BLASTX nr result

ID: Cnidium21_contig00032375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032375
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   117   7e-25
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   106   2e-21
emb|CBI16834.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera]    73   3e-11

>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
           vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
           uncharacterized protein LOC100268141 isoform 2 [Vitis
           vinifera]
          Length = 647

 Score =  117 bits (294), Expect = 7e-25
 Identities = 65/142 (45%), Positives = 71/142 (50%)
 Frame = +2

Query: 2   HPQGMMGTGFDPTYMXXXXXXXXXXXXXXXXXXXXXXNVNAMGLAGVSPHVNPAFFXXXX 181
           HPQGMMG+GFDPTYM                       VN MGLAGV+PHVNPAFF    
Sbjct: 421 HPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGRGM 480

Query: 182 XXXXXXXXXXXXXXXXXHAAMWNDANMGGWRGEEHGQRTRESSXXXXXXXXXXXXXXXXX 361
                            HA MW D +MGGW GEEHG+RTRESS                 
Sbjct: 481 AANGMGMMGATGMDGH-HAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNH 539

Query: 362 XKGARSNAASREKERVSDREWS 427
            K  RSN ASREKER S+R+WS
Sbjct: 540 EKVGRSNTASREKERGSERDWS 561


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
           gi|223546091|gb|EEF47594.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 644

 Score =  106 bits (264), Expect = 2e-21
 Identities = 63/141 (44%), Positives = 71/141 (50%)
 Frame = +2

Query: 5   PQGMMGTGFDPTYMXXXXXXXXXXXXXXXXXXXXXXNVNAMGLAGVSPHVNPAFFXXXXX 184
           PQ MM  GFDPTYM                       VNAMGLAGV+PHVNPAFF     
Sbjct: 417 PQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFF-GRGM 475

Query: 185 XXXXXXXXXXXXXXXXHAAMWNDANMGGWRGEEHGQRTRESSXXXXXXXXXXXXXXXXXX 364
                           +A MW+D +MGGW GEE G+RTRESS                  
Sbjct: 476 APNGMGMMGPSGMDGPNAGMWSDTSMGGW-GEEPGRRTRESSYGGDDGASEYGYGEVNHE 534

Query: 365 KGARSNAASREKERVSDREWS 427
           KGARS+AASREKER S+R+WS
Sbjct: 535 KGARSSAASREKERASERDWS 555


>emb|CBI16834.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 59/142 (41%), Positives = 64/142 (45%)
 Frame = +2

Query: 2   HPQGMMGTGFDPTYMXXXXXXXXXXXXXXXXXXXXXXNVNAMGLAGVSPHVNPAFFXXXX 181
           HPQGMMG+GFDPTYM                       VN MGLAGV+PHVNPAFF    
Sbjct: 296 HPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGRGM 355

Query: 182 XXXXXXXXXXXXXXXXXHAAMWNDANMGGWRGEEHGQRTRESSXXXXXXXXXXXXXXXXX 361
                                   AN  G  GEEHG+RTRESS                 
Sbjct: 356 A-----------------------ANGMGMMGEEHGRRTRESSYGGDDGASDYGYGEVNH 392

Query: 362 XKGARSNAASREKERVSDREWS 427
            K  RSN ASREKER S+R+WS
Sbjct: 393 EKVGRSNTASREKERGSERDWS 414


>ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 52/142 (36%), Positives = 58/142 (40%)
 Frame = +2

Query: 2   HPQGMMGTGFDPTYMXXXXXXXXXXXXXXXXXXXXXXNVNAMGLAGVSPHVNPAFFXXXX 181
           H QGMMG GFDP YM                       VN+MGLAGV+PHVNPAFF    
Sbjct: 366 HHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGM 425

Query: 182 XXXXXXXXXXXXXXXXXHAAMWNDANMGGWRGEEHGQRTRESSXXXXXXXXXXXXXXXXX 361
                                 N   M    G E     +ESS                 
Sbjct: 426 AP--------------------NGMGMMASSGMEGPNPGKESSYDGDEGASEYGYGEGNH 465

Query: 362 XKGARSNAASREKERVSDREWS 427
            KGARS+ ASREKERVS+R+WS
Sbjct: 466 EKGARSSGASREKERVSERDWS 487


>emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera]
          Length = 168

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/65 (53%), Positives = 39/65 (60%)
 Frame = +2

Query: 233 HAAMWNDANMGGWRGEEHGQRTRESSXXXXXXXXXXXXXXXXXXKGARSNAASREKERVS 412
           HA MW D +MGGW GEEHG+RTRESS                  K  RSN ASREKER S
Sbjct: 18  HAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTASREKERGS 77

Query: 413 DREWS 427
           +R+WS
Sbjct: 78  ERDWS 82


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