BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032314
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22115.3| unnamed protein product [Vitis vinifera]              391   e-107
ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containi...   391   e-107
ref|XP_002532083.1| pentatricopeptide repeat-containing protein,...   373   e-101
ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containi...   369   e-100
ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata] g...   368   e-100

>emb|CBI22115.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  391 bits (1005), Expect = e-107
 Identities = 193/221 (87%), Positives = 208/221 (94%)
 Frame = +3

Query: 3   EIDTQTYNCLITFFLNKGLPYKAFEIYESMELAGCSLDGSTYELMIPSLAKSGRLDAASK 182
           +IDT TYN LIT FLNKGLPYKAFE+YESME AGC LDGSTYELMIPSLAKSGRLDAA K
Sbjct: 194 KIDTATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFK 253

Query: 183 LFQEMKAKGMRPGYAIFAALVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMFVSLIDSFV 362
           LFQEMK K +RP + +FA+LVDSMGKAGRLDTSMKVYMEMQGFGLRPSATM+VSLI+SFV
Sbjct: 254 LFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFV 313

Query: 363 KAGKLGTALKLWDEMKKAGFRPNYGLYTVIVESHAKSGKLEIAMSVFSDMEKAGFLPTPS 542
           KAGKL TAL++WDEMKKAGFRPNYGLYT++VESHAKSGKLE AMSVFSDMEKAGFLPTPS
Sbjct: 314 KAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDMEKAGFLPTPS 373

Query: 543 TYSCLLEMHAATGQVDFAMKLYNSMTNAGLRPGLSTYTSLL 665
           TYSCLLEMH+A+GQVD AMKLYNSMTNAGLRPGLSTYT+LL
Sbjct: 374 TYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPGLSTYTALL 414



 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 49/177 (27%), Positives = 98/177 (55%)
 Frame = +3

Query: 135 MIPSLAKSGRLDAASKLFQEMKAKGMRPGYAIFAALVDSMGKAGRLDTSMKVYMEMQGFG 314
           ++  LAK+ +L+ A   F++++  G +   A + +L+      G    + +VY  M+  G
Sbjct: 168 VVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESMEAAG 227

Query: 315 LRPSATMFVSLIDSFVKAGKLGTALKLWDEMKKAGFRPNYGLYTVIVESHAKSGKLEIAM 494
                + +  +I S  K+G+L  A KL+ EMK+   RP++ ++  +V+S  K+G+L+ +M
Sbjct: 228 CLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSM 287

Query: 495 SVFSDMEKAGFLPTPSTYSCLLEMHAATGQVDFAMKLYNSMTNAGLRPGLSTYTSLL 665
            V+ +M+  G  P+ + Y  L+E     G+++ A+++++ M  AG RP    YT ++
Sbjct: 288 KVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVV 344


>ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Vitis vinifera]
          Length = 844

 Score =  391 bits (1005), Expect = e-107
 Identities = 193/221 (87%), Positives = 208/221 (94%)
 Frame = +3

Query: 3   EIDTQTYNCLITFFLNKGLPYKAFEIYESMELAGCSLDGSTYELMIPSLAKSGRLDAASK 182
           +IDT TYN LIT FLNKGLPYKAFE+YESME AGC LDGSTYELMIPSLAKSGRLDAA K
Sbjct: 281 KIDTATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFK 340

Query: 183 LFQEMKAKGMRPGYAIFAALVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMFVSLIDSFV 362
           LFQEMK K +RP + +FA+LVDSMGKAGRLDTSMKVYMEMQGFGLRPSATM+VSLI+SFV
Sbjct: 341 LFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFV 400

Query: 363 KAGKLGTALKLWDEMKKAGFRPNYGLYTVIVESHAKSGKLEIAMSVFSDMEKAGFLPTPS 542
           KAGKL TAL++WDEMKKAGFRPNYGLYT++VESHAKSGKLE AMSVFSDMEKAGFLPTPS
Sbjct: 401 KAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDMEKAGFLPTPS 460

Query: 543 TYSCLLEMHAATGQVDFAMKLYNSMTNAGLRPGLSTYTSLL 665
           TYSCLLEMH+A+GQVD AMKLYNSMTNAGLRPGLSTYT+LL
Sbjct: 461 TYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPGLSTYTALL 501



 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 49/177 (27%), Positives = 98/177 (55%)
 Frame = +3

Query: 135 MIPSLAKSGRLDAASKLFQEMKAKGMRPGYAIFAALVDSMGKAGRLDTSMKVYMEMQGFG 314
           ++  LAK+ +L+ A   F++++  G +   A + +L+      G    + +VY  M+  G
Sbjct: 255 VVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESMEAAG 314

