BLASTX nr result

ID: Cnidium21_contig00032114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032114
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321288.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_003534671.1| PREDICTED: DNA repair protein RAD5-like [Gly...    58   9e-07
gb|ACU24158.1| unknown [Glycine max]                                   58   9e-07

>ref|XP_002321288.1| predicted protein [Populus trichocarpa] gi|222862061|gb|EEE99603.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
 Frame = +3

Query: 12  GTNVQQEGSMAQ--IIDVEAYDDDVMLSSPREFAEAKAKNVSRRKRRRTILIDLESEGQS 185
           G    Q+G       IDV+ +DDDV+ SSP  FAE  AKN SRR R R +++D+ES G++
Sbjct: 46  GVQASQQGQSLPPPTIDVDVFDDDVIESSPTAFAE--AKNNSRRARGRAVVVDVES-GRT 102

Query: 186 TGVSTYNLLKSRRVLLNQFV-------------QGSSRPVNENAWSMKVTPP 302
           + +S  NL K RRV  NQ +               SSR + EN  ++    P
Sbjct: 103 SRLSHNNLNKRRRVPPNQTIINCDLYINLEGGSSSSSRSMRENVQTLPPKEP 154


>ref|XP_003534671.1| PREDICTED: DNA repair protein RAD5-like [Glycine max]
          Length = 206

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
 Frame = +3

Query: 27  QEGSMAQIIDVEAYDDDVMLSSPREFAEAKAKNVSRRK-RRRTILIDLESEGQSTGVSTY 203
           Q+     I+DV+A DDDV+ SSPR FA+AK+    RR+ RRRT ++DL+SE  + GV   
Sbjct: 49  QQEPQTPIVDVDAIDDDVVESSPRSFAQAKSNADERRRVRRRTTIVDLDSEDGTGGVPQN 108

Query: 204 NLLKSRRVLLNQFVQGSSRPVNENAWSMKVTP 299
             + +  + +N  +  +S   +ENA   K TP
Sbjct: 109 QTIINGDLYVN--LANNSSSASENA---KKTP 135


>gb|ACU24158.1| unknown [Glycine max]
          Length = 206

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
 Frame = +3

Query: 27  QEGSMAQIIDVEAYDDDVMLSSPREFAEAKAKNVSRRK-RRRTILIDLESEGQSTGVSTY 203
           Q+     I+DV+A DDDV+ SSPR FA+AK+    RR+ RRRT ++DL+SE  + GV   
Sbjct: 49  QQEPQTPIVDVDAIDDDVVESSPRSFAQAKSNADERRRVRRRTTIVDLDSEDGTGGVPQN 108

Query: 204 NLLKSRRVLLNQFVQGSSRPVNENAWSMKVTP 299
             + +  + +N  +  +S   +ENA   K TP
Sbjct: 109 QTIINGDLYVN--LTNNSSSASENA---KKTP 135


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