BLASTX nr result

ID: Cnidium21_contig00032101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032101
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...   108   7e-22
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]   105   6e-21
dbj|BAF00783.1| hypothetical protein [Arabidopsis thaliana]           105   6e-21
dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...   105   7e-21
ref|XP_002280329.2| PREDICTED: cucumisin-like [Vitis vinifera]        104   1e-20

>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  108 bits (270), Expect = 7e-22
 Identities = 53/123 (43%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
 Frame = -1

Query: 367 ATTGNTISSQIDVIHS-YFLSSSDNPGMSLIKVLLNEHNYSQWSRSMEIALFSKLKLDFV 191
           A  G+++    D +HS  FL ++D+PG+S++ V L+  NY+QWS +M+IAL +K K+ F+
Sbjct: 37  APFGSSVLMNPDSVHSPLFLHNADHPGISIVSVQLDGANYNQWSSAMKIALDAKNKIAFI 96

Query: 190 DGSNLKPIPGSPLLPYWNQCNHMIISWLLNSVSADIRNNIVYMDSALSIWKELVIRYAQS 11
           DGS  +P  G+ LL  W++CN M+ SW+LNSV+ +I  +I+  D A  IW +L  R+  +
Sbjct: 97  DGSCPRPEEGNHLLRIWSRCNSMVKSWILNSVNREIYGSILSFDDAAQIWNDLHNRFHMT 156

Query: 10  NLP 2
           NLP
Sbjct: 157 NLP 159


>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score =  105 bits (262), Expect = 6e-21
 Identities = 55/124 (44%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
 Frame = -1

Query: 367 ATTG--NTISSQIDVIHSYFLSSSDNPGMSLIKVLLNEHNYSQWSRSMEIALFSKLKLDF 194
           ATT   N++SS  D    YFL + D+PG+ L+   L   NY+ WSR+M +AL +K K+ F
Sbjct: 10  ATTSVPNSLSSMEDSTSPYFLHNLDHPGIVLVSHHLTGANYNTWSRAMVMALTAKNKISF 69

Query: 193 VDGSNLKPIPGSPLLPYWNQCNHMIISWLLNSVSADIRNNIVYMDSALSIWKELVIRYAQ 14
           +DGS   P     L   W +CN M+ISW+LNSV  DI ++++Y D+A+ IW +L  R+ Q
Sbjct: 70  IDGSIPCPESDDLLFGTWIRCNSMVISWILNSVHKDIADSLLYFDTAVGIWNDLRDRFCQ 129

Query: 13  SNLP 2
           SN P
Sbjct: 130 SNGP 133


>dbj|BAF00783.1| hypothetical protein [Arabidopsis thaliana]
          Length = 556

 Score =  105 bits (262), Expect = 6e-21
 Identities = 53/121 (43%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
 Frame = -1

Query: 361 TGNTISSQIDVIHS-YFLSSSDNPGMSLIKVLLNEHNYSQWSRSMEIALFSKLKLDFVDG 185
           T N ++   D IHS Y+L++SDNPG S+   + +  NY  W  S++IAL +K KL F+DG
Sbjct: 2   TRNPVTESHDSIHSPYYLTNSDNPGASITSEVFDGTNYDDWKISIKIALDAKNKLVFIDG 61

Query: 184 SNLKPIPGSPLLPYWNQCNHMIISWLLNSVSADIRNNIVYMDSALSIWKELVIRYAQSNL 5
           S  +P    P+   W++CN ++ SWLLNSVS  I  +I+  D A  IW +L  RY  +NL
Sbjct: 62  SVPRPPESDPMFRIWSRCNSLVKSWLLNSVSKPIYKSILRFDDASEIWNDLSTRYHITNL 121

Query: 4   P 2
           P
Sbjct: 122 P 122


>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score =  105 bits (261), Expect = 7e-21
 Identities = 49/126 (38%), Positives = 77/126 (61%)
 Frame = -1

Query: 391 NNTGSYSGATTGNTISSQIDVIHSYFLSSSDNPGMSLIKVLLNEHNYSQWSRSMEIALFS 212
           + TGS SG+   N+    +D+ H Y+L+SSD PGM+LI    +  +Y  W R + I+L +
Sbjct: 13  SGTGSSSGSRDENSPLKVLDINHPYYLASSDAPGMNLINTSFDGSSYGNWKRGVLISLSA 72

Query: 211 KLKLDFVDGSNLKPIPGSPLLPYWNQCNHMIISWLLNSVSADIRNNIVYMDSALSIWKEL 32
           K KL F+ G+  KP     L   W +C+ M+++WLLNS+S +I  +++Y  +A  +W+EL
Sbjct: 73  KNKLGFITGAYKKPDKEDLLFEQWRRCSDMVLAWLLNSLSKEIAESVLYSQTAQELWQEL 132

Query: 31  VIRYAQ 14
             RY Q
Sbjct: 133 EQRYGQ 138


>ref|XP_002280329.2| PREDICTED: cucumisin-like [Vitis vinifera]
          Length = 834

 Score =  104 bits (259), Expect = 1e-20
 Identities = 50/130 (38%), Positives = 81/130 (62%), Gaps = 4/130 (3%)
 Frame = -1

Query: 382 GSYSGATTGNTISSQIDVIH----SYFLSSSDNPGMSLIKVLLNEHNYSQWSRSMEIALF 215
           G       G  ++S+I V+     +YFL + D+PG++L+  LL   NY  W R+M +AL 
Sbjct: 4   GGSGNGNRGGQVNSEIVVVEDSSSTYFLHNGDHPGLNLVSNLLTGANYHTWRRAMLMALT 63

Query: 214 SKLKLDFVDGSNLKPIPGSPLLPYWNQCNHMIISWLLNSVSADIRNNIVYMDSALSIWKE 35
           +K K+ FVDG+  +P+    +   WN+CN MI SW++N+VS +I ++++Y+DSA  IWK+
Sbjct: 64  AKNKVGFVDGTISRPMSHDLIYGAWNRCNSMISSWIINAVSREIADSLLYLDSACDIWKD 123

Query: 34  LVIRYAQSNL 5
           L  R+ Q  +
Sbjct: 124 LNDRFNQGQV 133


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