BLASTX nr result

ID: Cnidium21_contig00032215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032215
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278416.2| PREDICTED: transcription elongation factor S...   499   e-139
emb|CBI32841.3| unnamed protein product [Vitis vinifera]              499   e-139
ref|XP_003553378.1| PREDICTED: transcription elongation factor S...   490   e-136
ref|XP_003521098.1| PREDICTED: transcription elongation factor S...   489   e-136
ref|XP_004152869.1| PREDICTED: transcription elongation factor S...   489   e-136

>ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis vinifera]
          Length = 1660

 Score =  499 bits (1286), Expect = e-139
 Identities = 235/307 (76%), Positives = 280/307 (91%), Gaps = 1/307 (0%)
 Frame = -2

Query: 919  VQATIRRVLPQKAICILDSGLVGILAKEDVADNWKELPDLTEKLNEGDILTCKIKSILKN 740
            VQATIR+V  Q+AIC+L+SGL G+LAKED +D+W+++ DL++ ++EGD+LTCKIK+I KN
Sbjct: 1126 VQATIRKVQAQRAICMLESGLTGMLAKEDYSDDWRDISDLSDSMHEGDMLTCKIKTIQKN 1185

Query: 739  RYQLFLSCKESDMKNIQYENHQNLDPYYHEDRSSLSVDQDKVRKQ-ELGRKHFKPRMIVH 563
            R+Q+FL CKES+M++ +Y+N  NLDPYY EDRSSL  +Q+K RK+ EL +KHFKPRMIVH
Sbjct: 1186 RFQVFLVCKESEMRSNRYQNAPNLDPYYREDRSSLQSEQEKARKEKELAKKHFKPRMIVH 1245

Query: 562  PRFQNITADEAVEFLADKDIGESVVRPSSRGPSFLTLTLKVYDGIYAHKDILEGGKEHKD 383
            PRFQNITADEA+EFL+DKD GES++RPSSRGPSFLTLTLKVYDG+YAHKDI+EGGKEHKD
Sbjct: 1246 PRFQNITADEAMEFLSDKDPGESIIRPSSRGPSFLTLTLKVYDGVYAHKDIVEGGKEHKD 1305

Query: 382  IASLLRIGKTLKIGDDTFEDLDEVIDRYVDPLVVQLKVMLNYRKFKKGTKAEVDELLRIE 203
            I SLLRIGKTLKIG+DTFEDLDEV+DRYVDPLV  LK ML+YRKF++GTKAEVDE LRIE
Sbjct: 1306 ITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVTHLKAMLSYRKFRRGTKAEVDEQLRIE 1365

Query: 202  KAENPMRIVYCFGISHEHPGTCILTYIRSSNPHHEYVGVYPTGFKFRRKMFGEVDQLVAY 23
            K+E PMRIVYCFGISHEHPGT ILTYIRSSNPHHEYVG+YP GFKFR++MF ++D+LVAY
Sbjct: 1366 KSEYPMRIVYCFGISHEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRKRMFEDIDRLVAY 1425

Query: 22   FQRHIDD 2
            FQRHIDD
Sbjct: 1426 FQRHIDD 1432


>emb|CBI32841.3| unnamed protein product [Vitis vinifera]
          Length = 1646

 Score =  499 bits (1286), Expect = e-139
 Identities = 235/307 (76%), Positives = 280/307 (91%), Gaps = 1/307 (0%)
 Frame = -2

Query: 919  VQATIRRVLPQKAICILDSGLVGILAKEDVADNWKELPDLTEKLNEGDILTCKIKSILKN 740
            VQATIR+V  Q+AIC+L+SGL G+LAKED +D+W+++ DL++ ++EGD+LTCKIK+I KN
Sbjct: 1112 VQATIRKVQAQRAICMLESGLTGMLAKEDYSDDWRDISDLSDSMHEGDMLTCKIKTIQKN 1171

Query: 739  RYQLFLSCKESDMKNIQYENHQNLDPYYHEDRSSLSVDQDKVRKQ-ELGRKHFKPRMIVH 563
            R+Q+FL CKES+M++ +Y+N  NLDPYY EDRSSL  +Q+K RK+ EL +KHFKPRMIVH
Sbjct: 1172 RFQVFLVCKESEMRSNRYQNAPNLDPYYREDRSSLQSEQEKARKEKELAKKHFKPRMIVH 1231

