BLASTX nr result

ID: Cnidium21_contig00032279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032279
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328049.1| predicted protein [Populus trichocarpa] gi|2...   264   1e-68
ref|XP_002309749.1| predicted protein [Populus trichocarpa] gi|2...   260   2e-67
ref|XP_003541902.1| PREDICTED: zinc finger CCCH domain-containin...   256   5e-66
ref|XP_003540372.1| PREDICTED: zinc finger CCCH domain-containin...   256   5e-66
ref|XP_004136841.1| PREDICTED: zinc finger CCCH domain-containin...   251   1e-64

>ref|XP_002328049.1| predicted protein [Populus trichocarpa] gi|222837458|gb|EEE75837.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  264 bits (675), Expect = 1e-68
 Identities = 139/256 (54%), Positives = 159/256 (62%), Gaps = 30/256 (11%)
 Frame = +2

Query: 56  SEDQRKLHPHQLFV-SRKLRQVDIPPRKXXXXXXXXXXXDMSIYSPRHDDEETLLQKYLP 232
           +E  +   PHQL    R  R ++I P K           DMS Y       ET LQ++LP
Sbjct: 6   AEQHKPYTPHQLLSPKRPFRDLEILPGKLLTKKTHQETLDMSPY-------ETNLQRFLP 58

Query: 233 YNNPQXXXXXXXXV--YSADQFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRKF 406
           YN+          +  YS+D FRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPR+F
Sbjct: 59  YNDYSNEKVLDGELDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRF 118

Query: 407 HYSGIVCQDFRRGECPRGDNCEFAHGVFECWLHPARYRTEACKDGTNCQRKVCFFAHTTR 586
           HYSGIVC +F+RG C RG+NCEF+HGVFECWLHP+RYRTEACKDG NC+RKVCFFAH+ R
Sbjct: 119 HYSGIVCPEFKRGGCSRGENCEFSHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPR 178

Query: 587 QLRILPP------------QDLERVQC--QCQCSVGSPNSTLMRMPDVSPPLSP------ 706
           QLRILP               L    C   C     SP STL+ M  +SPPLSP      
Sbjct: 179 QLRILPEVSSRNKSLASPCSSLNHSHCCVVCHSMTSSPTSTLLGMSHMSPPLSPSLSPPL 238

Query: 707 -------MGGFSPISR 733
                  + GFSPISR
Sbjct: 239 SPVKHQSLSGFSPISR 254


>ref|XP_002309749.1| predicted protein [Populus trichocarpa] gi|222852652|gb|EEE90199.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score =  260 bits (665), Expect = 2e-67
 Identities = 144/260 (55%), Positives = 163/260 (62%), Gaps = 34/260 (13%)
 Frame = +2

Query: 56  SEDQRKLHP-HQLFVSRK--LRQVDIPPRKXXXXXXXXXXXDMSIYSPRHDDEETLLQKY 226
           S +Q KL P HQ+    K  +R ++IPPRK           D+S Y       ET LQ++
Sbjct: 5   SAEQHKLFPSHQILSPHKPLIRDLEIPPRKLLTRKTHQETLDVSPY-------ETDLQEF 57

Query: 227 LPYN--NPQXXXXXXXXVYSADQFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPR 400
           LPYN  N +         YS+D FRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRD R
Sbjct: 58  LPYNDSNNEIDIDDELDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDLR 117

Query: 401 KFHYSGIVCQDFRRGECPRGDNCEFAHGVFECWLHPARYRTEACKDGTNCQRKVCFFAHT 580
           +FHYSG VC +F RG C RGDNCEFAHGVFECWLHP RYRTEACKDG NC+RKVCFFAH+
Sbjct: 118 RFHYSGAVCPEFIRGGCNRGDNCEFAHGVFECWLHPFRYRTEACKDGKNCKRKVCFFAHS 177

Query: 581 TRQLRILPP-----QDLERVQC------QCQCSV-----GSPNSTLMRMPDVSPPLSP-- 706
            RQLRILP      + L    C       C C+V      SP STL+ M  +SPPLSP  
Sbjct: 178 PRQLRILPEGSSHNKTLGSSPCSSLNHGHCCCAVCHSMTSSPTSTLLGMSPLSPPLSPSL 237

Query: 707 -----------MGGFSPISR 733
                      +  FSPISR
Sbjct: 238 TPSLSPVKHQSLSRFSPISR 257


>ref|XP_003541902.1| PREDICTED: zinc finger CCCH domain-containing protein 2-like
           [Glycine max]
          Length = 391

 Score =  256 bits (653), Expect = 5e-66
 Identities = 135/251 (53%), Positives = 158/251 (62%), Gaps = 30/251 (11%)
 Frame = +2

Query: 62  DQRKLHP-HQLFVSRK-LRQVDIPPRKXXXXXXXXXXXDMSIYSPRHDDEETLLQKYLPY 235
           +Q K +P HQL   +K LR++DIPPRK              +YS     EET+ QK+LP 
Sbjct: 7   EQHKFYPSHQLLSPKKTLREIDIPPRKLLTRRAAKCVGGTDVYS-----EETMQQKFLPS 61

