BLASTX nr result

ID: Cnidium21_contig00032100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032100
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vin...    67   2e-09
ref|XP_002516301.1| Histone deacetylase, putative [Ricinus commu...    62   6e-08
gb|AAX92703.1| histone deacetylase [Picea abies]                       59   3e-07
gb|AFK45229.1| unknown [Lotus japonicus]                               56   4e-06
ref|NP_567921.1| histone deacetylase 14 [Arabidopsis thaliana] g...    55   8e-06

>ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vinifera]
           gi|296088531|emb|CBI37522.3| unnamed protein product
           [Vitis vinifera]
          Length = 437

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/104 (39%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
 Frame = -3

Query: 298 PSLTGSMLFQAQCRVCIWKKCHLFGSDAGIGCLQKLSWXXXXXXXXXXXXXXXXYGEGVD 119
           PS TGS++   Q  VC  K    FGSD       K S                    G  
Sbjct: 9   PSFTGSLVLLVQHNVCKLKNHGRFGSDT------KFSGDGYFRKHLKSGRRYFSKSRG-- 60

Query: 118 PFV-----PSSTQVFDGKIIYCVAPAMGHNKDSHPECHLRVPSI 2
           PFV     PS++++ D ++IYCVAPAMGHN++SHPE + RVP+I
Sbjct: 61  PFVSCSLVPSTSELSDARVIYCVAPAMGHNQESHPESNFRVPAI 104


>ref|XP_002516301.1| Histone deacetylase, putative [Ricinus communis]
           gi|223544531|gb|EEF46048.1| Histone deacetylase,
           putative [Ricinus communis]
          Length = 425

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = -3

Query: 121 DPFVPSSTQVFDGKIIYCVAPAMGHNKDSHPECHLRVPSI 2
           DP +PS  Q+ D +IIY VAPAMGHN++SHPE HLRVP+I
Sbjct: 53  DPNLPSIQQLTDARIIYSVAPAMGHNQESHPESHLRVPAI 92


>gb|AAX92703.1| histone deacetylase [Picea abies]
          Length = 198

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 22/37 (59%), Positives = 32/37 (86%)
 Frame = -3

Query: 112 VPSSTQVFDGKIIYCVAPAMGHNKDSHPECHLRVPSI 2
           VP ++++ D ++IYC APAMGHN++SHPEC+ RVP+I
Sbjct: 25  VPQASELADARVIYCAAPAMGHNQESHPECNARVPAI 61


>gb|AFK45229.1| unknown [Lotus japonicus]
          Length = 413

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/37 (62%), Positives = 30/37 (81%)
 Frame = -3

Query: 112 VPSSTQVFDGKIIYCVAPAMGHNKDSHPECHLRVPSI 2
           +PS  Q+ D ++IY VAP+MGHN++SHPE H RVPSI
Sbjct: 44  LPSIEQLSDARVIYSVAPSMGHNQESHPESHFRVPSI 80


>ref|NP_567921.1| histone deacetylase 14 [Arabidopsis thaliana]
           gi|75249520|sp|Q941D6.1|HDA14_ARATH RecName:
           Full=Histone deacetylase 14 gi|15529220|gb|AAK97704.1|
           AT4g33470/F17M5_230 [Arabidopsis thaliana]
           gi|21360523|gb|AAM47377.1| AT4g33470/F17M5_230
           [Arabidopsis thaliana] gi|332660831|gb|AEE86231.1|
           histone deacetylase 14 [Arabidopsis thaliana]
          Length = 423

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/40 (55%), Positives = 31/40 (77%)
 Frame = -3

Query: 121 DPFVPSSTQVFDGKIIYCVAPAMGHNKDSHPECHLRVPSI 2
           +P +PS  Q+ D ++IY V+ A+GHNK+SHPEC  RVP+I
Sbjct: 51  NPLLPSIQQLADARLIYSVSAALGHNKESHPECSARVPAI 90


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