BLASTX nr result

ID: Cnidium21_contig00032293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032293
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532066.1| importin beta-3, putative [Ricinus communis]...    76   3e-12
ref|XP_002299105.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_004164755.1| PREDICTED: importin-5-like, partial [Cucumis...    75   4e-12
ref|XP_004149646.1| PREDICTED: LOW QUALITY PROTEIN: importin-5-l...    75   4e-12
dbj|BAC83171.1| putative karyopherin-beta 3 variant [Oryza sativ...    75   4e-12

>ref|XP_002532066.1| importin beta-3, putative [Ricinus communis]
           gi|223528270|gb|EEF30321.1| importin beta-3, putative
           [Ricinus communis]
          Length = 1095

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/91 (48%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
 Frame = -2

Query: 265 KATACNMLCCYADEFKEGFFPWIDQVAPTLVPQVLFS*RSQESSCFSHAGAVVFCEISF- 89
           KATACNMLCCYADE KEGFFPWIDQVAPTLVP + F    +       A   +       
Sbjct: 668 KATACNMLCCYADELKEGFFPWIDQVAPTLVPLLKFYFHEEVRKAAVSAMPELLRSAKLA 727

Query: 88  --RGRTCSEEISPILSNCLTTIPALVEALYK 2
             +G +     S +       IPALVEAL+K
Sbjct: 728 VEKGLSQGRNESYVKQLSDYIIPALVEALHK 758


>ref|XP_002299105.1| predicted protein [Populus trichocarpa] gi|222846363|gb|EEE83910.1|
           predicted protein [Populus trichocarpa]
          Length = 1114

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 45/91 (49%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
 Frame = -2

Query: 265 KATACNMLCCYADEFKEGFFPWIDQVAPTLVPQVLFS*RSQESSCFSHAGAVVFCEISF- 89
           KATACNMLCCYADE KEGFFPWIDQVAPTLVP + F    +       A   +       
Sbjct: 687 KATACNMLCCYADELKEGFFPWIDQVAPTLVPLLKFYFHEEVRKAAVSAMPELLRSAKLA 746

Query: 88  --RGRTCSEEISPILSNCLTTIPALVEALYK 2
             +G       S I       IPALVEAL+K
Sbjct: 747 VEKGLAQGRNESYIKQLSDYIIPALVEALHK 777


>ref|XP_004164755.1| PREDICTED: importin-5-like, partial [Cucumis sativus]
          Length = 798

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/97 (45%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
 Frame = -2

Query: 265 KATACNMLCCYADEFKEGFFPWIDQVAPTLVPQVLFS*RSQESSCFSHAGAVVFCEISF- 89
           KATACNMLCCYADE KEGFFPWIDQVAPTLVP + F    +       A   +       
Sbjct: 689 KATACNMLCCYADELKEGFFPWIDQVAPTLVPLLKFYFHEEVRKAAVSAMPELMRSAKLA 748

Query: 88  --------RGRTCSEEISPILSNCLTTIPALVEALYK 2
                   R  T  +++S  +      +PALVEAL+K
Sbjct: 749 VEKGLAQGRNETYIKQLSDYI------VPALVEALHK 779


>ref|XP_004149646.1| PREDICTED: LOW QUALITY PROTEIN: importin-5-like [Cucumis sativus]
          Length = 1116

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/97 (45%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
 Frame = -2

Query: 265 KATACNMLCCYADEFKEGFFPWIDQVAPTLVPQVLFS*RSQESSCFSHAGAVVFCEISF- 89
           KATACNMLCCYADE KEGFFPWIDQVAPTLVP + F    +       A   +       
Sbjct: 689 KATACNMLCCYADELKEGFFPWIDQVAPTLVPLLKFYFHEEVRKAAVSAMPELMRSAKLA 748

Query: 88  --------RGRTCSEEISPILSNCLTTIPALVEALYK 2
                   R  T  +++S  +      +PALVEAL+K
Sbjct: 749 VEKGLAQGRNETYIKQLSDYI------VPALVEALHK 779


>dbj|BAC83171.1| putative karyopherin-beta 3 variant [Oryza sativa Japonica Group]
           gi|50509132|dbj|BAD30239.1| putative karyopherin-beta 3
           variant [Oryza sativa Japonica Group]
          Length = 1123

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/91 (48%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
 Frame = -2

Query: 265 KATACNMLCCYADEFKEGFFPWIDQVAPTLVPQVLFS*RSQESSCFSHAGAVVFCEISF- 89
           KATACNMLCCYADE KEGFFPWIDQVAPTLVP + F    +       A   +       
Sbjct: 695 KATACNMLCCYADELKEGFFPWIDQVAPTLVPLLKFYFHEEVRRAAVAAMPELLRSAKLA 754

Query: 88  --RGRTCSEEISPILSNCLTTIPALVEALYK 2
             +G     + S +       IPALVEAL+K
Sbjct: 755 VEKGLAQGRDESYVKQLSDYIIPALVEALHK 785


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