Query: 562  PRFQNITADEAVEFLADKDIGESVVRPSSRGPSFLTLTLKVYDGIYAHKDILEGGKEHKD 383
            PRFQNITADEA+EFL+DKD GES++RPSSRGPSFLTLTLKVYDG+YAHKDI+EGGKEHKD
Sbjct: 1232 PRFQNITADEAMEFLSDKDPGESIIRPSSRGPSFLTLTLKVYDGVYAHKDIVEGGKEHKD 1291

Query: 382  IASLLRIGKTLKIGDDTFEDLDEVIDRYVDPLVVQLKVMLNYRKFKKGTKAEVDELLRIE 203
            I SLLRIGKTLKIG+DTFEDLDEV+DRYVDPLV  LK ML+YRKF++GTKAEVDE LRIE
Sbjct: 1292 ITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVTHLKAMLSYRKFRRGTKAEVDEQLRIE 1351

Query: 202  KAENPMRIVYCFGISHEHPGTCILTYIRSSNPHHEYVGVYPTGFKFRRKMFGEVDQLVAY 23
            K+E PMRIVYCFGISHEHPGT ILTYIRSSNPHHEYVG+YP GFKFR++MF ++D+LVAY
Sbjct: 1352 KSEYPMRIVYCFGISHEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRKRMFEDIDRLVAY 1411

Query: 22   FQRHIDD 2
            FQRHIDD
Sbjct: 1412 FQRHIDD 1418


>ref|XP_003553378.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
          Length = 1617

 Score =  490 bits (1262), Expect = e-136
 Identities = 229/307 (74%), Positives = 276/307 (89%), Gaps = 1/307 (0%)
 Frame = -2

Query: 919  VQATIRRVLPQKAICILDSGLVGILAKEDVADNWKELPDLTEKLNEGDILTCKIKSILKN 740
            VQ T+RRV  QKAIC L+SG+ GIL KED  D+W+++ +L+++L+EGD+LTCKIKSI KN
Sbjct: 1101 VQVTVRRVQAQKAICGLESGMTGILLKEDYTDDWRDIIELSDRLHEGDMLTCKIKSIQKN 1160

Query: 739  RYQLFLSCKESDMKNIQYENHQNLDPYYHEDRSSLSVDQDKVRKQ-ELGRKHFKPRMIVH 563
            RYQ+FL CK+S+M++ + +N++++DPYYHEDRS    DQDK RK+ EL +KHFKPRMIVH
Sbjct: 1161 RYQVFLVCKDSEMRSNRLQNNRDIDPYYHEDRSCFQSDQDKARKEKELAKKHFKPRMIVH 1220

Query: 562  PRFQNITADEAVEFLADKDIGESVVRPSSRGPSFLTLTLKVYDGIYAHKDILEGGKEHKD 383
            PRFQNITADEA+EFL+DKD GES++RPSSRGPS+LTLTLK+ DG+YAHKDI+EGGKEHKD
Sbjct: 1221 PRFQNITADEAIEFLSDKDPGESIIRPSSRGPSYLTLTLKINDGVYAHKDIVEGGKEHKD 1280

Query: 382  IASLLRIGKTLKIGDDTFEDLDEVIDRYVDPLVVQLKVMLNYRKFKKGTKAEVDELLRIE 203
            I SLLRIGKTLKIG+DTFEDLDEV+DRYVDPLV  LK MLNYRKF+KGTKAEVDELL++E
Sbjct: 1281 ITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLNYRKFRKGTKAEVDELLKME 1340

Query: 202  KAENPMRIVYCFGISHEHPGTCILTYIRSSNPHHEYVGVYPTGFKFRRKMFGEVDQLVAY 23
            KAE PMRIVY FGISHEHPGT ILTYIRS+NPHHEY+G+YP GF+FR+KMF ++D+LVAY
Sbjct: 1341 KAEYPMRIVYSFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAY 1400

Query: 22   FQRHIDD 2
            FQRHIDD
Sbjct: 1401 FQRHIDD 1407


>ref|XP_003521098.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
          Length = 1663

 Score =  489 bits (1260), Expect = e-136
 Identities = 230/307 (74%), Positives = 276/307 (89%), Gaps = 1/307 (0%)
 Frame = -2

Query: 919  VQATIRRVLPQKAICILDSGLVGILAKEDVADNWKELPDLTEKLNEGDILTCKIKSILKN 740
            VQ T+RRV  QKAIC L+SG+ GIL KED  D+W+++ +L+++L+EGD+LTCKIKSI KN
Sbjct: 1132 VQVTVRRVQAQKAICGLESGMTGILLKEDYTDDWRDVIELSDRLHEGDMLTCKIKSIQKN 1191

