BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032107
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD43312.1| putative protein [Arabidopsis thaliana]                62   5e-08
gb|AAL55607.1|AF196776_1 phragmoplastin-interacting protein PHIP...    62   5e-08
ref|NP_191094.1| phragmoplastin interacting protein 1 [Arabidops...    62   5e-08
ref|XP_002876296.1| RNA recognition motif-containing protein [Ar...    61   1e-07
ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    56   3e-06

>dbj|BAD43312.1| putative protein [Arabidopsis thaliana]
          Length = 597

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
 Frame = -3

Query: 251 MVLSNKKLKQKIRAQLTDSFIASSQNTK---QSFKSLLDSLTQKPRLSKRDKRR---VIS 90
           MVLSNKKLKQ+IR  L +S   S   T    QS K LLDS + KPRLSKR+KRR     +
Sbjct: 1   MVLSNKKLKQRIRQDLAESLSVSVSETNPQSQSLKLLLDSSSHKPRLSKREKRRNCETFA 60

Query: 89  SSDAQPENQENGLG-------LDVVKKRKREE 15
             D +    E G G         + KKRKR++
Sbjct: 61  REDDEIRENEVGNGGSSEKTDTKIKKKRKRDD 92


>gb|AAL55607.1|AF196776_1 phragmoplastin-interacting protein PHIP1 [Arabidopsis thaliana]
          Length = 597

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
 Frame = -3

Query: 251 MVLSNKKLKQKIRAQLTDSFIASSQNTK---QSFKSLLDSLTQKPRLSKRDKRR---VIS 90
           MVLSNKKLKQ+IR  L +S   S   T    QS K LLDS + KPRLSKR+KRR     +
Sbjct: 1   MVLSNKKLKQRIRQDLAESLSVSVSETNPQSQSLKLLLDSSSHKPRLSKREKRRNCETFA 60

Query: 89  SSDAQPENQENGLG-------LDVVKKRKREE 15
             D +    E G G         + KKRKR++
Sbjct: 61  REDDEIRENEVGNGGSSEKTDTKIKKKRKRDD 92


>ref|NP_191094.1| phragmoplastin interacting protein 1 [Arabidopsis thaliana]
           gi|7019667|emb|CAB75768.1| putative protein [Arabidopsis
           thaliana] gi|332645849|gb|AEE79370.1| phragmoplastin
           interacting protein 1 [Arabidopsis thaliana]
          Length = 597

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
 Frame = -3

Query: 251 MVLSNKKLKQKIRAQLTDSFIASSQNTK---QSFKSLLDSLTQKPRLSKRDKRR---VIS 90
           MVLSNKKLKQ+IR  L +S   S   T    QS K LLDS + KPRLSKR+KRR     +
Sbjct: 1   MVLSNKKLKQRIRQDLAESLSVSVSETNPQSQSLKLLLDSSSHKPRLSKREKRRNCETFA 60

Query: 89  SSDAQPENQENGLG-------LDVVKKRKREE 15
             D +    E G G         + KKRKR++
Sbjct: 61  REDDEIRENEVGNGGSSEKTDTKIKKKRKRDD 92


>ref|XP_002876296.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297322134|gb|EFH52555.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 599

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 41/92 (44%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
 Frame = -3

Query: 251 MVLSNKKLKQKIRAQLTDSF---IASSQNTKQSFKSLLDSLTQKPRLSKRDKRR---VIS 90
           MVLSNKKLKQ+IR  L  S    +A +    QS K LLDS + KPRLSKR+KRR     +
Sbjct: 1   MVLSNKKLKQRIRQDLVKSLSVSVAETNPQSQSLKLLLDSSSHKPRLSKREKRRNCETFA 60

Query: 89  SSDAQPENQENGLG-------LDVVKKRKREE 15
             D      E G+G         + KKRKR++
Sbjct: 61  REDDGVTENEVGIGGSTEKTDTKIRKKRKRDD 92


>ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 432

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 23/102 (22%)
 Frame = -3

Query: 251 MVLSNKKLKQKIRAQLTDSFIAS---------------SQNTKQSFKSLLDSLT-QKPRL 120
           MVLSNKKLKQK+R +L +S I+S               +++ ++S K LL + +   PRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60

Query: 119 SKRDKRR---VISSSDA----QPENQENGLGLDVVKKRKREE 15
           SKR+KRR   V++ SD     + E++  GLG    KKRKR E
Sbjct: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLG---EKKRKRNE 99