BLASTX nr result

ID: Cnidium21_contig00032108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032108
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27769.3| unnamed protein product [Vitis vinifera]              470   e-130
ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   470   e-130
ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|2...   463   e-128
ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putativ...   455   e-125
ref|XP_002879886.1| hypothetical protein ARALYDRAFT_483128 [Arab...   442   e-121

>emb|CBI27769.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  470 bits (1210), Expect = e-130
 Identities = 236/339 (69%), Positives = 273/339 (80%), Gaps = 1/339 (0%)
 Frame = +1

Query: 1    LDDKKMQINPLCTNVRSLEAGVENASDGPGKLTNSSNGEYNVPAQLIQRYVKVSCGSRLV 180
            LD KKMQ  P   +  S+E  V+  S+   K+ + SNG+Y +PAQL+QRYVKV CGSRLV
Sbjct: 242  LDGKKMQPKPPLEHFGSVEFDVDEDSEKLHKIISPSNGDYKLPAQLVQRYVKVPCGSRLV 301

Query: 181  VLMSILKKLFEGSGTQKIVVFFSTCDAVDFHYLLLSEFQWPPNSVSEAESR-LFLECKTY 357
            VL+SILK LFE   +QKIVVFFSTCDAVDFHY L S F WP N   E E R +FL  KT+
Sbjct: 302  VLLSILKHLFEREASQKIVVFFSTCDAVDFHYSLFSAFLWPANLHPETEDRQMFLRFKTF 361

Query: 358  KLHGNMDHGERRSAFNEFKSEKSALLLSTDVSARGLDFPRVRCIVQYDSPGEATEYVHRV 537
            +LHGNM H +RR+ F  FK EKSALLLSTDV+ARGLDFP+VRCI+QYDSPGEA+EYVHRV
Sbjct: 362  QLHGNMKHEDRRTTFQTFKKEKSALLLSTDVAARGLDFPKVRCIIQYDSPGEASEYVHRV 421

Query: 538  GRTARLGERGDSLLFLQPVEIDYLDELKRHGVLLTEYPLLKLLDSMPFYGRNPNVKKFVS 717
            GRTARLGERGDSLLFLQPVE+DYL +L++HGV LTEY LLK+LDS P  G+  ++KKF+S
Sbjct: 422  GRTARLGERGDSLLFLQPVEMDYLQDLEKHGVSLTEYSLLKVLDSFPLSGQKHHIKKFIS 481

Query: 718  LEMHHWVLSLQKALESFVITEPSVKKLAMSAFCSWVRAYSAHRGELKSIFMVKKLHLGHV 897
            LEMH W L LQKALESF+  EP +KKLA  AFCSWVRAY+AHRGELK IF VKKLHLGHV
Sbjct: 482  LEMHPWSLYLQKALESFIFAEPKMKKLAKDAFCSWVRAYTAHRGELKRIFQVKKLHLGHV 541

Query: 898  AKSFALKEQPSLVGGSFQKQLKKRNRDQKQKGGSKRRRI 1014
            AKSFALK+QPSLVG S Q Q KKR RDQKQ+G SKR+++
Sbjct: 542  AKSFALKDQPSLVGKSMQMQTKKRKRDQKQQGLSKRKKL 580


>ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Vitis
            vinifera]
          Length = 600

 Score =  470 bits (1210), Expect = e-130
 Identities = 236/339 (69%), Positives = 273/339 (80%), Gaps = 1/339 (0%)
 Frame = +1

Query: 1    LDDKKMQINPLCTNVRSLEAGVENASDGPGKLTNSSNGEYNVPAQLIQRYVKVSCGSRLV 180
            LD KKMQ  P   +  S+E  V+  S+   K+ + SNG+Y +PAQL+QRYVKV CGSRLV
Sbjct: 258  LDGKKMQPKPPLEHFGSVEFDVDEDSEKLHKIISPSNGDYKLPAQLVQRYVKVPCGSRLV 317

Query: 181  VLMSILKKLFEGSGTQKIVVFFSTCDAVDFHYLLLSEFQWPPNSVSEAESR-LFLECKTY 357
            VL+SILK LFE   +QKIVVFFSTCDAVDFHY L S F WP N   E E R +FL  KT+
Sbjct: 318  VLLSILKHLFEREASQKIVVFFSTCDAVDFHYSLFSAFLWPANLHPETEDRQMFLRFKTF 377

Query: 358  KLHGNMDHGERRSAFNEFKSEKSALLLSTDVSARGLDFPRVRCIVQYDSPGEATEYVHRV 537
            +LHGNM H +RR+ F  FK EKSALLLSTDV+ARGLDFP+VRCI+QYDSPGEA+EYVHRV
Sbjct: 378  QLHGNMKHEDRRTTFQTFKKEKSALLLSTDVAARGLDFPKVRCIIQYDSPGEASEYVHRV 437

