BLASTX nr result

ID: Cnidium21_contig00032127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032127
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   170   6e-40
ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   169   8e-40
ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase H...   169   1e-39
emb|CBI15349.3| unnamed protein product [Vitis vinifera]              148   2e-33
ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ...   136   1e-29

>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
            HRQ1-like [Cucumis sativus]
          Length = 1218

 Score =  170 bits (430), Expect = 6e-40
 Identities = 109/316 (34%), Positives = 167/316 (52%), Gaps = 14/316 (4%)
 Frame = -2

Query: 1015 IVVRSLMGXXXXXXXXXXXXIHQLKLLLKQTFPPASSSPNFHLFLKGVKLSLGTPISDYP 836
            I +++L G            I  +KLLL++ FP A  SPNFHLF KG KL   + IS   
Sbjct: 8    ISIKTLSGQSLTVSVSGNSTIDDIKLLLRRNFPSAIISPNFHLFFKGTKLKAQSQISACC 67

Query: 835  TYSGDFFIVIPFTKKDHKQDQKSDEVTTVSNVTTHCSSSNLADSAWSDLMQDLSCM---- 668
               G+F ++IPF KK+  + +  D+    S+V++  S S  ADSAWSD++QDLS +    
Sbjct: 68   IDHGEFLVLIPFNKKESSKSRLRDQYELESSVSSGTSISQFADSAWSDMVQDLSYLHGCS 127

Query: 667  ----QNTYTITNQHDTELQGLTSDDTTGVIRRHLSSGTKWRTKSISSQHEEIANSLVETI 500
                + T   + +  +E+ G+ ++         LSS  K +   +   ++ +  SL + +
Sbjct: 128  VEGREATVPESERGSSEVGGVDAELEASCSTSFLSSKAKGK---VGFGYDGLNGSL-DDV 183

Query: 499  LR----SSSNDVFHVKNWERFLLLSESINCLADPLSGTCMLAK-AILKDG-ETAQYVSKG 338
            LR    S +    + +  E F+   ES++CL DP +G+CMLAK A  + G + A   ++G
Sbjct: 184  LRNFSLSPTEGFLNEQTGESFIKFLESVDCLTDPRNGSCMLAKQANSRSGNKKALNSTRG 243

Query: 337  GLCLCPSWLKDLMKRFCFLNLYSEILEFHGKRVTCSGLQGTLDQLTEFGFQIGISDLEQL 158
              C+CP WLK +MK F FLN++S  L+   + +T S L+   DQL +      + D+  L
Sbjct: 244  SSCICPIWLKKIMKAFSFLNVFSMFLQLQEEIMTVSRLEQATDQLQKRRLMFCMEDIHNL 303

Query: 157  SVLCPKVVHFVDGETE 110
            S LCPK VHF  G  E
Sbjct: 304  SRLCPKAVHFASGRLE 319


>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
            HRQ1-like [Vitis vinifera]
          Length = 1231

 Score =  169 bits (429), Expect = 8e-40
 Identities = 108/297 (36%), Positives = 154/297 (51%), Gaps = 3/297 (1%)
 Frame = -2

Query: 1015 IVVRSLMGXXXXXXXXXXXXIHQLKLLLKQTFPPASSSPNFHLFLKGVKLSLGTPISDYP 836
            I VRSL G            I  LKLLL Q                G KLSL + ++ +P
Sbjct: 8    IEVRSLSGESTTVSISENKTIEDLKLLLNQ----------------GAKLSLQSKLNSHP 51

Query: 835  TYSGDFFIVIPFTKKDHKQDQKSDEVTTVSNVTTHCSSSNLADSAWSDLMQDLSCMQNTY 656
              SG F +++PFTKK  + +Q +    T S V      SN ADSAWSD+MQDL  + N  
Sbjct: 52   IGSGKFMVLVPFTKKVRQCNQSA----TTSEVPNQSPVSNFADSAWSDMMQDLRTLSNMS 107

