BLASTX nr result

ID: Cnidium21_contig00032394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032394
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263259.1| PREDICTED: uncharacterized protein LOC100253...   110   2e-22
ref|XP_002521950.1| synovial sarcoma associated ss18 protein, pu...   107   2e-21
ref|XP_002332027.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21
ref|XP_002319091.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21
gb|ABK94681.1| unknown [Populus trichocarpa]                          107   2e-21

>ref|XP_002263259.1| PREDICTED: uncharacterized protein LOC100253609 [Vitis vinifera]
          Length = 223

 Score =  110 bits (275), Expect = 2e-22
 Identities = 83/192 (43%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
 Frame = -1

Query: 604 NKSLILRIVESQNSGKLSECAENQAKLQRNLMYLAAIADSQPQPPTMHSQFQQSTMMXXX 425
           NKSLIL+IVESQNSGKL+ECAENQA+LQRNLMYLAAIADSQPQPPTMH+QF  S ++   
Sbjct: 32  NKSLILKIVESQNSGKLTECAENQARLQRNLMYLAAIADSQPQPPTMHAQFPPSGIV--Q 89

Query: 424 XXXXXXXXXXXXQMTPQALMAAR--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 251
                       QMTPQ+L+AAR                                     
Sbjct: 90  PGAHYMQHQQAQQMTPQSLLAARSSMLYSQQPFSALQQQQAIHSQLGMGSGGSAGLHMLQ 149

Query: 250 XXXXXXXXXXXXXXXGFPDFGR---GEGLSMAGR---GGNKQDM-XXXXXXXXXXXXXXX 92
                          GFPDF R   GEGL  AGR   GG+KQDM                
Sbjct: 150 SEGSNPGGNGTLGTGGFPDFSRGTSGEGLQAAGRGMAGGSKQDMGNAEGRGGNSGGQGGD 209

Query: 91  XSETHYLKSADD 56
             ET YLK+A+D
Sbjct: 210 GGETLYLKAAED 221


>ref|XP_002521950.1| synovial sarcoma associated ss18 protein, putative [Ricinus
           communis] gi|223538754|gb|EEF40354.1| synovial sarcoma
           associated ss18 protein, putative [Ricinus communis]
          Length = 219

 Score =  107 bits (266), Expect = 2e-21
 Identities = 58/83 (69%), Positives = 64/83 (77%)
 Frame = -1

Query: 604 NKSLILRIVESQNSGKLSECAENQAKLQRNLMYLAAIADSQPQPPTMHSQFQQSTMMXXX 425
           NKSLIL+IVESQNSGK+SECAENQA+LQRNLMYLAAIADSQPQPP MHSQF  S +M   
Sbjct: 32  NKSLILKIVESQNSGKISECAENQARLQRNLMYLAAIADSQPQPPNMHSQFSSSGIM--Q 89

Query: 424 XXXXXXXXXXXXQMTPQALMAAR 356
                       QMTPQ++MAAR
Sbjct: 90  PGAHYMQHQQAQQMTPQSVMAAR 112


>ref|XP_002332027.1| predicted protein [Populus trichocarpa] gi|222875252|gb|EEF12383.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  107 bits (266), Expect = 2e-21
 Identities = 59/83 (71%), Positives = 64/83 (77%)
 Frame = -1

Query: 604 NKSLILRIVESQNSGKLSECAENQAKLQRNLMYLAAIADSQPQPPTMHSQFQQSTMMXXX 425
           NKSLIL+IVESQNSGKLSECAENQA+LQ+NLMYLAAIAD QPQPPTMH+QF  S +M   
Sbjct: 32  NKSLILKIVESQNSGKLSECAENQARLQQNLMYLAAIADCQPQPPTMHAQFPSSGIM--Q 89

Query: 424 XXXXXXXXXXXXQMTPQALMAAR 356
                       QMTPQALMAAR
Sbjct: 90  PGAHYMQHQQAQQMTPQALMAAR 112


>ref|XP_002319091.1| predicted protein [Populus trichocarpa] gi|222857467|gb|EEE95014.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  107 bits (266), Expect = 2e-21
 Identities = 59/83 (71%), Positives = 64/83 (77%)
 Frame = -1

Query: 604 NKSLILRIVESQNSGKLSECAENQAKLQRNLMYLAAIADSQPQPPTMHSQFQQSTMMXXX 425
           NKSLIL+IVESQN GKLSECAENQA+LQRNLMYLAAIADSQP PPTMH+QF  S++M   
Sbjct: 32  NKSLILKIVESQNLGKLSECAENQARLQRNLMYLAAIADSQPPPPTMHAQFPSSSIM--Q 89

Query: 424 XXXXXXXXXXXXQMTPQALMAAR 356
                       QMTPQALMAAR
Sbjct: 90  PGAHYMQHQQAQQMTPQALMAAR 112


>gb|ABK94681.1| unknown [Populus trichocarpa]
          Length = 213

 Score =  107 bits (266), Expect = 2e-21
 Identities = 59/83 (71%), Positives = 64/83 (77%)
 Frame = -1

Query: 604 NKSLILRIVESQNSGKLSECAENQAKLQRNLMYLAAIADSQPQPPTMHSQFQQSTMMXXX 425
           NKSLIL+IVESQNSGKLSECAENQA+LQ+NLMYLAAIAD QPQPPTMH+QF  S +M   
Sbjct: 25  NKSLILKIVESQNSGKLSECAENQARLQQNLMYLAAIADCQPQPPTMHAQFPSSGIM--Q 82

Query: 424 XXXXXXXXXXXXQMTPQALMAAR 356
                       QMTPQALMAAR
Sbjct: 83  PGAHYMQHQQAQQMTPQALMAAR 105


Top