Query: 315 LRPSATMFVSLIDSFVKAGKLGTALKLWDEMKKAGFRPNYGLYTVIVESHAKSGKLEIAM 494
                + +  +I S  K+G+L  A KL+ EMK+   RP++ ++  +V+S  K+G+L+ +M
Sbjct: 315 CLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSM 374

Query: 495 SVFSDMEKAGFLPTPSTYSCLLEMHAATGQVDFAMKLYNSMTNAGLRPGLSTYTSLL 665
            V+ +M+  G  P+ + Y  L+E     G+++ A+++++ M  AG RP    YT ++
Sbjct: 375 KVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVV 431


>ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528243|gb|EEF30297.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 841

 Score =  373 bits (957), Expect = e-101
 Identities = 182/221 (82%), Positives = 204/221 (92%)
 Frame = +3

Query: 3   EIDTQTYNCLITFFLNKGLPYKAFEIYESMELAGCSLDGSTYELMIPSLAKSGRLDAASK 182
           +IDTQTYN LIT FLNKGLPYKAFEIYESM+ A CSLD STYELMIPSLAKSGRLD A K
Sbjct: 285 KIDTQTYNALITSFLNKGLPYKAFEIYESMQAAQCSLDASTYELMIPSLAKSGRLDVAFK 344

Query: 183 LFQEMKAKGMRPGYAIFAALVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMFVSLIDSFV 362
           LFQEMK + +RP + IF++LVDSMGK+GRLDTSMK+YMEMQGFGLR SA+M+VSLI+S+ 
Sbjct: 345 LFQEMKERKIRPSFGIFSSLVDSMGKSGRLDTSMKIYMEMQGFGLRSSASMYVSLIESYT 404

Query: 363 KAGKLGTALKLWDEMKKAGFRPNYGLYTVIVESHAKSGKLEIAMSVFSDMEKAGFLPTPS 542
           KAGKL TAL+LWDEMKKAGFRPNYGLYT+I+ESHAKSGKL+IA S+F DM+KAGFLPTPS
Sbjct: 405 KAGKLDTALRLWDEMKKAGFRPNYGLYTLIIESHAKSGKLDIATSIFKDMDKAGFLPTPS 464

Query: 543 TYSCLLEMHAATGQVDFAMKLYNSMTNAGLRPGLSTYTSLL 665
           TYSCLLEMHAA+GQVD AMKLYNSMTNAGL+PGLSTYT+LL
Sbjct: 465 TYSCLLEMHAASGQVDSAMKLYNSMTNAGLKPGLSTYTALL 505



 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
 Frame = +3

Query: 111 LDGSTYELMIPSLAKSGRLDAASKLFQEM---KAKGMRPGYAIFAALVDSMGKAGRLDTS 281
           +D   Y L+   L K    D    LF EM    +KG       +  ++  + KA +L+ S
Sbjct: 213 VDDECYALLFDGLNKIRDFDGIQSLFDEMVQDSSKGGISSVYAYNRVIQHLAKAEKLELS 272

Query: 282 MKVYMEMQGFGLRPSATMFVSLIDSFVKAGKLGTALKLWDEMKKAGFRPNYGLYTVIVES 461
              + ++Q  G +     + +LI SF+  G    A ++++ M+ A    +   Y +++ S
Sbjct: 273 FCCFKKVQDSGCKIDTQTYNALITSFLNKGLPYKAFEIYESMQAAQCSLDASTYELMIPS 332

Query: 462 HAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATGQVDFAMKLYNSMTNAGLRPG 641
            AKSG+L++A  +F +M++    P+   +S L++    +G++D +MK+Y  M   GLR  
Sbjct: 333 LAKSGRLDVAFKLFQEMKERKIRPSFGIFSSLVDSMGKSGRLDTSMKIYMEMQGFGLRSS 392

Query: 642 LSTYTSLL 665
            S Y SL+
Sbjct: 393 ASMYVSLI 400


>ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Glycine max]
          Length = 752

 Score =  369 bits (946), Expect = e-100
 Identities = 178/221 (80%), Positives = 204/221 (92%)
 Frame = +3

Query: 3   EIDTQTYNCLITFFLNKGLPYKAFEIYESMELAGCSLDGSTYELMIPSLAKSGRLDAASK 182
           ++DT+TYN LIT FLNKGLPYKAFE+YESME AGCSLDGSTYELMIP+LAKSGRLDAA K
Sbjct: 191 KVDTETYNSLITLFLNKGLPYKAFEMYESMEKAGCSLDGSTYELMIPNLAKSGRLDAAFK 250