Query: 655  TITNQHDTELQGLTSDDTTGVIRRHLSSGT--KWRTKSISSQHEEIANSLVETILRSSSN 482
               NQ + +   +       ++    ++ T  + R K    + E  ++ L+ ++L+S   
Sbjct: 108  NNENQTNFDSGSVIEGVRNELMEEASATYTLERKRKKFHGDKQEGSSDDLILSLLKSPCK 167

Query: 481  DVFHVKNWERFLLLSESINCLADPLSGTCMLAKAI-LKDGETAQYVSKGGLCLCPSWLKD 305
                 +N E  + + ES+NCL D  SG+CML + + L  G+  Q  SK  LCLCP+WLK 
Sbjct: 168  IFLDKQNCEILIRVLESVNCLLDMRSGSCMLLREVGLAYGDATQSGSKSSLCLCPAWLKK 227

Query: 304  LMKRFCFLNLYSEILEFHGKRVTCSGLQGTLDQLTEFGFQIGISDLEQLSVLCPKVV 134
            +MK F FLN++S  L+     +T   L+  LD L EFGFQ+ + D+E LSVLCPK+V
Sbjct: 228  IMKTFTFLNIFSAFLQLQQGHITLIHLKEGLDHLGEFGFQVDMEDIEHLSVLCPKLV 284


>ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase HRQ1-like, partial
            [Cucumis sativus]
          Length = 489

 Score =  169 bits (427), Expect = 1e-39
 Identities = 108/316 (34%), Positives = 166/316 (52%), Gaps = 14/316 (4%)
 Frame = -2

Query: 1015 IVVRSLMGXXXXXXXXXXXXIHQLKLLLKQTFPPASSSPNFHLFLKGVKLSLGTPISDYP 836
            I +++L G            I  +KLLL++ FP A  SPNFHLF KG KL   + +S   
Sbjct: 8    ISIKTLSGQSLTVSVSGNSSIDDIKLLLRRNFPSAIISPNFHLFFKGTKLKAQSQLSACC 67

Query: 835  TYSGDFFIVIPFTKKDHKQDQKSDEVTTVSNVTTHCSSSNLADSAWSDLMQDLSCM---- 668
               G+F ++IPF KK+  + +  D+    S+V++  S S  ADSAWSD++QDLS +    
Sbjct: 68   IDHGEFLVLIPFNKKESSKSRLRDQYELESSVSSGTSISQFADSAWSDMVQDLSYLHGCS 127

Query: 667  ----QNTYTITNQHDTELQGLTSDDTTGVIRRHLSSGTKWRTKSISSQHEEIANSLVETI 500
                + T   + +  +E+ G+ ++         LSS  K +   +   ++ +  SL + +
Sbjct: 128  VEGREATVPESERGSSEVGGVDAELEASCSTSFLSSKAKGK---VGFGYDGLNGSL-DDV 183

Query: 499  LR----SSSNDVFHVKNWERFLLLSESINCLADPLSGTCMLAK-AILKDG-ETAQYVSKG 338
            LR    S +    + +  E F+   ES++CL DP +G CMLAK A  + G + A   ++G
Sbjct: 184  LRNFSLSPTEGFLNEQTGESFIKFLESVDCLTDPRNGNCMLAKQANSRSGNKKALNSTRG 243

Query: 337  GLCLCPSWLKDLMKRFCFLNLYSEILEFHGKRVTCSGLQGTLDQLTEFGFQIGISDLEQL 158
              C+CP WLK +MK F FLN++S  L+   + +T S L+   DQL +      + D+  L
Sbjct: 244  SSCICPIWLKKIMKAFSFLNVFSMFLQLQEEIMTVSRLEQATDQLQKRRLMFCMEDIHNL 303

Query: 157  SVLCPKVVHFVDGETE 110
            S LCPK VHF  G  E
Sbjct: 304  SRLCPKAVHFASGRLE 319


>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score =  148 bits (374), Expect = 2e-33
 Identities = 101/297 (34%), Positives = 143/297 (48%), Gaps = 3/297 (1%)
 Frame = -2