Query: 538  GRTARLGERGDSLLFLQPVEIDYLDELKRHGVLLTEYPLLKLLDSMPFYGRNPNVKKFVS 717
            GRTARLGERGDSLLFLQPVE+DYL +L++HGV LTEY LLK+LDS P  G+  ++KKF+S
Sbjct: 438  GRTARLGERGDSLLFLQPVEMDYLQDLEKHGVSLTEYSLLKVLDSFPLSGQKHHIKKFIS 497

Query: 718  LEMHHWVLSLQKALESFVITEPSVKKLAMSAFCSWVRAYSAHRGELKSIFMVKKLHLGHV 897
            LEMH W L LQKALESF+  EP +KKLA  AFCSWVRAY+AHRGELK IF VKKLHLGHV
Sbjct: 498  LEMHPWSLYLQKALESFIFAEPKMKKLAKDAFCSWVRAYTAHRGELKRIFQVKKLHLGHV 557

Query: 898  AKSFALKEQPSLVGGSFQKQLKKRNRDQKQKGGSKRRRI 1014
            AKSFALK+QPSLVG S Q Q KKR RDQKQ+G SKR+++
Sbjct: 558  AKSFALKDQPSLVGKSMQMQTKKRKRDQKQQGLSKRKKL 596


>ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|222862365|gb|EEE99871.1|
            predicted protein [Populus trichocarpa]
          Length = 594

 Score =  463 bits (1191), Expect = e-128
 Identities = 230/338 (68%), Positives = 276/338 (81%), Gaps = 1/338 (0%)
 Frame = +1

Query: 1    LDDKKMQINPLCTNVRSLEAGVENASDGPGKLTNSSNGEYNVPAQLIQRYVKVSCGSRLV 180
            LDDKK+Q +    ++ + E+  E+   G  K+ NSS G+Y +PAQL+QRYVKV CGSRL 
Sbjct: 251  LDDKKIQPDQSVDHIETAESD-EDDGLGYSKVKNSSTGDYKLPAQLVQRYVKVPCGSRLA 309

Query: 181  VLMSILKKLFEGSGTQKIVVFFSTCDAVDFHYLLLSEFQWPPNSVSEAE-SRLFLECKTY 357
            VL+SILK LFE   + KIVVFFSTCDAVDFHY LLSEF W PNS SEAE +  FL C T 
Sbjct: 310  VLLSILKNLFEREASHKIVVFFSTCDAVDFHYSLLSEFCWSPNSQSEAEHTERFLRCNTL 369

Query: 358  KLHGNMDHGERRSAFNEFKSEKSALLLSTDVSARGLDFPRVRCIVQYDSPGEATEYVHRV 537
            +LHGNM   +RR+ F  FK+EKSALLLSTD++ARGLDFP+VRCIVQYDSPGEATEYVHRV
Sbjct: 370  RLHGNMKQEDRRNTFQAFKTEKSALLLSTDIAARGLDFPKVRCIVQYDSPGEATEYVHRV 429

Query: 538  GRTARLGERGDSLLFLQPVEIDYLDELKRHGVLLTEYPLLKLLDSMPFYGRNPNVKKFVS 717
            GRTARLGE+GDSLLFLQPVE+DYL +L++HGV LTEYP+LK+L S P YG+    +KFVS
Sbjct: 430  GRTARLGEKGDSLLFLQPVEVDYLHDLEKHGVSLTEYPILKVLGSFPLYGQVYRARKFVS 489

Query: 718  LEMHHWVLSLQKALESFVITEPSVKKLAMSAFCSWVRAYSAHRGELKSIFMVKKLHLGHV 897
            L++H WVL LQ+ALESF+++EP + KLA +AFCSWVRAY+AHRG+LK IFMVKKLHLGHV
Sbjct: 490  LDLHPWVLYLQRALESFILSEPRMNKLAQTAFCSWVRAYTAHRGDLKRIFMVKKLHLGHV 549

Query: 898  AKSFALKEQPSLVGGSFQKQLKKRNRDQKQKGGSKRRR 1011
            ++SF LK+QPSLVG SFQ Q KKR R+ KQKG SK+R+
Sbjct: 550  SRSFGLKQQPSLVGQSFQNQSKKRKREGKQKGLSKQRK 587


>ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223533687|gb|EEF35422.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 603

 Score =  455 bits (1170), Expect = e-125
 Identities = 226/339 (66%), Positives = 273/339 (80%), Gaps = 1/339 (0%)
 Frame = +1

Query: 1    LDDKKMQINPLCTNVRSLEAGVENASDGPGKLTNSSNGEYNVPAQLIQRYVKVSCGSRLV 180
            LDD+KMQ  PL  + +SL++  ++  + P K+   S G++ VP QL+Q+YVKV CGSRL 
Sbjct: 261  LDDEKMQPEPLLEHTKSLKSDADDELEHPSKVLKPSTGDFKVPVQLVQKYVKVPCGSRLA 320

Query: 181  VLMSILKKLFEGSGTQKIVVFFSTCDAVDFHYLLLSEFQWPPNSVSEAES-RLFLECKTY 357
             L+SILK LFE   +QKIVVFFSTCDAVDFHY LLSEF++   S SEAE+  +FL CKT+
Sbjct: 321  TLLSILKHLFEKRASQKIVVFFSTCDAVDFHYSLLSEFRFSCTSQSEAEAAEMFLRCKTF 380

