BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032288
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]         227   9e-58
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty...   206   2e-51
gb|ABA08422.1| polymerase [Zea mays]                                  203   1e-50
emb|CAN63778.1| hypothetical protein VITISV_043746 [Vitis vinifera]   202   2e-50
gb|ABA08423.1| polymerase [Zea mays]                                  201   4e-50

>gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 349

 Score =  227 bits (578), Expect = 9e-58
 Identities = 106/160 (66%), Positives = 132/160 (82%)
 Frame = -2

Query: 481 RNVNGSMLLVQIYVDDIIFGSTDEKLCKRFAKLMQSKYEMSMMGELNYFLGLQVKQVESG 302
           R   G+++LVQIYVDDIIFG+T E +C++F+KLMQSKYE S+MGEL +FLGLQVKQ + G
Sbjct: 74  RKHKGNVILVQIYVDDIIFGATKESMCRKFSKLMQSKYETSLMGELTFFLGLQVKQSDKG 133

Query: 301 IFISQTKYISDLLKKFDLLDCSPAKTPMPTATKLELNTKEMKVDISRYRGMVGSLLYLTA 122
           IFI+Q+KY+ DLLKKFD  +CS  KTPM    KL  +     V+++ YRGM+GSLLYLTA
Sbjct: 134 IFINQSKYVKDLLKKFDFNECSSMKTPMAPPLKLNADPDGKSVNVTSYRGMIGSLLYLTA 193

Query: 121 SRPDIMFATCLCARFQVDPRESHLVAIKQIFRYLKGTPNL 2
           SRPDIMF+TCLCAR+Q +P+ESHL A+K+IFRYLKGTPNL
Sbjct: 194 SRPDIMFSTCLCARYQANPKESHLAAVKRIFRYLKGTPNL 233


>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score =  206 bits (524), Expect = 2e-51
 Identities = 102/161 (63%), Positives = 125/161 (77%), Gaps = 1/161 (0%)
 Frame = -2

Query: 481  RNVNGSMLLVQIYVDDIIFGSTDEKLCKRFAKLMQSKYEMSMMGELNYFLGLQVKQVESG 302
            R +   +L+VQIYVDDIIFGST+  LCK F+KLMQ ++EMSMMGEL +FLG+Q+ Q + G
Sbjct: 1389 RTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEG 1448

Query: 301  IFISQTKYISDLLKKFDLLDCSPAKTPM-PTATKLELNTKEMKVDISRYRGMVGSLLYLT 125
            +++ QTKY  +LLKKF L DC    TPM PT T  + +T  + VD   YRGM+GSLLYLT
Sbjct: 1449 VYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTV-VDQKLYRGMIGSLLYLT 1507

Query: 124  ASRPDIMFATCLCARFQVDPRESHLVAIKQIFRYLKGTPNL 2
            ASRPDI+F+ CLCARFQ DPRESHL A+K+IFRYLKGT NL
Sbjct: 1508 ASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNL 1548


>gb|ABA08422.1| polymerase [Zea mays]
          Length = 236

 Score =  203 bits (517), Expect = 1e-50
 Identities = 97/158 (61%), Positives = 118/158 (74%)
 Frame = -2

Query: 481 RNVNGSMLLVQIYVDDIIFGSTDEKLCKRFAKLMQSKYEMSMMGELNYFLGLQVKQVESG 302
           +  NG + + QIYVDDIIFGST++K C+ F+++M  K+EMSMMGELNYFLG QVKQ++ G
Sbjct: 10  KTCNGDLFVCQIYVDDIIFGSTNQKSCEEFSRVMTQKFEMSMMGELNYFLGFQVKQLKDG 69

Query: 301 IFISQTKYISDLLKKFDLLDCSPAKTPMPTATKLELNTKEMKVDISRYRGMVGSLLYLTA 122
            FISQTKY  DLLK+F + D  PAKTPM T    +LN     VD   YR M+GSLLYL A
Sbjct: 70  TFISQTKYTQDLLKRFGMKDAKPAKTPMGTDGHTDLNKGGKSVDQKAYRSMIGSLLYLCA 129

Query: 121 SRPDIMFATCLCARFQVDPRESHLVAIKQIFRYLKGTP 8
           SRPDIM + C+CARFQ DP+E HLVA+K+I RYL  TP
Sbjct: 130 SRPDIMLSVCMCARFQSDPKECHLVAVKRILRYLVATP 167


>emb|CAN63778.1| hypothetical protein VITISV_043746 [Vitis vinifera]
          Length = 507

 Score =  202 bits (514), Expect = 2e-50
 Identities = 95/154 (61%), Positives = 125/154 (81%)
 Frame = -2

Query: 463 MLLVQIYVDDIIFGSTDEKLCKRFAKLMQSKYEMSMMGELNYFLGLQVKQVESGIFISQT 284
           MLLVQIYVDDIIFG+T+  LC+ F+K M S++EMSMMGELN+FLGLQ+KQ++ G FI+Q 
Sbjct: 17  MLLVQIYVDDIIFGATNNSLCEDFSKCMHSEFEMSMMGELNFFLGLQIKQLKEGTFINQA 76

Query: 283 KYISDLLKKFDLLDCSPAKTPMPTATKLELNTKEMKVDISRYRGMVGSLLYLTASRPDIM 104
           KYI DLLK+F++ +    KTPM ++ KL+++ K   ++ + YRGM+GSLLYLTASRPDIM
Sbjct: 77  KYIKDLLKRFNMEEXKVMKTPMSSSIKLDMDEKGKXIBSTMYRGMIGSLLYLTASRPDIM 136

Query: 103 FATCLCARFQVDPRESHLVAIKQIFRYLKGTPNL 2
           ++ CLCARFQ   +ESHL A+K+I RYLKGT N+
Sbjct: 137 YSVCLCARFQSCXKESHLSAVKRILRYLKGTMNI 170


>gb|ABA08423.1| polymerase [Zea mays]
          Length = 236

 Score =  201 bits (512), Expect = 4e-50
 Identities = 96/158 (60%), Positives = 118/158 (74%)
 Frame = -2

Query: 481 RNVNGSMLLVQIYVDDIIFGSTDEKLCKRFAKLMQSKYEMSMMGELNYFLGLQVKQVESG 302
           +  +G + + QIYVDDIIFGST++K C+ F+++M  K+EMSMMGELNYFLG QVKQ++ G
Sbjct: 10  KTCDGDLFVCQIYVDDIIFGSTNQKSCEEFSRVMTQKFEMSMMGELNYFLGFQVKQLKDG 69

Query: 301 IFISQTKYISDLLKKFDLLDCSPAKTPMPTATKLELNTKEMKVDISRYRGMVGSLLYLTA 122
            FISQTKY  DLLK+F + D  PAKTPM T    +LN     VD   YR M+GSLLYL A
Sbjct: 70  TFISQTKYTQDLLKRFGMKDAKPAKTPMGTDGHTDLNKGGKSVDQKAYRSMIGSLLYLCA 129

Query: 121 SRPDIMFATCLCARFQVDPRESHLVAIKQIFRYLKGTP 8
           SRPDIM + C+CARFQ DP+E HLVA+K+I RYL  TP
Sbjct: 130 SRPDIMLSVCMCARFQSDPKECHLVAVKRILRYLVATP 167