BLASTX nr result
ID: Cnidium21_contig00032306
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00032306
(594 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi... 224 1e-56
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera] 219 2e-55
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,... 203 2e-50
ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containi... 195 6e-48
ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|2... 194 7e-48
>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Vitis vinifera]
Length = 547
Score = 224 bits (570), Expect = 1e-56
Identities = 113/195 (57%), Positives = 139/195 (71%)
Frame = +3
Query: 3 KIEEAIELFSEMEYEGLKPYDETFNHLILGCSRAGRLEDSLRFCESMVDAGLVSSCVAFN 182
+IEEA EL +ME GL PYDETFN LI GCS+AGRLE+ LR CE M+ GLV SC AFN
Sbjct: 346 RIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFN 405
Query: 183 ELVQRMCDGRFTKRADEMLTSLLDKGFVPNEQTYSRLIAGYQKEGNLQGVLKLYYEMEYK 362
+ ++C+ KRADEMLT LLDKGFVP+E TYS LIA Y K G +Q VLKLYYEMEY+
Sbjct: 406 LMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYR 465
Query: 363 SLPPSTSVFASIIAALCHCGDLEEAEKYLKTMKDKSNVKCLFTYEDLINAHIKKGNKARG 542
SL P F S+I +LC C LE+AEKYL+ MKD+S YE LI+++ +KG++ R
Sbjct: 466 SLSPGLLAFESLIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISSYFEKGDELRA 525
Query: 543 DQLYREMLNSGHKPS 587
QL+ EM++ G KPS
Sbjct: 526 SQLHNEMVSRGLKPS 540
Score = 68.6 bits (166), Expect = 8e-10
Identities = 43/153 (28%), Positives = 75/153 (49%)
Frame = +3
Query: 105 GRLEDSLRFCESMVDAGLVSSCVAFNELVQRMCDGRFTKRADEMLTSLLDKGFVPNEQTY 284
G L+ + E M++ G + + + C + A+E++ + + G +P ++T+
Sbjct: 310 GTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDETF 369
Query: 285 SRLIAGYQKEGNLQGVLKLYYEMEYKSLPPSTSVFASIIAALCHCGDLEEAEKYLKTMKD 464
+ LIAG K G L+ L+L M + L PS F + LC G ++ A++ L + D
Sbjct: 370 NLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVKRADEMLTLLLD 429
Query: 465 KSNVKCLFTYEDLINAHIKKGNKARGDQLYREM 563
K V TY +LI ++ K G + +LY EM
Sbjct: 430 KGFVPDEITYSNLIASYGKLGEIQQVLKLYYEM 462
>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
Length = 642
Score = 219 bits (559), Expect = 2e-55
Identities = 112/188 (59%), Positives = 134/188 (71%)
Frame = +3
Query: 3 KIEEAIELFSEMEYEGLKPYDETFNHLILGCSRAGRLEDSLRFCESMVDAGLVSSCVAFN 182
+IEEA EL +ME GL PYDETFN LI GCS+AGRLE+ LR CE M+ GLV SC AFN
Sbjct: 346 RIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFN 405
Query: 183 ELVQRMCDGRFTKRADEMLTSLLDKGFVPNEQTYSRLIAGYQKEGNLQGVLKLYYEMEYK 362
+ ++C+ KRADEMLT LLDKGFVP+E TYS LIA Y K G +Q VLKLYYEMEY+
Sbjct: 406 LMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYR 465
