BLASTX nr result

ID: Cnidium21_contig00032435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032435
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006665990.1| cytochrome c oxidase subunit 2 (mitochondrio...    76   2e-12
gb|AAB88906.1| cytochrome c oxidase subunit II [Brassica rapa su...    76   2e-12
dbj|BAD83476.2| cytochrome oxidase subunit 2 (mitochondrion) [Ni...    76   2e-12
ref|NP_064061.2| cox2 gene product (mitochondrion) [Beta vulgari...    76   2e-12
ref|YP_006460161.1| cytochrome c oxidase subunit II (mitochondri...    74   9e-12

>ref|YP_006665990.1| cytochrome c oxidase subunit 2 (mitochondrion) [Raphanus sativus]
           gi|2687657|gb|AAB88867.1| cytochrome c oxidase subunit
           II [Raphanus sativus] gi|400278265|dbj|BAM36189.1|
           cytochrome c oxidase subunit 2 (mitochondrion) [Raphanus
           sativus] gi|400278309|dbj|BAM36232.1| cytochrome c
           oxidase subunit 2 (mitochondrion) [Raphanus sativus]
          Length = 260

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = -2

Query: 357 SEICGTNHAFMPIVVEAVSRKDYGSWVSNQLIPQT 253
           SEICGTNHAFMPIVVEAVSRKDYGSWVSNQLIPQT
Sbjct: 223 SEICGTNHAFMPIVVEAVSRKDYGSWVSNQLIPQT 257


>gb|AAB88906.1| cytochrome c oxidase subunit II [Brassica rapa subsp. campestris]
          Length = 260

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = -2

Query: 357 SEICGTNHAFMPIVVEAVSRKDYGSWVSNQLIPQT 253
           SEICGTNHAFMPIVVEAVSRKDYGSWVSNQLIPQT
Sbjct: 223 SEICGTNHAFMPIVVEAVSRKDYGSWVSNQLIPQT 257


>dbj|BAD83476.2| cytochrome oxidase subunit 2 (mitochondrion) [Nicotiana tabacum]
          Length = 260

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = -2

Query: 357 SEICGTNHAFMPIVVEAVSRKDYGSWVSNQLIPQT 253
           SEICGTNHAFMPIVVEAVSRKDYGSWVSNQLIPQT
Sbjct: 223 SEICGTNHAFMPIVVEAVSRKDYGSWVSNQLIPQT 257


>ref|NP_064061.2| cox2 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435041|ref|YP_004222256.1| cytochrome c oxidase
           subunit 2 [Beta vulgaris subsp. maritima]
           gi|346683134|ref|YP_004842063.1| cytochrome c oxidase
           subunit 2 [Beta macrocarpa] gi|87248025|gb|ABD36067.1|
           cytochrome oxidase subunit 2 [Beta vulgaris subsp.
           vulgaris] gi|148491430|dbj|BAA99453.2| cytochrome c
           oxidase subunit 2 [Beta vulgaris subsp. vulgaris]
           gi|317905694|emb|CBJ14086.1| cytochrome c oxidase
           subunit 2 [Beta vulgaris subsp. maritima]
           gi|319439774|emb|CBJ17495.1| cytochrome c oxidase
           subunit 2 [Beta vulgaris subsp. maritima]
           gi|345500052|emb|CBX24868.1| cytochrome c oxidase
           subunit 2 [Beta macrocarpa] gi|384939216|emb|CBL52062.2|
           cytochrome c oxidase subunit 2 (mitochondrion) [Beta
           vulgaris subsp. maritima]
          Length = 260

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = -2

Query: 357 SEICGTNHAFMPIVVEAVSRKDYGSWVSNQLIPQT 253
           SEICGTNHAFMPIVVEAVSRKDYGSWVSNQLIPQT
Sbjct: 223 SEICGTNHAFMPIVVEAVSRKDYGSWVSNQLIPQT 257


>ref|YP_006460161.1| cytochrome c oxidase subunit II (mitochondrion) [Mimulus guttatus]
           gi|340007652|gb|AEK26516.1| cytochrome c oxidase subunit
           2 (mitochondrion) [Mimulus guttatus]
          Length = 260

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/35 (97%), Positives = 34/35 (97%)
 Frame = -2

Query: 357 SEICGTNHAFMPIVVEAVSRKDYGSWVSNQLIPQT 253
           SEICGTNHAFMPIVVEAV RKDYGSWVSNQLIPQT
Sbjct: 223 SEICGTNHAFMPIVVEAVPRKDYGSWVSNQLIPQT 257


Top