BLASTX nr result

ID: Cnidium21_contig00032139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032139
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like p...   130   1e-28
dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606...   125   4e-27
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   109   2e-22
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...   109   3e-22
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...   106   2e-21

>gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like protein, related
           [Medicago truncatula]
          Length = 196

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/167 (35%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
 Frame = -2

Query: 511 WIVRKIISSREDVLLLN---LQRGNYTIGKGYRILRGDIRKVEWRKMLCSNNAPPKCIFI 341
           W+++K+  + + +  ++    Q+ N++I + Y  LRGD  KV WRKM+C+N APPKC+F+
Sbjct: 9   WVIKKVFGAAKTISSVDGCIFQQANFSIKRMYNALRGDFAKVGWRKMICNNPAPPKCLFV 68

Query: 340 TWLAVMGRLSTSHNLRKIGIECDINCGLCKAHEETIEHLFFECSVAGEIWRSVLEWLGIR 161
           TW                  +CD  C LC    ET  HLFF C  A  +W+ V+ W+ + 
Sbjct: 69  TWYP----------------KCDQVCVLCTKENETHSHLFFSCDYADAVWKGVMRWMNMT 112

Query: 160 RPATGWINEVR-LMGLANTNRRKHLLYRMAVSVTVYMIWKERNSRKF 23
              + W + ++ +    N+N   H  +RM +S T+Y+IWKERN RKF
Sbjct: 113 VNTSNWHSILQYIQSHCNSNNGMHQAHRMVLSETLYVIWKERNDRKF 159


>dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606753|dbj|BAD66776.1|
           orf147a [Beta vulgaris subsp. vulgaris]
          Length = 147

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/128 (48%), Positives = 82/128 (64%)
 Frame = -2

Query: 385 KMLCSNNAPPKCIFITWLAVMGRLSTSHNLRKIGIECDINCGLCKAHEETIEHLFFECSV 206
           +MLC+N +PPKC FITWL ++ RL+T   L+K GI CD  C LC   +ET +HLFF C  
Sbjct: 3   QMLCNNFSPPKCTFITWLTILDRLATCDRLQKFGIVCDQLCVLCGNVDETRDHLFFVCEF 62

Query: 205 AGEIWRSVLEWLGIRRPATGWINEVRLMGLANTNRRKHLLYRMAVSVTVYMIWKERNSRK 26
           + EIW S+L WLGI+R A  W   V       +N     ++RM +S+ VY IW+ERN+RK
Sbjct: 63  SYEIWSSLLCWLGIQRTAGDW-QGVLQSAHCQSNSSASCIFRMCISIAVYFIWRERNARK 121

Query: 25  FSKNVKTK 2
           F + VK K
Sbjct: 122 F-QQVKMK 128


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  109 bits (273), Expect = 2e-22
 Identities = 60/171 (35%), Positives = 94/171 (54%), Gaps = 8/171 (4%)
 Frame = -2

Query: 511  WIVRKIISSREDVLLLNLQRG--------NYTIGKGYRILRGDIRKVEWRKMLCSNNAPP 356
            WI+RKI  SRE   LL    G        N++I K Y++L+ D   V W++++C+N A P
Sbjct: 915  WILRKIFESRE---LLTRTGGWEAVSNHMNFSIKKTYKLLQEDYENVVWKRLICNNKATP 971

Query: 355  KCIFITWLAVMGRLSTSHNLRKIGIECDINCGLCKAHEETIEHLFFECSVAGEIWRSVLE 176
            K  FI WLA++ RL+T+  + +   +    C +C    ETI+HLFF C  + EIW  VL 
Sbjct: 972  KSQFILWLAMLNRLATAERVSRWNRDVSPLCKMCGNEIETIQHLFFNCIYSKEIWGKVLL 1031

Query: 175  WLGIRRPATGWINEVRLMGLANTNRRKHLLYRMAVSVTVYMIWKERNSRKF 23
            +L ++  A     +   +  A + + ++ LY M  + +VY IW  RN++ F
Sbjct: 1032 YLNLQPQADAQAKKELAIKKARSTKDRNKLYVMMFTESVYAIWLLRNAKVF 1082


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
 Frame = -2

Query: 511  WIVRKIISSREDVLLLN------LQRGNYTIGKGYRILRGDIRKVEWRKMLCSNNAPPKC 350
            WI++ I+  R  +  +       L R  + +   Y  L  + ++V WR ++C N A P+ 
Sbjct: 1236 WILKNIMKQRHKLGQIQQHWDQALSRQKFPMSAMYHGLTEEHQRVSWRSVMCGNKARPRA 1295

Query: 349  IFITWLAVMGRLSTSHNLRKIGIECDINCGLCKAHEETIEHLFFECSVAGEIWRSVLEWL 170
            +   WLA   +LST   LR+ G+    +C +C   +E+I HLFF CS   EIW ++L+WL
Sbjct: 1296 VICLWLACHKKLSTKDRLRRFGMIQSSDCSICNCADESINHLFFNCSGTREIWGNILDWL 1355

Query: 169  GIRRPATGWINEVRLMGLANTNRR--KHLLYRMAVSVTVYMIWKERNSRKFSKNV 11
            G R     W  E+  + + NT  +  K  L +MA + TVY +W  RNS  F   V
Sbjct: 1356 GRRHDPREWDMELAWI-IENTKGKGWKSALLKMATAETVYNVWHYRNSMCFGTAV 1409


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
 Frame = -2

Query: 511  WIVRKIISSREDVLLLN------LQRGNYTIGKGYRILRGDIRKVEWRKMLCSNNAPPKC 350
            WI++ I+  R+ +  +       L R  + +   Y  L  + ++V WR ++C N A P+ 
Sbjct: 1119 WILKNIMKQRDKLGQIQQHWDQALSRQKFPMSAMYHGLTEEHQRVSWRSVMCGNKARPRA 1178

Query: 349  IFITWLAVMGRLSTSHNLRKIGIECDINCGLCKAHEETIEHLFFECSVAGEIWRSVLEWL 170
            +   WLA   +LST   LR+  +    +C +C   +E+I HLFF CS   EIW ++L+WL
Sbjct: 1179 VICLWLACHKKLSTKDRLRRFRMIQSSDCSICNCADESINHLFFNCSGTREIWGNILDWL 1238

Query: 169  GIRRPATGWINEVRLMGLANTNRR--KHLLYRMAVSVTVYMIWKERNSRKF 23
            G R     W  E+  + + NT  +  K  L +MA + TVY +W  RNS  F
Sbjct: 1239 GRRHDPREWDMELAWI-IENTKGKGWKSALLKMATAETVYNVWHYRNSMCF 1288


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