Query: 358  KLHGNMDHGERRSAFNEFKSEKSALLLSTDVSARGLDFPRVRCIVQYDSPGEATEYVHRV 537
            +LHGNM   +RR  F  FKS+K ALLLSTDV+ARGLD P+V  I+QYD+PGEATEYVHRV
Sbjct: 381  RLHGNMKQEDRRDTFQAFKSDKLALLLSTDVAARGLDLPKVTWIIQYDTPGEATEYVHRV 440

Query: 538  GRTARLGERGDSLLFLQPVEIDYLDELKRHGVLLTEYPLLKLLDSMPFYGRNPNVKKFVS 717
            GRTAR+GE+GDSLLFLQPVE+DYL EL++HGV LTEYP+LK+LDS  FY +    KKFVS
Sbjct: 441  GRTARMGEKGDSLLFLQPVEVDYLQELQKHGVSLTEYPILKMLDSFSFYEQMHRNKKFVS 500

Query: 718  LEMHHWVLSLQKALESFVITEPSVKKLAMSAFCSWVRAYSAHRGELKSIFMVKKLHLGHV 897
            LE H W+LSLQKALESF+  +P + KLA +AF SWVRAY+AHRGELK IFMV+KLHLGHV
Sbjct: 501  LESHPWLLSLQKALESFIAAQPKMNKLAQNAFLSWVRAYTAHRGELKRIFMVQKLHLGHV 560

Query: 898  AKSFALKEQPSLVGGSFQKQLKKRNRDQKQKGGSKRRRI 1014
            AKSFALK+QPS+VG +FQKQ KKR R+QK KG SKRR+I
Sbjct: 561  AKSFALKQQPSVVGKAFQKQSKKRKREQKPKGLSKRRKI 599


>ref|XP_002879886.1| hypothetical protein ARALYDRAFT_483128 [Arabidopsis lyrata subsp.
            lyrata] gi|297325725|gb|EFH56145.1| hypothetical protein
            ARALYDRAFT_483128 [Arabidopsis lyrata subsp. lyrata]
          Length = 609

 Score =  442 bits (1136), Expect = e-121
 Identities = 216/342 (63%), Positives = 272/342 (79%), Gaps = 4/342 (1%)
 Frame = +1

Query: 1    LDDKKMQINPLCTNVRSLEAGVENASDGPGKLTNSSNGEYNVPAQLIQRYVKVSCGSRLV 180
            LD+ K+Q N    +  S ++  ++      K  N S+ +Y +P+QL+Q+YV+V CG+RLV
Sbjct: 257  LDNSKLQQNLSIESPASPDSDADDMVIHVNKSVNPSSEDYGIPSQLVQKYVRVPCGARLV 316

Query: 181  VLMSILKKLFEGSGTQKIVVFFSTCDAVDFHYLLLSEFQWPPNSVSEAES--RLFLECKT 354
             L+S+LK LFE   +QK+VVFFST DAVDFHY LL+EFQWPPNS +E E+  +LFL+CKT
Sbjct: 317  ALLSVLKNLFEREASQKVVVFFSTRDAVDFHYSLLTEFQWPPNSETEEEATKQLFLKCKT 376

Query: 355  YKLHGNMDHGERRSAFNEFKSEKSALLLSTDVSARGLDFPRVRCIVQYDSPGEATEYVHR 534
            ++LHG+M+  +RRSAF  FK+EK ALLLSTDV+ARGLDFP+VRCI+QYD PGEATEYVHR
Sbjct: 377  FRLHGSMEQEDRRSAFGTFKTEKQALLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHR 436

Query: 535  VGRTARLGERGDSLLFLQPVEIDYLDELKRHGVLLTEYPLLKLLDSMPFYGRNPNVKKFV 714
            VGRTAR+GE+G++LLFLQP+EIDYL ELK+HG  LTEYPLLK+LD  P  G  P +KK +
Sbjct: 437  VGRTARIGEKGEALLFLQPIEIDYLKELKKHGASLTEYPLLKVLDKFPIPGNMPRIKKVI 496

Query: 715  SLEMHHWVLSLQKALESFVITEPSVKKLAMSAFCSWVRAYSAHRGELKSIFMVKKLHLGH 894
            SLE H WV+SLQ+ALESF   EP +K LA +AF SWVR Y+AH+GELKSIF+VKKLHLGH
Sbjct: 497  SLESHPWVISLQRALESFNYAEPKMKSLAKNAFVSWVRGYAAHKGELKSIFVVKKLHLGH 556

Query: 895  VAKSFALKEQPSLVGGSFQKQLKKRNRDQKQKG--GSKRRRI 1014
            VAKSFAL+EQPSLVG S  K+  KR RD++QKG  G KR+++
Sbjct: 557  VAKSFALREQPSLVGKSHHKETMKRKRDERQKGQQGKKRKKM 598


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