Query: 363 SLPPSTSVFASIIAALCHCGDLEEAEKYLKTMKDKSNVKCLFTYEDLINAHIKKGNKARG 542
SL P VF SII +LC C LE+AEKYL+ MKD+S YE LI+ + +KG++ R
Sbjct: 466 SLSPGLLVFESIIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISGYFEKGDELRA 525
Query: 543 DQLYREML 566
QL+ EML
Sbjct: 526 SQLHNEML 533
Score = 68.6 bits (166), Expect = 8e-10
Identities = 43/153 (28%), Positives = 75/153 (49%)
Frame = +3
Query: 105 GRLEDSLRFCESMVDAGLVSSCVAFNELVQRMCDGRFTKRADEMLTSLLDKGFVPNEQTY 284
G L+ + E M++ G + + + C + A+E++ + + G +P ++T+
Sbjct: 310 GTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDETF 369
Query: 285 SRLIAGYQKEGNLQGVLKLYYEMEYKSLPPSTSVFASIIAALCHCGDLEEAEKYLKTMKD 464
+ LIAG K G L+ L+L M + L PS F + LC G ++ A++ L + D
Sbjct: 370 NLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVKRADEMLTLLLD 429
Query: 465 KSNVKCLFTYEDLINAHIKKGNKARGDQLYREM 563
K V TY +LI ++ K G + +LY EM
Sbjct: 430 KGFVPDEITYSNLIASYGKLGEIQQVLKLYYEM 462
>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 619
Score = 203 bits (517), Expect = 2e-50
Identities = 99/194 (51%), Positives = 135/194 (69%)
Frame = +3
Query: 3 KIEEAIELFSEMEYEGLKPYDETFNHLILGCSRAGRLEDSLRFCESMVDAGLVSSCVAFN 182
KIE+A +LF EM GL+PYDETFN LI GC++AGR+E+ L + E M++ GLV S +AFN
Sbjct: 354 KIEKANQLFGEMGTMGLEPYDETFNFLIEGCAKAGRVEECLSYFEKMIERGLVPSLLAFN 413
Query: 183 ELVQRMCDGRFTKRADEMLTSLLDKGFVPNEQTYSRLIAGYQKEGNLQGVLKLYYEMEYK 362
+++ ++C+ +A+ LT LLDKGF P+E TYS L+ GY+++ +Q VLKLYYEMEY+
Sbjct: 414 KMIAKLCETGEVNQANTFLTRLLDKGFSPDETTYSYLMTGYERDNQIQEVLKLYYEMEYR 473
Query: 363 SLPPSTSVFASIIAALCHCGDLEEAEKYLKTMKDKSNVKCLFTYEDLINAHIKKGNKARG 542
L P VF +I +LCHCG LE+AEKYL+ MK +S YE LI H++K + AR
Sbjct: 474 PLSPGLLVFTPLIRSLCHCGKLEQAEKYLRIMKGRSLNPSQQVYEALIAGHLEKSDTARA 533
Query: 543 DQLYREMLNSGHKP 584
QLY EM++ G P
Sbjct: 534 LQLYNEMISKGFTP 547
Score = 68.9 bits (167), Expect = 6e-10
Identities = 41/164 (25%), Positives = 78/164 (47%)
Frame = +3
Query: 72 FNHLILGCSRAGRLEDSLRFCESMVDAGLVSSCVAFNELVQRMCDGRFTKRADEMLTSLL 251
++ ++ R G L+ +L E+M+ G ++ L+ C+G ++A+++ +
Sbjct: 307 YSLIVFAKVRLGNLDSALEVYEAMLKRGFNANSFVHTVLIGAYCNGGKIEKANQLFGEMG 366
Query: 252 DKGFVPNEQTYSRLIAGYQKEGNLQGVLKLYYEMEYKSLPPSTSVFASIIAALCHCGDLE 431
G P ++T++ LI G K G ++ L + +M + L PS F +IA LC G++
Sbjct: 367 TMGLEPYDETFNFLIEGCAKAGRVEECLSYFEKMIERGLVPSLLAFNKMIAKLCETGEVN 426
Query: 432 EAEKYLKTMKDKSNVKCLFTYEDLINAHIKKGNKARGDQLYREM 563
+A +L + DK TY L+ + + +LY EM
Sbjct: 427 QANTFLTRLLDKGFSPDETTYSYLMTGYERDNQIQEVLKLYYEM 470
Score = 55.8 bits (133), Expect = 5e-06
Identities = 32/134 (23%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 KIEEAIELFSEMEYEGLKPYDETFNHLILGCSRAGRLEDSLRFCESMVDAGLVSSCVAFN 182
