BLASTX nr result

ID: Cnidium21_contig00032260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032260
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   108   3e-22
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              108   3e-22
gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata]    107   1e-21
ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   107   1e-21
ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a...   107   1e-21

>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  108 bits (271), Expect = 3e-22
 Identities = 55/78 (70%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
 Frame = -1

Query: 283  QRLEFFGESVLDLLITWYLYQRHNDIDPKELTDLRSASVNNGNFAEEAVRKNL--HLQHS 110
            QRLEF G+SVLD+LITW+LYQ H DIDP ELTDLRSASVNN +FA+ AVR+NL  HLQH 
Sbjct: 1292 QRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHC 1351

Query: 109  PGLLSNQITEFARLVSGS 56
             GLL  QI E+A+ +SGS
Sbjct: 1352 SGLLLGQIKEYAKYLSGS 1369


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  108 bits (271), Expect = 3e-22
 Identities = 55/78 (70%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
 Frame = -1

Query: 283  QRLEFFGESVLDLLITWYLYQRHNDIDPKELTDLRSASVNNGNFAEEAVRKNL--HLQHS 110
            QRLEF G+SVLD+LITW+LYQ H DIDP ELTDLRSASVNN +FA+ AVR+NL  HLQH 
Sbjct: 1302 QRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHC 1361

Query: 109  PGLLSNQITEFARLVSGS 56
             GLL  QI E+A+ +SGS
Sbjct: 1362 SGLLLGQIKEYAKYLSGS 1379


>gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata]
          Length = 596

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
 Frame = -1

Query: 283 QRLEFFGESVLDLLITWYLYQRHNDIDPKELTDLRSASVNNGNFAEEAVRKNL--HLQHS 110
           QRLEF G+SVLD+LITWYLYQ+H DIDP ELTDLRSASVNN NFA  AV++ L  HLQH 
Sbjct: 224 QRLEFLGDSVLDILITWYLYQKHKDIDPGELTDLRSASVNNDNFAYAAVKRELHVHLQHH 283

Query: 109 PGLLSNQITEFARLVSGSYS 50
            G L ++I+ F +LVS S S
Sbjct: 284 SGYLESEISAFVKLVSDSCS 303


>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
            3a-like [Cucumis sativus]
          Length = 1639

 Score =  107 bits (266), Expect = 1e-21
 Identities = 54/78 (69%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
 Frame = -1

Query: 283  QRLEFFGESVLDLLITWYLYQRHNDIDPKELTDLRSASVNNGNFAEEAVRKNL--HLQHS 110
            QRLEF G+SVLDLLITW+ YQ ++DIDP ELTDLRSASVNN NFA+ AVR+NL  HLQH 
Sbjct: 1288 QRLEFLGDSVLDLLITWHYYQNYSDIDPGELTDLRSASVNNENFAQVAVRRNLQQHLQHC 1347

Query: 109  PGLLSNQITEFARLVSGS 56
             GLL +QITE+ + +S S
Sbjct: 1348 SGLLMSQITEYVKYLSES 1365


>ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
          Length = 1359

 Score =  107 bits (266), Expect = 1e-21
 Identities = 54/78 (69%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
 Frame = -1

Query: 283  QRLEFFGESVLDLLITWYLYQRHNDIDPKELTDLRSASVNNGNFAEEAVRKNL--HLQHS 110
            QRLEF G+SVLDLLITW+ YQ ++DIDP ELTDLRSASVNN NFA+ AVR+NL  HLQH 
Sbjct: 1018 QRLEFLGDSVLDLLITWHYYQNYSDIDPGELTDLRSASVNNENFAQVAVRRNLQQHLQHC 1077

Query: 109  PGLLSNQITEFARLVSGS 56
             GLL +QITE+ + +S S
Sbjct: 1078 SGLLMSQITEYVKYLSES 1095


Top