Query: 1015 IVVRSLMGXXXXXXXXXXXXIHQLKLLLKQTFPPASSSPNFHLFLKGVKLSLGTPISDYP 836
            I VRSL G            I  LKLLL QTFPPAS+SPNFHLF KG KLSL + ++ +P
Sbjct: 11   IEVRSLSGESTTVSISENKTIEDLKLLLIQTFPPASNSPNFHLFFKGAKLSLQSKLNSHP 70

Query: 835  TYSGDFFIVIPFTKKDHKQDQKSDEVTTVSNVTTHCSSSNLADSAWSDLMQDLSCMQNTY 656
              SG F +++PFTKK  + +Q +    T S V      SN ADSAWSD+MQDL  + N  
Sbjct: 71   IGSGKFMVLVPFTKKVRQCNQSA----TTSEVPNQSPVSNFADSAWSDMMQDLRTLSNMS 126

Query: 655  TITNQHDTELQGLTSDDTTGVIRRHLSSGT--KWRTKSISSQHEEIANSLVETILRSSSN 482
               NQ + +   +       ++    ++ T  + R K    + E  ++ L+ ++L+S   
Sbjct: 127  NNENQTNFDSGSVIEGVRNELMEEASATYTLERKRKKFHGDKQEGSSDDLILSLLKSPCK 186

Query: 481  DVFHVKNWERFLLLSESINCLADPLSGTCMLAKAI-LKDGETAQYVSKGGLCLCPSWLKD 305
                 +N E  + + ES+NCL D  SG+CML + + L  G+  Q                
Sbjct: 187  IFLDKQNCEILIRVLESVNCLLDMRSGSCMLLREVGLAYGDATQ---------------- 230

Query: 304  LMKRFCFLNLYSEILEFHGKRVTCSGLQGTLDQLTEFGFQIGISDLEQLSVLCPKVV 134
                                        G+ + L EFGFQ+ + D+E LSVLCPKV+
Sbjct: 231  ---------------------------SGSKNHLGEFGFQVDMEDIEHLSVLCPKVI 260


>ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 1189

 Score =  136 bits (342), Expect = 1e-29
 Identities = 87/263 (33%), Positives = 136/263 (51%), Gaps = 3/263 (1%)
 Frame = -2

Query: 889 LFLKGVKLSLGTPISDYPTYSGDFFIVIPFTKKDHKQDQKSDEVTTVSNVTTHCSSSNLA 710
           L   GVKLS+ + I+      G+F ++IPF KK+  +    D  T   N+    S+S+ A
Sbjct: 34  LLTTGVKLSVQSHITALTVEPGEFLVLIPFIKKERPKAPNPDFST---NLPKQTSNSSYA 90

Query: 709 DSAWSDLMQDLSCMQNTYTITNQHDTELQGLTSDDTTGVIRRHLSSGTKWRTKSISSQHE 530
           DS +SD+MQ+ S    +++  + + +       D T        S G K R +    ++E
Sbjct: 91  DSVYSDMMQEFS----SFSKESSNLSTPPNYEPDSTN-------SQGHK-RKRVFKYRYE 138

Query: 529 EIAN---SLVETILRSSSNDVFHVKNWERFLLLSESINCLADPLSGTCMLAKAILKDGET 359
           +      + + ++ +SS+ ++    N E+F+ + ES+NCL    SG C+L      +GE 
Sbjct: 139 DDGGGQYAFLWSVFQSSNKNILDDSNCEKFVEVLESLNCLTSSHSGICVLVANSGDNGEA 198

Query: 358 AQYVSKGGLCLCPSWLKDLMKRFCFLNLYSEILEFHGKRVTCSGLQGTLDQLTEFGFQIG 179
                   LCLCP WLK  M+ F FLN+ S  L+ H + +T + L+  L QL  FGF  G
Sbjct: 199 EV------LCLCPEWLKRTMQAFAFLNILSAYLQMHKEEITSAHLKEVLKQLGRFGFNAG 252

Query: 178 ISDLEQLSVLCPKVVHFVDGETE 110
             D+E +S+LCPKVV F +  TE
Sbjct: 253 FEDIEHISILCPKVVSFANNSTE 275


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