BLASTX nr result

ID: Cnidium21_contig00032149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032149
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...    95   1e-25
emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]         90   1e-25
emb|CAE04421.2| OSJNBb0040D15.11 [Oryza sativa Japonica Group]         96   4e-25
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...    96   5e-25
dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis t...    97   6e-25

>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score = 95.1 bits (235), Expect(2) = 1e-25
 Identities = 44/69 (63%), Positives = 53/69 (76%)
 Frame = +2

Query: 182  AIDLAKNPVFHGRSKHIDIRYHFIRECVEKGEIAVKHVATKEQRADTLTKALPVVRFEQM 361
            AI L KNPVFHGRSKHID RYHFIRECVE G+I ++ V+++EQRAD +TK LP  +    
Sbjct: 1354 AIALMKNPVFHGRSKHIDTRYHFIRECVESGQILIEFVSSEEQRADAMTKGLPAAKLATA 1413

Query: 362  RQLLGVQKL 388
            R LLGV+ L
Sbjct: 1414 RHLLGVRDL 1422



 Score = 46.2 bits (108), Expect(2) = 1e-25
 Identities = 23/42 (54%), Positives = 28/42 (66%)
 Frame = +3

Query: 3    MAATAAACQGVWLARVLRQVTDDFQGPVVLFIDNKSAIDLAK 128
            MAATAAAC  +WL  +L ++      PV LF+DNKSAI L K
Sbjct: 1318 MAATAAACHALWLRALLSEMMGTEAKPVKLFVDNKSAIALMK 1359


>emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]
          Length = 1425

 Score = 89.7 bits (221), Expect(2) = 1e-25
 Identities = 41/68 (60%), Positives = 56/68 (82%)
 Frame = +2

Query: 182  AIDLAKNPVFHGRSKHIDIRYHFIRECVEKGEIAVKHVATKEQRADTLTKALPVVRFEQM 361
            AI+L KNPVFH RSKHID RYHFIRECVEK +IAV++V +++Q AD LTK +  VRF+++
Sbjct: 1354 AINLCKNPVFHDRSKHIDTRYHFIRECVEKKQIAVEYVCSEDQLADLLTKPVGRVRFKEL 1413

Query: 362  RQLLGVQK 385
            R+ +G+ +
Sbjct: 1414 RRKMGLDR 1421



 Score = 51.6 bits (122), Expect(2) = 1e-25
 Identities = 23/42 (54%), Positives = 31/42 (73%)
 Frame = +3

Query: 3    MAATAAACQGVWLARVLRQVTDDFQGPVVLFIDNKSAIDLAK 128
            +AAT AACQG+WL+R++ ++ D   G   L IDNKSAI+L K
Sbjct: 1318 IAATTAACQGIWLSRLIAELLDAEPGQTTLMIDNKSAINLCK 1359


>emb|CAE04421.2| OSJNBb0040D15.11 [Oryza sativa Japonica Group]
          Length = 346

 Score = 96.3 bits (238), Expect(2) = 4e-25
 Identities = 46/67 (68%), Positives = 51/67 (76%)
 Frame = +2

Query: 182 AIDLAKNPVFHGRSKHIDIRYHFIRECVEKGEIAVKHVATKEQRADTLTKALPVVRFEQM 361
           AI L KNPVFHGRSKHID RYHFIRECVE G+I ++ V T+EQRAD LTK LP  R    
Sbjct: 276 AIALMKNPVFHGRSKHIDTRYHFIRECVESGKIQIEFVRTEEQRADALTKGLPAARLATA 335

Query: 362 RQLLGVQ 382
           R LLGV+
Sbjct: 336 RHLLGVR 342



 Score = 43.5 bits (101), Expect(2) = 4e-25
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +3

Query: 3   MAATAAACQGVWLARVLRQVTDDFQGPVVLFIDNKSAIDLAK 128
           MAATAAAC  +WL  +L ++      PV L++DNKSAI L K
Sbjct: 240 MAATAAACHALWLRGLLIEMIGAEARPVKLYVDNKSAIALMK 281


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1409

 Score = 95.5 bits (236), Expect(2) = 5e-25
 Identities = 46/69 (66%), Positives = 52/69 (75%)
 Frame = +2

Query: 182  AIDLAKNPVFHGRSKHIDIRYHFIRECVEKGEIAVKHVATKEQRADTLTKALPVVRFEQM 361
            AI L KNPVFHGRSKHID RYHFIRECV+ G+I V+ V T+EQRAD LTK LP  +    
Sbjct: 1336 AIALMKNPVFHGRSKHIDTRYHFIRECVDGGQIVVEFVRTEEQRADALTKGLPAAKLVTA 1395

Query: 362  RQLLGVQKL 388
            R LLGV+ L
Sbjct: 1396 RHLLGVRSL 1404



 Score = 43.9 bits (102), Expect(2) = 5e-25
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +3

Query: 3    MAATAAACQGVWLARVLRQVTDDFQGPVVLFIDNKSAIDLAK 128
            MAAT AACQ +WL  +L +V    +  V LF+DN+SAI L K
Sbjct: 1300 MAATTAACQALWLRLLLAEVAGVEEKAVKLFVDNRSAIALMK 1341


>dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1250

 Score = 97.4 bits (241), Expect(2) = 6e-25
 Identities = 49/78 (62%), Positives = 64/78 (82%)
 Frame = +2

Query: 182  AIDLAKNPVFHGRSKHIDIRYHFIRECVEKGEIAVKHVATKEQRADTLTKALPVVRFEQM 361
            AI LAKNPVFHGRSKHI  RYHFIRECVE  +I V+HV  +EQ+A+ LTKAL  ++F++M
Sbjct: 1156 AIALAKNPVFHGRSKHIHKRYHFIRECVENEQIEVEHVPGEEQKANLLTKALGRIKFKEM 1215

Query: 362  RQLLGVQKLA*KIKFILR 415
            R+L+GVQ+L+ K +F L+
Sbjct: 1216 RELVGVQELS-KCEFKLK 1232



 Score = 41.6 bits (96), Expect(2) = 6e-25
 Identities = 23/42 (54%), Positives = 27/42 (64%)
 Frame = +3

Query: 3    MAATAAACQGVWLARVLRQVTDDFQGPVVLFIDNKSAIDLAK 128
            MAAT  A Q +WL  +L +VT +    V L IDNKSAI LAK
Sbjct: 1120 MAATEGAKQAIWLQELLGEVTGEACKKVRLLIDNKSAIALAK 1161


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