BLASTX nr result

ID: Cnidium21_contig00032208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032208
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631894.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...    97   1e-18
ref|XP_002265926.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...    97   1e-18
emb|CAN69587.1| hypothetical protein VITISV_019797 [Vitis vinifera]    97   1e-18
ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]...    88   8e-16
ref|XP_003548849.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurini...    87   1e-15

>ref|XP_003631894.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like isoform
           2 [Vitis vinifera]
          Length = 596

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/115 (45%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
 Frame = -3

Query: 340 FFQKSSNSIDGISRPGI--SDNPEDVSNSDQFSNGDSMKYDETNTKTDLASQINISIQDH 167
           FFQKSSN  DG+       S +  D S S+Q  N  SM  DE+ +   +   ++ S Q+ 
Sbjct: 449 FFQKSSNVKDGVDNAAADASLDQADESKSNQNPNKTSMGDDESKSSKMVELDVSASNQEQ 508

Query: 166 AAADSLCSTVEEKRIVAVAEWQRIQEVMQNSIPLCKGHSEPCVARIVRKAGPNLG 2
               S  S   +K  +A+ EWQRIQ++MQNSIPLCKGH EPCV+R+ +K GPN G
Sbjct: 509 GVVISGSSPQRDKNDIALVEWQRIQQLMQNSIPLCKGHGEPCVSRLAKKPGPNHG 563


>ref|XP_002265926.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like isoform
           1 [Vitis vinifera]
          Length = 625

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/115 (45%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
 Frame = -3

Query: 340 FFQKSSNSIDGISRPGI--SDNPEDVSNSDQFSNGDSMKYDETNTKTDLASQINISIQDH 167
           FFQKSSN  DG+       S +  D S S+Q  N  SM  DE+ +   +   ++ S Q+ 
Sbjct: 478 FFQKSSNVKDGVDNAAADASLDQADESKSNQNPNKTSMGDDESKSSKMVELDVSASNQEQ 537

Query: 166 AAADSLCSTVEEKRIVAVAEWQRIQEVMQNSIPLCKGHSEPCVARIVRKAGPNLG 2
               S  S   +K  +A+ EWQRIQ++MQNSIPLCKGH EPCV+R+ +K GPN G
Sbjct: 538 GVVISGSSPQRDKNDIALVEWQRIQQLMQNSIPLCKGHGEPCVSRLAKKPGPNHG 592


>emb|CAN69587.1| hypothetical protein VITISV_019797 [Vitis vinifera]
          Length = 632

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/115 (45%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
 Frame = -3

Query: 340 FFQKSSNSIDGISRPGI--SDNPEDVSNSDQFSNGDSMKYDETNTKTDLASQINISIQDH 167
           FFQKSSN  DG+       S +  D S S+Q  N  SM  DE+ +   +   ++ S Q+ 
Sbjct: 485 FFQKSSNVKDGVDNAAADASLDQADESKSNQNPNKTSMGDDESKSSKMVELDVSASNQEQ 544

Query: 166 AAADSLCSTVEEKRIVAVAEWQRIQEVMQNSIPLCKGHSEPCVARIVRKAGPNLG 2
               S  S   +K  +A+ EWQRIQ++MQNSIPLCKGH EPCV+R+ +K GPN G
Sbjct: 545 GVVISGSSPQRDKNDIALVEWQRIQQLMQNSIPLCKGHGEPCVSRLAKKPGPNHG 599


>ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]
           gi|223539047|gb|EEF40643.1| ap endonuclease, putative
           [Ricinus communis]
          Length = 586

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
 Frame = -3

Query: 340 FFQKSSNSIDGISRPG--ISDNPEDVSNSDQFSNGDSMKYDETNTKTDLASQINISIQDH 167
           FFQ++ N+  G       IS + E+VSNS+   +  + + D  NT        +   QD 
Sbjct: 440 FFQRTPNTRSGAENTALDISHSQENVSNSNSPPSETASQDDHNNTPGHCGLNSSSGTQDQ 499

Query: 166 AAADSLCSTVEEKRIVAVAEWQRIQEVMQNSIPLCKGHSEPCVARIVRKAGPNLG 2
              ++  S  +EK  VA+ EWQRIQ++MQNSIPLCKGH EPCV+RIV+K GP  G
Sbjct: 500 DEINNGPSE-KEKNNVALLEWQRIQQLMQNSIPLCKGHKEPCVSRIVKKPGPTCG 553


>ref|XP_003548849.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site)
           lyase 2-like [Glycine max]
          Length = 566

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 7/120 (5%)
 Frame = -3

Query: 340 FFQKSSNSIDGISRPGISDNPEDVSNSDQFSNGDSMKYDETNTKTDLASQ-------INI 182
           FFQKS+N  +G S   ++D+  D SN+    +  S +  ET T    +S         + 
Sbjct: 415 FFQKSANLDNGSSVKVVNDSCTDYSNNQAEPSQPSPRLQETPTVFAHSSSPKKYGLDTDT 474

Query: 181 SIQDHAAADSLCSTVEEKRIVAVAEWQRIQEVMQNSIPLCKGHSEPCVARIVRKAGPNLG 2
             QD A  +   ST EE   VA  EWQRIQ++MQNSIP+CKG+ EPC+AR+V+K GPN G
Sbjct: 475 CDQDLAGPNG-SSTKEEMSNVASLEWQRIQQLMQNSIPICKGYKEPCIARVVKKQGPNFG 533


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