++ +A + + +G P + T+++L+ G R ++++ L+ M L + F
Sbjct: 424 EVNQANTFLTRLLDKGFSPDETTYSYLMTGYERDNQIQEVLKLYYEMEYRPLSPGLLVFT 483
Query: 183 ELVQRMCDGRFTKRADEMLTSLLDKGFVPNEQTYSRLIAGYQKEGNLQGVLKLYYEMEYK 362
L++ +C ++A++ L + + P++Q Y LIAG+ ++ + L+LY EM K
Sbjct: 484 PLIRSLCHCGKLEQAEKYLRIMKGRSLNPSQQVYEALIAGHLEKSDTARALQLYNEMISK 543
Query: 363 SLPPSTSV-FASII 401
P S F ++I
Sbjct: 544 GFTPCCSYNFGAVI 557
>ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cucumis sativus]
Length = 517
Score = 195 bits (495), Expect = 6e-48
Identities = 97/191 (50%), Positives = 129/191 (67%)
Frame = +3
Query: 3 KIEEAIELFSEMEYEGLKPYDETFNHLILGCSRAGRLEDSLRFCESMVDAGLVSSCVAFN 182
K+EEA L EME GLKPY ETFN LI GC+ +G E+ L CE M++ G + SC FN
Sbjct: 327 KVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLPSCSVFN 386
Query: 183 ELVQRMCDGRFTKRADEMLTSLLDKGFVPNEQTYSRLIAGYQKEGNLQGVLKLYYEMEYK 362
+ ++C+ K+A+ +LT LLDKGF+P+E TY+ LI GY+K G +Q +LKLYYEM +
Sbjct: 387 VAIDKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYEMGAR 446
Query: 363 SLPPSTSVFASIIAALCHCGDLEEAEKYLKTMKDKSNVKCLFTYEDLINAHIKKGNKARG 542
L P SVF ++I +LC G LEEAEKYLK +KD S CL Y+ LI ++KKGN+A+
Sbjct: 447 LLSPGVSVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIYQALILLYLKKGNRAKA 506
Query: 543 DQLYREMLNSG 575
+LY EM+ G
Sbjct: 507 LELYNEMMFDG 517
Score = 64.7 bits (156), Expect = 1e-08
Identities = 44/187 (23%), Positives = 84/187 (44%)
Frame = +3
Query: 3 KIEEAIELFSEMEYEGLKPYDETFNHLILGCSRAGRLEDSLRFCESMVDAGLVSSCVAFN 182
++E+ I L M + + D ++ ++ + G + + E M + G ++ +
Sbjct: 257 RVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYT 316
Query: 183 ELVQRMCDGRFTKRADEMLTSLLDKGFVPNEQTYSRLIAGYQKEGNLQGVLKLYYEMEYK 362
+ C G + A ++ + + G P +T++ LI G G+ + +L + +M +
Sbjct: 317 LFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLER 376
Query: 363 SLPPSTSVFASIIAALCHCGDLEEAEKYLKTMKDKSNVKCLFTYEDLINAHIKKGNKARG 542
PS SVF I +C GD+++A L + DK + TY +LI + K G
Sbjct: 377 GFLPSCSVFNVAIDKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEI 436
Query: 543 DQLYREM 563
+LY EM
Sbjct: 437 LKLYYEM 443
>ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|222848159|gb|EEE85706.1|
predicted protein [Populus trichocarpa]
Length = 556
Score = 194 bits (494), Expect = 7e-48
Identities = 99/193 (51%), Positives = 133/193 (68%)
Frame = +3
Query: 3 KIEEAIELFSEMEYEGLKPYDETFNHLILGCSRAGRLEDSLRFCESMVDAGLVSSCVAFN 182
+IEEA +L EME GLKPY +TFN L+ GC++AGR+E++L +C+ M++ G V S AFN
Sbjct: 353 RIEEANQLLQEMENMGLKPYGDTFNFLLEGCAKAGRVEETLSYCKKMMEMGHVPSLSAFN 412
Query: 183 ELVQRMCDGRFTKRADEMLTSLLDKGFVPNEQTYSRLIAGYQKEGNLQGVLKLYYEMEYK 362
