BLASTX nr result
ID: Cnidium21_contig00032158
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00032158 (301 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 96 2e-18 emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 96 2e-18 gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 96 2e-18 ref|XP_003622005.1| Heat shock protein [Medicago truncatula] gi|... 94 2e-17 ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789... 92 4e-17 >dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1109 Score = 96.3 bits (238), Expect = 2e-18 Identities = 50/97 (51%), Positives = 65/97 (67%) Frame = -2 Query: 300 AFLHGDLHEEVYMSLPLGYIQDPNGPKLVCKLIKSLYGLKQASRCWFSKLAACLLEADYT 121 AFLHGDL EEVYM LP G+ D P VC+L KSLYGLKQA RCWFSKL++ L + +T Sbjct: 712 AFLHGDLKEEVYMKLPQGFQCDD--PSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFT 769 Query: 120 QSKTDHSMFTYSHDGXXXXXXXXXXXXXISGNNQEAI 10 QS +D+S+F+Y++DG ISG+ +A+ Sbjct: 770 QSLSDYSLFSYNNDGVFVHVLVYVDDLIISGSCPDAV 806 >emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana] gi|7269049|emb|CAB79159.1| LTR retrotransposon like protein [Arabidopsis thaliana] Length = 1109 Score = 96.3 bits (238), Expect = 2e-18 Identities = 50/97 (51%), Positives = 65/97 (67%) Frame = -2 Query: 300 AFLHGDLHEEVYMSLPLGYIQDPNGPKLVCKLIKSLYGLKQASRCWFSKLAACLLEADYT 121 AFLHGDL EEVYM LP G+ D P VC+L KSLYGLKQA RCWFSKL++ L + +T Sbjct: 712 AFLHGDLKEEVYMKLPQGFQCDD--PSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFT 769 Query: 120 QSKTDHSMFTYSHDGXXXXXXXXXXXXXISGNNQEAI 10 QS +D+S+F+Y++DG ISG+ +A+ Sbjct: 770 QSLSDYSLFSYNNDGVFVHVLVYVDDLIISGSCPDAV 806 >gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana] Length = 1468 Score = 96.3 bits (238), Expect = 2e-18 Identities = 50/97 (51%), Positives = 65/97 (67%) Frame = -2 Query: 300 AFLHGDLHEEVYMSLPLGYIQDPNGPKLVCKLIKSLYGLKQASRCWFSKLAACLLEADYT 121 AFLHGDL EEVYM LP G+ D P VC+L KSLYGLKQA RCWFSKL++ L + +T Sbjct: 1071 AFLHGDLKEEVYMKLPQGFQCDD--PSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFT 1128 Query: 120 QSKTDHSMFTYSHDGXXXXXXXXXXXXXISGNNQEAI 10 QS +D+S+F+Y++DG ISG+ +A+ Sbjct: 1129 QSLSDYSLFSYNNDGIFVHVLVYVDDLIISGSCPDAV 1165 >ref|XP_003622005.1| Heat shock protein [Medicago truncatula] gi|355497020|gb|AES78223.1| Heat shock protein [Medicago truncatula] Length = 1120 Score = 93.6 bits (231), Expect = 2e-17 Identities = 51/99 (51%), Positives = 60/99 (60%), Gaps = 2/99 (2%) Frame = -2 Query: 300 AFLHGDLHEEVYMSLPLG--YIQDPNGPKLVCKLIKSLYGLKQASRCWFSKLAACLLEAD 127 AFLHGDLHEEVYMSLP G + D NG VCKL KS+YG KQASR W+SKL+ L+ Sbjct: 636 AFLHGDLHEEVYMSLPPGLKFPHDNNGFTKVCKLHKSIYGRKQASRQWYSKLSESLISLG 695 Query: 126 YTQSKTDHSMFTYSHDGXXXXXXXXXXXXXISGNNQEAI 10 YT S D+S+FT HD ++GNN I Sbjct: 696 YTHSIADYSLFTTQHDVHFTALLVYVDDIVLTGNNYSEI 734 >ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max] Length = 2412 Score = 92.0 bits (227), Expect = 4e-17 Identities = 44/74 (59%), Positives = 52/74 (70%) Frame = -2 Query: 300 AFLHGDLHEEVYMSLPLGYIQDPNGPKLVCKLIKSLYGLKQASRCWFSKLAACLLEADYT 121 AFLHGDL EEVYM LP G++ + VCKL KSLYGLKQASR WFSKL+ L+ Y+ Sbjct: 1288 AFLHGDLDEEVYMDLPPGFLPPGSSSNKVCKLHKSLYGLKQASRQWFSKLSTALISLGYS 1347 Query: 120 QSKTDHSMFTYSHD 79 S DHS+FT H+ Sbjct: 1348 PSSADHSLFTKLHN 1361