BLASTX nr result

ID: Cnidium21_contig00032205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032205
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516463.1| PREDICTED: protein transport Sec1a-like [Gly...   154   7e-36
ref|XP_002511719.1| plant sec1, putative [Ricinus communis] gi|2...   154   9e-36
ref|XP_003521950.1| PREDICTED: protein transport Sec1a-like [Gly...   149   3e-34
ref|NP_563643.4| protein transport sec1a [Arabidopsis thaliana] ...   146   2e-33
emb|CBI31407.3| unnamed protein product [Vitis vinifera]              145   3e-33

>ref|XP_003516463.1| PREDICTED: protein transport Sec1a-like [Glycine max]
          Length = 946

 Score =  154 bits (389), Expect = 7e-36
 Identities = 73/125 (58%), Positives = 92/125 (73%)
 Frame = +3

Query: 3    KKASRGTFSLKFDSQKSKHAARKDKTGEEEQWQLFRFFPVLEELIEQLTKGSLPKNEYNC 182
            K ++ G FSLKF +QK+K AARKD+T EEE WQLFRF+P+LEELIE L KG LPKNEY+C
Sbjct: 759  KSSAAGGFSLKFSNQKTKQAARKDRTEEEETWQLFRFYPMLEELIENLIKGELPKNEYSC 818

Query: 183  MNQTAPAAQKANTGGVQPVRAGNQSNPHSVRSRRTANWAKPRNSDDGYSSDSVLGNSSND 362
            +N+ +P+  + +    Q  +    + PHS+RSRRTANW + R SDDGYSSDS L N + D
Sbjct: 819  INEPSPSNARGSVRIRQQTQTAPTTAPHSMRSRRTANWGRARTSDDGYSSDSTLKNVTTD 878

Query: 363  FKMMG 377
            FK MG
Sbjct: 879  FKRMG 883


>ref|XP_002511719.1| plant sec1, putative [Ricinus communis] gi|223548899|gb|EEF50388.1|
           plant sec1, putative [Ricinus communis]
          Length = 676

 Score =  154 bits (388), Expect = 9e-36
 Identities = 80/131 (61%), Positives = 98/131 (74%), Gaps = 6/131 (4%)
 Frame = +3

Query: 3   KKASRGTFSLKFDSQKSKHAARKDKTGEEEQWQLFRFFPVLEELIEQLTKGSLPKNEYNC 182
           KKAS G+FSLKF++QK+K AARKD+TGEEE WQLFRF+P+LEELIE + KG LPKNEY+C
Sbjct: 482 KKAS-GSFSLKFNNQKTKTAARKDRTGEEETWQLFRFYPMLEELIENVNKGELPKNEYSC 540

Query: 183 MNQTAPAAQ----KANTGGVQ--PVRAGNQSNPHSVRSRRTANWAKPRNSDDGYSSDSVL 344
           MN+ + A +    K  +G     PV    ++  HS+RSRRTA WA+P  SDDGYSSDSVL
Sbjct: 541 MNEPSSAVEPEETKKGSGRTSNAPVAPERKAPAHSMRSRRTATWARPHLSDDGYSSDSVL 600

Query: 345 GNSSNDFKMMG 377
            N+S D K MG
Sbjct: 601 KNASTDLKKMG 611


>ref|XP_003521950.1| PREDICTED: protein transport Sec1a-like [Glycine max]
          Length = 669

 Score =  149 bits (375), Expect = 3e-34
 Identities = 71/125 (56%), Positives = 91/125 (72%)
 Frame = +3

Query: 3   KKASRGTFSLKFDSQKSKHAARKDKTGEEEQWQLFRFFPVLEELIEQLTKGSLPKNEYNC 182
           K ++ G FSLKF +QK+K AARKD+T EEE WQLFRF+P+LEELIE L+KG L KNEY+C
Sbjct: 482 KSSAAGGFSLKFSNQKTKQAARKDRTEEEETWQLFRFYPMLEELIENLSKGELAKNEYSC 541

Query: 183 MNQTAPAAQKANTGGVQPVRAGNQSNPHSVRSRRTANWAKPRNSDDGYSSDSVLGNSSND 362
           +N+  P+  + +    +  +    + PHS+RSRRTANW + R SDDGYSSDS L N + D
Sbjct: 542 INEPNPSNARGSVRISKQTQTPPTTAPHSMRSRRTANWGRARTSDDGYSSDSTLKNVTTD 601

Query: 363 FKMMG 377
           FK MG
Sbjct: 602 FKRMG 606


>ref|NP_563643.4| protein transport sec1a [Arabidopsis thaliana]
           gi|229470545|sp|Q9C5P7.3|SEC1A_ARATH RecName:
           Full=Protein transport Sec1a; Short=AtSec1a
           gi|332189244|gb|AEE27365.1| protein transport sec1a
           [Arabidopsis thaliana]
          Length = 673

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/130 (55%), Positives = 98/130 (75%), Gaps = 6/130 (4%)
 Frame = +3

Query: 6   KASRGTFSLKFDSQKSKHAARKDKTGEEEQWQLFRFFPVLEELIEQLTKGSLPKNEYNCM 185
           KA  G+FSLKFD+ K+K A RKD++GEEE WQLFRF+P++EEL+E+L KG L K++Y CM
Sbjct: 476 KAKSGSFSLKFDAGKTKQANRKDRSGEEETWQLFRFYPMIEELLEKLVKGDLSKSDYLCM 535

Query: 186 NQTAPAAQ-KANTGGVQPVRA-----GNQSNPHSVRSRRTANWAKPRNSDDGYSSDSVLG 347
           NQ++   + +A TG V+   A       ++ PHS+RSRRTA WA+P +SDDGYSSDSVL 
Sbjct: 536 NQSSHKEESEARTGSVRKSSAPTAVPERKATPHSMRSRRTATWARPHSSDDGYSSDSVLK 595

Query: 348 NSSNDFKMMG 377
           ++S +FK +G
Sbjct: 596 SASTEFKKLG 605


>emb|CBI31407.3| unnamed protein product [Vitis vinifera]
          Length = 736

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/125 (57%), Positives = 91/125 (72%)
 Frame = +3

Query: 3   KKASRGTFSLKFDSQKSKHAARKDKTGEEEQWQLFRFFPVLEELIEQLTKGSLPKNEYNC 182
           KK++ G FSLKF+  K KHAARK++ GEEE WQL RF+P++EELIE+L+KG LPKN+Y C
Sbjct: 553 KKSTIGAFSLKFEVPKRKHAARKERKGEEETWQLSRFYPMIEELIEKLSKGELPKNDYPC 612

Query: 183 MNQTAPAAQKANTGGVQPVRAGNQSNPHSVRSRRTANWAKPRNSDDGYSSDSVLGNSSND 362
           MN   P+A          VR      PHSVR+RR + WA+PR SDDGYSSDS+L ++S+D
Sbjct: 613 MND--PSASFGGPSQAASVRGSQGQAPHSVRARR-STWARPRGSDDGYSSDSILRHASSD 669

Query: 363 FKMMG 377
           FK MG
Sbjct: 670 FKKMG 674


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