141 (90%), Positives = 133/141 (94%)
 Frame = +1

Query: 40  VASSKQPLQTVKSVDTQSVLKRLQSELMSLMMSGDPGISAFPEEDNIFCWKGTITGSKDT 219
           VA++KQPL   KSVDTQSVLKRLQSELM+LMMSGD GISAFPEEDNIFCWKGTI GSKDT
Sbjct: 17  VAATKQPLPPAKSVDTQSVLKRLQSELMALMMSGDGGISAFPEEDNIFCWKGTINGSKDT 76

Query: 220 VFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDIYGTICLDILQDKWSSAYDVRTIL 399
           VFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVD+YG ICLDILQDKWSSAYDVRTIL
Sbjct: 77  VFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTIL 136

Query: 400 ISIQSLLGEPNTSSPLNAQAA 462
           +SIQSLLGEPN SSPLN QAA
Sbjct: 137 LSIQSLLGEPNISSPLNTQAA 157


>ref|XP_002513536.1| ubiquitin-conjugating enzyme E2 C, putative [Ricinus communis]
           gi|223547444|gb|EEF48939.1| ubiquitin-conjugating enzyme
           E2 C, putative [Ricinus communis]
          Length = 179

 Score =  260 bits (664), Expect = 9e-68
 Identities = 126/140 (90%), Positives = 131/140 (93%)
 Frame = +1

Query: 43  ASSKQPLQTVKSVDTQSVLKRLQSELMSLMMSGDPGISAFPEEDNIFCWKGTITGSKDTV 222
           A SKQ + TVK+VDTQSVLKRLQSELM+LMMSG+ GISAFPEEDNIFCWKGTITGSKDTV
Sbjct: 18  APSKQTVPTVKTVDTQSVLKRLQSELMALMMSGESGISAFPEEDNIFCWKGTITGSKDTV 77

Query: 223 FEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDIYGTICLDILQDKWSSAYDVRTILI 402
           FEGTEYKLSLSFP DYPFKPPKVKFET CFHPNVD+YG ICLDILQDKWSSAYDVRTILI
Sbjct: 78  FEGTEYKLSLSFPNDYPFKPPKVKFETSCFHPNVDVYGNICLDILQDKWSSAYDVRTILI 137

Query: 403 SIQSLLGEPNTSSPLNAQAA 462
           SIQSLLGEPN SSPLN QAA
Sbjct: 138 SIQSLLGEPNISSPLNTQAA 157


>ref|XP_004140207.1| PREDICTED: ubiquitin-conjugating enzyme E2 19-like [Cucumis
           sativus] gi|449482542|ref|XP_004156314.1| PREDICTED:
           ubiquitin-conjugating enzyme E2 19-like [Cucumis
           sativus]
          Length = 181

 Score =  252 bits (644), Expect = 2e-65
 Identities = 120/141 (85%), Positives = 129/141 (91%)
 Frame = +1

Query: 40  VASSKQPLQTVKSVDTQSVLKRLQSELMSLMMSGDPGISAFPEEDNIFCWKGTITGSKDT 219
           V+ +KQ L   K+ D+QSVLKRLQSELM+LMMSGD GISAFPEEDNIFCWKGTITGSK+T
Sbjct: 18  VSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKET 77

Query: 220 VFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDIYGTICLDILQDKWSSAYDVRTIL 399
           VFEGTEY+LS SFP DYPFKPPKVKFETGCFHPNVD+YG ICLDILQDKWSSAYDVRTIL
Sbjct: 78  VFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTIL 137

Query: 400 ISIQSLLGEPNTSSPLNAQAA 462
           +SIQSLLGEPN SSPLN QAA
Sbjct: 138 LSIQSLLGEPNISSPLNTQAA 158


>ref|XP_002314089.1| predicted protein [Populus trichocarpa] gi|118482900|gb|ABK93364.1|
           unknown [Populus trichocarpa]
           gi|222850497|gb|EEE88044.1| predicted protein [Populus
           trichocarpa]
          Length = 179

 Score =  252 bits (644), Expect = 2e-65
 Identities = 121/138 (87%), Positives = 128/138 (92%)
 Frame = +1

Query: 49  SKQPLQTVKSVDTQSVLKRLQSELMSLMMSGDPGISAFPEEDNIFCWKGTITGSKDTVFE 228
           SKQ + + K+VDTQSVLKRLQSELM+LMMSG+ GISAFPE DNIFCWKGTITGSKDTVFE
Sbjct: 19  SKQTVPSAKTVDTQSVLKRLQSELMALMMSGESGISAFPEGDNIFCWKGTITGSKDTVFE 78

Query: 229 GTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDIYGTICLDILQDKWSSAYDVRTILISI 408
           GTEYKLSLSFP DYPFKPPKVKFET CFHPNVD+YG ICLDILQDKWSSAYDVRTIL+SI
Sbjct: 79  GTEYKLSLSFPNDYPFKPPKVKFETSCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSI 138

Query: 409 QSLLGEPNTSSPLNAQAA 462
           QSLLGEPN SSPLN QAA
Sbjct: 139 QSLLGEPNISSPLNTQAA 156


>ref|NP_564572.1| ubiquitin-conjugating enzyme E2 20 [Arabidopsis thaliana]
           gi|297852748|ref|XP_002894255.1| ubiquitin-conjugating
           enzyme 20 [Arabidopsis lyrata subsp. lyrata]
           gi|75329783|sp|Q8L7T3.1|UBC20_ARATH RecName:
           Full=Ubiquitin-conjugating enzyme E2 20; AltName:
           Full=Ubiquitin carrier protein 20
           gi|22530867|gb|AAM96887.1| ubiquitin-conjugating enzyme
           [Arabidopsis thaliana] gi|29028822|gb|AAO64790.1|
           At1g50490 [Arabidopsis thaliana]
           gi|66354450|gb|AAY44860.1| ubiquitinating enzyme
           [Arabidopsis thaliana] gi|110742990|dbj|BAE99389.1|
           putative cyclin-specific ubiquitin carrier protein
           [Arabidopsis thaliana] gi|297340097|gb|EFH70514.1|
           ubiquitin-conjugating enzyme 20 [Arabidopsis lyrata
           subsp. lyrata] gi|332194435|gb|AEE32556.1|
           ubiquitin-conjugating enzyme E2 20 [Arabidopsis
           thaliana]
          Length = 180

 Score =  249 bits (637), Expect = 1e-64
 Identities = 120/138 (86%), Positives = 125/138 (90%)
 Frame = +1

Query: 49  SKQPLQTVKSVDTQSVLKRLQSELMSLMMSGDPGISAFPEEDNIFCWKGTITGSKDTVFE 228
           SKQP    K+VD+QSVLKRLQSELM LMM G PGISAFPEEDNIFCWKGTITGSKDTVFE
Sbjct: 21  SKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFE 80

Query: 229 GTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDIYGTICLDILQDKWSSAYDVRTILISI 408
           GTEY+LSLSF  DYPFKPPKVKFET CFHPNVD+YG ICLDILQDKWSSAYDVRTIL+SI
Sbjct: 81  GTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSI 140

Query: 409 QSLLGEPNTSSPLNAQAA 462
           QSLLGEPN SSPLN QAA
Sbjct: 141 QSLLGEPNISSPLNTQAA 158


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