BLASTX nr result

ID: Cnidium21_contig00032136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032136
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif...   142   4e-32
ref|XP_002300839.1| f-box family protein [Populus trichocarpa] g...   142   4e-32
emb|CBI28700.3| unnamed protein product [Vitis vinifera]              142   4e-32
emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]   142   4e-32

>ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|222857036|gb|EEE94583.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/107 (67%), Positives = 83/107 (77%)
 Frame = -3

Query: 322 MIERALNLGSVLLEAAKRSARKRDYFHNAVVWPLPADLTIKVFSMLDTQSVCYXXXXXXX 143
           +I+RAL LGS+LLEA  RSARKR  FHN++ W LP DLTIK+FSMLD QS+CY       
Sbjct: 77  LIDRALKLGSLLLEAGNRSARKRSSFHNSLTWALPPDLTIKLFSMLDAQSLCYAAATCSM 136

Query: 142 XXXXXSDPLCYASIDLITVIPKVNNMVVSTMIQRAGKALRSLKLGLM 2
                 DPLCYA+IDL TV+PKVNN VVSTMIQRAGKALRSLKLG++
Sbjct: 137 FYKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKALRSLKLGIV 183


>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
          Length = 486

 Score =  142 bits (357), Expect = 4e-32
 Identities = 71/107 (66%), Positives = 82/107 (76%)
 Frame = -3

Query: 322 MIERALNLGSVLLEAAKRSARKRDYFHNAVVWPLPADLTIKVFSMLDTQSVCYXXXXXXX 143
           +I+RAL LGS LLEA KRSARKR   HN++ W LP DLTIKVFSMLDTQS+CY       
Sbjct: 78  LIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSM 137

Query: 142 XXXXXSDPLCYASIDLITVIPKVNNMVVSTMIQRAGKALRSLKLGLM 2
                 DPLCYA+IDL TV+PKVNN VVSTMIQRAGK L+SL+LG++
Sbjct: 138 FHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGIV 184


>ref|XP_002300839.1| f-box family protein [Populus trichocarpa]
           gi|222842565|gb|EEE80112.1| f-box family protein
           [Populus trichocarpa]
          Length = 471

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/107 (67%), Positives = 82/107 (76%)
 Frame = -3

Query: 322 MIERALNLGSVLLEAAKRSARKRDYFHNAVVWPLPADLTIKVFSMLDTQSVCYXXXXXXX 143
           +I+RAL LGS+LLEA KRSARKR   HN++ W LP DLTIKV SMLDTQS+CY       
Sbjct: 62  LIDRALKLGSLLLEAGKRSARKRSSVHNSLTWALPPDLTIKVLSMLDTQSLCYAAATCSM 121

Query: 142 XXXXXSDPLCYASIDLITVIPKVNNMVVSTMIQRAGKALRSLKLGLM 2
                 DPLCYA+IDL TV+PKVNN VVSTMIQRAGKAL SLKLG++
Sbjct: 122 FYKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKALLSLKLGIV 168


>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  142 bits (357), Expect = 4e-32
 Identities = 71/107 (66%), Positives = 82/107 (76%)
 Frame = -3

Query: 322 MIERALNLGSVLLEAAKRSARKRDYFHNAVVWPLPADLTIKVFSMLDTQSVCYXXXXXXX 143
           +I+RAL LGS LLEA KRSARKR   HN++ W LP DLTIKVFSMLDTQS+CY       
Sbjct: 78  LIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSM 137

Query: 142 XXXXXSDPLCYASIDLITVIPKVNNMVVSTMIQRAGKALRSLKLGLM 2
                 DPLCYA+IDL TV+PKVNN VVSTMIQRAGK L+SL+LG++
Sbjct: 138 FHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGIV 184


>emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]
          Length = 603

 Score =  142 bits (357), Expect = 4e-32
 Identities = 71/107 (66%), Positives = 82/107 (76%)
 Frame = -3

Query: 322 MIERALNLGSVLLEAAKRSARKRDYFHNAVVWPLPADLTIKVFSMLDTQSVCYXXXXXXX 143
           +I+RAL LGS LLEA KRSARKR   HN++ W LP DLTIKVFSMLDTQS+CY       
Sbjct: 78  LIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSM 137

Query: 142 XXXXXSDPLCYASIDLITVIPKVNNMVVSTMIQRAGKALRSLKLGLM 2
                 DPLCYA+IDL TV+PKVNN VVSTMIQRAGK L+SL+LG++
Sbjct: 138 FHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGIV 184


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