E+V ++C RA+EMLT+LLD+GF+ +E TYS LI+GY K +Q +LKLYYEMEY+
Sbjct: 413 EMVGKLCRIEDVTRANEMLTNLLDEGFLADEITYSNLISGYAKNNQIQEMLKLYYEMEYR 472
Query: 363 SLPPSTSVFASIIAALCHCGDLEEAEKYLKTMKDKSNVKCLFTYEDLINAHIKKGNKARG 542
SL P F S+I LC+CG LEEAEKYL+ M +S YE LI + +KG+K R
Sbjct: 473 SLSPGLMGFTSLIKGLCNCGKLEEAEKYLRIMIGRSLNPREDVYEALIKVYFEKGDKRRA 532
Query: 543 DQLYREMLNSGHK 581
LY EM++ G K
Sbjct: 533 LNLYNEMVSKGLK 545
Score = 62.0 bits (149), Expect = 7e-08
Identities = 39/187 (20%), Positives = 80/187 (42%)
Frame = +3
Query: 3 KIEEAIELFSEMEYEGLKPYDETFNHLILGCSRAGRLEDSLRFCESMVDAGLVSSCVAFN 182
++E + L M + + ++ ++ + G L +++ E M+ G ++ +
Sbjct: 283 RVEPGLALLKMMLRKNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYT 342
Query: 183 ELVQRMCDGRFTKRADEMLTSLLDKGFVPNEQTYSRLIAGYQKEGNLQGVLKLYYEMEYK 362
+ C + A+++L + + G P T++ L+ G K G ++ L +M
Sbjct: 343 SFIGAYCKEERIEEANQLLQEMENMGLKPYGDTFNFLLEGCAKAGRVEETLSYCKKMMEM 402
Query: 363 SLPPSTSVFASIIAALCHCGDLEEAEKYLKTMKDKSNVKCLFTYEDLINAHIKKGNKARG 542
PS S F ++ LC D+ A + L + D+ + TY +LI+ + K
Sbjct: 403 GHVPSLSAFNEMVGKLCRIEDVTRANEMLTNLLDEGFLADEITYSNLISGYAKNNQIQEM 462
Query: 543 DQLYREM 563
+LY EM
Sbjct: 463 LKLYYEM 469
Score = 60.8 bits (146), Expect = 2e-07
Identities = 39/191 (20%), Positives = 79/191 (41%)
Frame = +3
Query: 3 KIEEAIELFSEMEYEGLKPYDETFNHLILGCSRAGRLEDSLRFCESMVDAGLVSSCVAFN 182
K++ + + ++ + P L+ GR+E L + M+ ++ VA++
Sbjct: 248 KLQTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLKMMLRKNMILDTVAYS 307
Query: 183 ELVQRMCDGRFTKRADEMLTSLLDKGFVPNEQTYSRLIAGYQKEGNLQGVLKLYYEMEYK 362
+V A ++ +L +GF N Y+ I Y KE ++ +L EME
Sbjct: 308 LIVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCKEERIEEANQLLQEMENM 367
Query: 363 SLPPSTSVFASIIAALCHCGDLEEAEKYLKTMKDKSNVKCLFTYEDLINAHIKKGNKARG 542
L P F ++ G +EE Y K M + +V L + +++ + + R
Sbjct: 368 GLKPYGDTFNFLLEGCAKAGRVEETLSYCKKMMEMGHVPSLSAFNEMVGKLCRIEDVTRA 427
Query: 543 DQLYREMLNSG 575
+++ +L+ G
Sbjct: 428 NEMLTNLLDEG 438
Score = 55.8 bits (133), Expect = 5e-06
Identities = 40/168 (23%), Positives = 72/168 (42%)
Frame = +3
Query: 72 FNHLILGCSRAGRLEDSLRFCESMVDAGLVSSCVAFNELVQRMCDGRFTKRADEMLTSLL 251
F+ L+ ++ E C + + S ++FN L+ + + A ++ +L
Sbjct: 166 FDLLVQAYAKQRMFEIGFDVCCRLEEHRFTLSLISFNTLIHVVQKSDKSPLAWKIYEHML 225
Query: 252 DKGFVPNEQTYSRLIAGYQKEGNLQGVLKLYYEMEYKSLPPSTSVFASIIAALCHCGDLE 431
+ PNE T +I+ KEG LQ ++ + ++ K P V ++ + G +E
Sbjct: 226 HRRTYPNEATIESMISALCKEGKLQTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVE 285
Query: 432 EAEKYLKTMKDKSNVKCLFTYEDLINAHIKKGNKARGDQLYREMLNSG 575
LK M K+ + Y ++ A +K GN Q+Y EML G
Sbjct: 286 PGLALLKMMLRKNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRG 333