Query: 183 LFQEMKAKGMRPGYAIFAALVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMFVSLIDSFV 362
           LFQEMK +G RPG  +FA+LVDSMGKAGRLD++MKVYMEM+G+G +P  T++VSLI+S+V
Sbjct: 251 LFQEMKVRGFRPGLNVFASLVDSMGKAGRLDSAMKVYMEMRGYGYKPPPTIYVSLIESYV 310

Query: 363 KAGKLGTALKLWDEMKKAGFRPNYGLYTVIVESHAKSGKLEIAMSVFSDMEKAGFLPTPS 542
           K+GKL TAL+LWDEM+ AGFRPN+GLYT+I+ESHAKSGKLEIAMS F DMEKAGFLPTPS
Sbjct: 311 KSGKLETALRLWDEMRMAGFRPNFGLYTLIIESHAKSGKLEIAMSTFLDMEKAGFLPTPS 370

Query: 543 TYSCLLEMHAATGQVDFAMKLYNSMTNAGLRPGLSTYTSLL 665
           TY+CLLEMHAA+GQ+D AMKLYNSMTNAGLRPGLSTYT LL
Sbjct: 371 TYACLLEMHAASGQIDPAMKLYNSMTNAGLRPGLSTYTVLL 411



 Score =  102 bits (254), Expect = 7e-20
 Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 6/220 (2%)
 Frame = +3

Query: 24  NCLITFF--LNKGLPYKAFEIYESMELAGCSLDG----STYELMIPSLAKSGRLDAASKL 185
           +C +  F  LN+   ++  ++    E+ G S DG    +    +I  LAK+ +L+ +   
Sbjct: 123 DCYVMLFDGLNQKRDFEGIQLLFD-EMVGDSADGVSLFAACNRVIRYLAKAEKLEVSFCC 181

Query: 186 FQEMKAKGMRPGYAIFAALVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMFVSLIDSFVK 365
           F+++   G +     + +L+      G    + ++Y  M+  G     + +  +I +  K
Sbjct: 182 FKKILNAGCKVDTETYNSLITLFLNKGLPYKAFEMYESMEKAGCSLDGSTYELMIPNLAK 241

Query: 366 AGKLGTALKLWDEMKKAGFRPNYGLYTVIVESHAKSGKLEIAMSVFSDMEKAGFLPTPST 545
           +G+L  A KL+ EMK  GFRP   ++  +V+S  K+G+L+ AM V+ +M   G+ P P+ 
Sbjct: 242 SGRLDAAFKLFQEMKVRGFRPGLNVFASLVDSMGKAGRLDSAMKVYMEMRGYGYKPPPTI 301

Query: 546 YSCLLEMHAATGQVDFAMKLYNSMTNAGLRPGLSTYTSLL 665
           Y  L+E +  +G+++ A++L++ M  AG RP    YT ++
Sbjct: 302 YVSLIESYVKSGKLETALRLWDEMRMAGFRPNFGLYTLII 341



 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 57/215 (26%), Positives = 100/215 (46%)
 Frame = +3

Query: 21  YNCLITFFLNKGLPYKAFEIYESMELAGCSLDGSTYELMIPSLAKSGRLDAASKLFQEMK 200
           Y  LI  ++  G    A  +++ M +AG   +   Y L+I S AKSG+L+ A   F +M+
Sbjct: 302 YVSLIESYVKSGKLETALRLWDEMRMAGFRPNFGLYTLIIESHAKSGKLEIAMSTFLDME 361

Query: 201 AKGMRPGYAIFAALVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMFVSLIDSFVKAGKLG 380
             G  P  + +A L++    +G++D +MK+Y  M   GLRP  + +  L+        + 
Sbjct: 362 KAGFLPTPSTYACLLEMHAASGQIDPAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVD 421

Query: 381 TALKLWDEMKKAGFRPNYGLYTVIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLL 560
            A K+  EMK  G+  +     +++  + K G +++A+     M  +G          L 
Sbjct: 422 VAAKILLEMKAMGYSVDVTASDILM-VYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLF 480

Query: 561 EMHAATGQVDFAMKLYNSMTNAGLRPGLSTYTSLL 665
           E    +G  + A  L  +  N+  +  L  YTS+L
Sbjct: 481 ESCMKSGLFESAKPLLETYVNSAAKVDLILYTSIL 515


>ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
           gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 832

 Score =  368 bits (945), Expect = e-100
 Identities = 181/221 (81%), Positives = 202/221 (91%)
 Frame = +3

Query: 3   EIDTQTYNCLITFFLNKGLPYKAFEIYESMELAGCSLDGSTYELMIPSLAKSGRLDAASK 182
           +IDTQTYN L+  FLNKGLPYKAFEIYESME     LDGSTYEL+IPSLAKSGRLDAA K
Sbjct: 271 KIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFK 330