Query: 236 NNPQXXXXXXXXVYSADQFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRKFHYS 415
           N+           YS+D FRM+EFKVR+CTRSRSHDWTDCPFAHPGEKARRRDPR++HYS
Sbjct: 62  NDSDEDDP-----YSSDHFRMFEFKVRQCTRSRSHDWTDCPFAHPGEKARRRDPRRYHYS 116

Query: 416 GIVCQDFRRGECPRGDNCEFAHGVFECWLHPARYRTEACKDGTNCQRKVCFFAHTTRQLR 595
           G VC ++RRG C R D CE+AHGVFECWLHP+RYRTEACKDG NC+RKVCFFAHT RQLR
Sbjct: 117 GTVCPEYRRGGCSRDDACEYAHGVFECWLHPSRYRTEACKDGRNCKRKVCFFAHTPRQLR 176

Query: 596 ILP------------PQDLERVQ---------------CQC-QCSVGSPNSTLMRMPDVS 691
           ILP             ++L++V                C C   S  SP STL  M   S
Sbjct: 177 ILPVTSSPSSNDMPCKKNLKQVLNHASKTNNNNNCCLFCHCGASSSASPTSTLFGMSHFS 236

Query: 692 PPLSPMGGFSP 724
           PPLSP    SP
Sbjct: 237 PPLSPSSSSSP 247


>ref|XP_003540372.1| PREDICTED: zinc finger CCCH domain-containing protein 2-like
           [Glycine max]
          Length = 392

 Score =  256 bits (653), Expect = 5e-66
 Identities = 135/253 (53%), Positives = 157/253 (62%), Gaps = 33/253 (13%)
 Frame = +2

Query: 65  QRKLHP-HQLFVSRK-LRQVDIPPRKXXXXXXXXXXXDMSIYSPRHDDEETLLQKYLPYN 238
           Q K +P HQL   +K LR++DIPPRK              +YS     EET+LQK+LP N
Sbjct: 8   QHKFYPSHQLLSPKKTLREIDIPPRKLLTRRAAACVGGTDVYS----SEETMLQKFLPSN 63

Query: 239 NPQXXXXXXXXVYSADQFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRKFHYSG 418
           +           YS+D FRM+EFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPR++HYSG
Sbjct: 64  DSDEDDP-----YSSDHFRMFEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRYHYSG 118

Query: 419 IVCQDFRRGECPRGDNCEFAHGVFECWLHPARYRTEACKDGTNCQRKVCFFAHTTRQLRI 598
            VC ++ RG C RGD CE+AHGVFECWLHP+RYRTEACKDG NC+RKVCFFAHT RQLRI
Sbjct: 119 TVCPEYPRGGCSRGDACEYAHGVFECWLHPSRYRTEACKDGRNCKRKVCFFAHTPRQLRI 178

Query: 599 LP-------------PQDLERVQ-----------------CQCQCSVG-SPNSTLMRMPD 685
           LP              ++L ++                  C C  S   SP STL  M  
Sbjct: 179 LPVTTSSPSSNDMPCKKNLNKLLNHASKSNNNNNNNCCLFCHCGASSSVSPTSTLFGMSH 238

Query: 686 VSPPLSPMGGFSP 724
            SPP+SP    SP
Sbjct: 239 FSPPVSPSSSSSP 251


>ref|XP_004136841.1| PREDICTED: zinc finger CCCH domain-containing protein 2-like
           [Cucumis sativus] gi|449478965|ref|XP_004155466.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           2-like [Cucumis sativus]
          Length = 388

 Score =  251 bits (642), Expect = 1e-64
 Identities = 133/248 (53%), Positives = 153/248 (61%), Gaps = 39/248 (15%)
 Frame = +2

Query: 107 LRQVDIPPRKXXXXXXXXXXXDMSIYSPRHDDE-ETLLQKYLPYNNPQXXXXXXXXVYSA 283
           L  +++PP K           +MS  SPR     E+LLQK+LP+N  +         YS+
Sbjct: 33  LHHINLPPTKNHL--------EMSSDSPRFSYAVESLLQKFLPFNG-EDELEEDGDPYSS 83

Query: 284 DQFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRKFHYSGIVCQDFRRGECPRGD 463
           D FRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPR+FHYSG +C +FRRG C RGD
Sbjct: 84  DHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGD 143

Query: 464 NCEFAHGVFECWLHPARYRTEACKDGTNCQRKVCFFAHTTRQLRILPP-QDLERVQCQ-- 634
            CEFAHGVFECWLHPARYRTEACKDG NC+RKVCFFAH+ R+LR+LPP  + +   C   
Sbjct: 144 GCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNFQTGSCSSP 203

Query: 635 ------------------------CQCS----VGSPNSTLMRMPDVSPPLS-------PM 709
                                   C C       SP STL  M  +SPP S       P+
Sbjct: 204 NNKRSSSSLRSPSTASASNHCCLFCHCGGAAVTSSPTSTLFGMSHLSPPHSPPHSPGKPI 263

Query: 710 GGFSPISR 733
            GFSPISR
Sbjct: 264 NGFSPISR 271


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