Query: 739  RYQLFLSCKESDMKNIQYENHQNLDPYYHEDRSSLSVDQDKVRKQ-ELGRKHFKPRMIVH 563
            RYQ+FL CK+S+M++ + +N++++DPYYHEDRS    DQDK RK+ EL +KHFKPRMIVH
Sbjct: 1192 RYQVFLVCKDSEMRSNRLQNNRDIDPYYHEDRSCFQSDQDKARKEKELAKKHFKPRMIVH 1251

Query: 562  PRFQNITADEAVEFLADKDIGESVVRPSSRGPSFLTLTLKVYDGIYAHKDILEGGKEHKD 383
            PRFQNITADEA+EFL+DKD GES++RPSSRGPS+LTLTLK+ DG+YAHKDI+EGGKEHKD
Sbjct: 1252 PRFQNITADEAMEFLSDKDPGESIIRPSSRGPSYLTLTLKINDGVYAHKDIVEGGKEHKD 1311

Query: 382  IASLLRIGKTLKIGDDTFEDLDEVIDRYVDPLVVQLKVMLNYRKFKKGTKAEVDELLRIE 203
            I SLLRIGKTLKIG+DTFEDLDEV+DRYVDPLV  LK MLNYRKF+KGTKAEVDELLR+E
Sbjct: 1312 ITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKSMLNYRKFRKGTKAEVDELLRME 1371

Query: 202  KAENPMRIVYCFGISHEHPGTCILTYIRSSNPHHEYVGVYPTGFKFRRKMFGEVDQLVAY 23
            KAE PMRIVY FGISHEHPGT ILTYIRS+NPHHEY+G+YP GF+FR+KMF ++D+LVAY
Sbjct: 1372 KAEYPMRIVYSFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAY 1431

Query: 22   FQRHIDD 2
            FQRHIDD
Sbjct: 1432 FQRHIDD 1438


>ref|XP_004152869.1| PREDICTED: transcription elongation factor SPT6-like [Cucumis
            sativus]
          Length = 1631

 Score =  489 bits (1258), Expect = e-136
 Identities = 232/307 (75%), Positives = 278/307 (90%), Gaps = 1/307 (0%)
 Frame = -2

Query: 919  VQATIRRVLPQKAICILDSGLVGILAKEDVADNWKELPDLTEKLNEGDILTCKIKSILKN 740
            VQAT+R+VL QKAIC L+SGL G+L KED AD+ +++ DL+++L EGDI+TCKIKSI KN
Sbjct: 1111 VQATVRKVLGQKAICGLESGLTGMLMKEDYADDSRDISDLSDRLREGDIVTCKIKSIQKN 1170

Query: 739  RYQLFLSCKESDMKNIQYENHQNLDPYYHEDRSSLSVDQDKVRKQ-ELGRKHFKPRMIVH 563
            RYQ+FL CKES+M++ +++  QNLDPYYHEDRSSL  +Q+K RK+ EL +KHFKPRMIVH
Sbjct: 1171 RYQVFLVCKESEMRSNRHQITQNLDPYYHEDRSSLQSEQEKSRKEKELAKKHFKPRMIVH 1230

Query: 562  PRFQNITADEAVEFLADKDIGESVVRPSSRGPSFLTLTLKVYDGIYAHKDILEGGKEHKD 383
            PRFQNITADEA+E L+DKD GES+VRPSSRGPSFLTLTLK+YDG+YAHKDI+EGGKEHKD
Sbjct: 1231 PRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKD 1290

Query: 382  IASLLRIGKTLKIGDDTFEDLDEVIDRYVDPLVVQLKVMLNYRKFKKGTKAEVDELLRIE 203
            I SLLRIGKTLKIG+DTFEDLDEV+DRYVDPLV  LK ML+YRKF++GTKAEVDEL++IE
Sbjct: 1291 ITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLSYRKFRRGTKAEVDELMKIE 1350

Query: 202  KAENPMRIVYCFGISHEHPGTCILTYIRSSNPHHEYVGVYPTGFKFRRKMFGEVDQLVAY 23
            K+E PMRI+Y FGISHEHPGT ILTYIRS+NPHHEY+G+YP GFKFR++MF ++D+LVAY
Sbjct: 1351 KSEYPMRIIYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAY 1410

Query: 22   FQRHIDD 2
            FQRHIDD
Sbjct: 1411 FQRHIDD 1417


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