Query: 183 LFQEMKAKGMRPGYAIFAALVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMFVSLIDSFV 362
           LFQ+MK + +RP +++F++LVDSMGKAGRLDTSMKVYMEMQGFG RPSATMFVSLIDS+ 
Sbjct: 331 LFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYA 390

Query: 363 KAGKLGTALKLWDEMKKAGFRPNYGLYTVIVESHAKSGKLEIAMSVFSDMEKAGFLPTPS 542
           KAGKL TAL+LWDEMKK+GFRPN+GLYT+I+ESHAKSGKLE+AMSVF DMEKAGFLPTPS
Sbjct: 391 KAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMSVFKDMEKAGFLPTPS 450

Query: 543 TYSCLLEMHAATGQVDFAMKLYNSMTNAGLRPGLSTYTSLL 665
           TYSCLLEMHA +GQVD AMK+YNSMTNAGLRPGLS+Y SLL
Sbjct: 451 TYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL 491



 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 49/189 (25%), Positives = 103/189 (54%)
 Frame = +3

Query: 69  AFEIYESMELAGCSLDGSTYELMIPSLAKSGRLDAASKLFQEMKAKGMRPGYAIFAALVD 248
           + ++Y  M+  G     + +  +I S AK+G+LD A +L+ EMK  G RP + ++  +++
Sbjct: 363 SMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIE 422

Query: 249 SMGKAGRLDTSMKVYMEMQGFGLRPSATMFVSLIDSFVKAGKLGTALKLWDEMKKAGFRP 428
           S  K+G+L+ +M V+ +M+  G  P+ + +  L++    +G++ +A+K+++ M  AG RP
Sbjct: 423 SHAKSGKLEVAMSVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRP 482

Query: 429 NYGLYTVIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATGQVDFAMKLY 608
               Y  ++   A    +++A  +  +M+  G+       S +L ++     VD A+K  
Sbjct: 483 GLSSYISLLTLLANKRLVDVAGKILLEMKAMGY-SVDVCASDVLMIYIKDASVDLALKWL 541

Query: 609 NSMTNAGLR 635
             M ++G++
Sbjct: 542 RFMGSSGIK 550



 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 54/212 (25%), Positives = 102/212 (48%)
 Frame = +3

Query: 30   LITFFLNKGLPYKAFEIYESMELAGCSLDGSTYELMIPSLAKSGRLDAASKLFQEMKAKG 209
            LI  +   G    A  +++ M+ +G   +   Y ++I S AKSG+L+ A  +F++M+  G
Sbjct: 385  LIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMSVFKDMEKAG 444

Query: 210  MRPGYAIFAALVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMFVSLIDSFVKAGKLGTAL 389
              P  + ++ L++    +G++D++MK+Y  M   GLRP  + ++SL+        +  A 
Sbjct: 445  FLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAG 504

Query: 390  KLWDEMKKAGFRPNYGLYTVIVESHAKSGKLEIAMSVFSDMEKAGFLPTPSTYSCLLEMH 569
            K+  EMK  G+  +     V++  + K   +++A+     M  +G          L E  
Sbjct: 505  KILLEMKAMGYSVDVCASDVLM-IYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESC 563

Query: 570  AATGQVDFAMKLYNSMTNAGLRPGLSTYTSLL 665
               G  D A  L  ++ ++  +  L  YTS+L
Sbjct: 564  MKNGLYDSARPLLETLVHSAGKVDLVLYTSIL 595



 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
 Frame = +3

Query: 126 YELMIPSLAKSGRLDAASKLFQEMKAKGMRPGYAIFAA---LVDSMGKAGRLDTSMKVYM 296
           Y ++   L +         LF+EM       G   F A   ++  + KA +L+ +   + 
Sbjct: 204 YVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFGAYNQVIQYLAKAEKLEVAFCCFK 263

Query: 297 EMQGFGLRPSATMFVSLIDSFVKAGKLGTALKLWDEMKKAGFRPNYGLYTVIVESHAKSG 476
           + Q  G +     + +L+  F+  G    A ++++ M+K     +   Y +I+ S AKSG
Sbjct: 264 KAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSG 323

Query: 477 KLEIAMSVFSDMEKAGFLPTPSTYSCLLEMHAATGQVDFAMKLYNSMTNAGLRPGLSTYT 656
           +L+ A  +F  M++    P+ S +S L++     G++D +MK+Y  M   G RP  + + 
Sbjct: 324 RLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFV 383

Query: 657 SLL 665
           SL+
Sbjct: 384 SLI 386