BLASTX nr result
ID: Cnidium21_contig00032100
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00032100 (348 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vin... 67 2e-09 ref|XP_002516301.1| Histone deacetylase, putative [Ricinus commu... 62 6e-08 gb|AAX92703.1| histone deacetylase [Picea abies] 59 3e-07 gb|AFK45229.1| unknown [Lotus japonicus] 56 4e-06 ref|NP_567921.1| histone deacetylase 14 [Arabidopsis thaliana] g... 55 8e-06 >ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vinifera] gi|296088531|emb|CBI37522.3| unnamed protein product [Vitis vinifera] Length = 437 Score = 66.6 bits (161), Expect = 2e-09 Identities = 41/104 (39%), Positives = 53/104 (50%), Gaps = 5/104 (4%) Frame = -3 Query: 298 PSLTGSMLFQAQCRVCIWKKCHLFGSDAGIGCLQKLSWXXXXXXXXXXXXXXXXYGEGVD 119 PS TGS++ Q VC K FGSD K S G Sbjct: 9 PSFTGSLVLLVQHNVCKLKNHGRFGSDT------KFSGDGYFRKHLKSGRRYFSKSRG-- 60 Query: 118 PFV-----PSSTQVFDGKIIYCVAPAMGHNKDSHPECHLRVPSI 2 PFV PS++++ D ++IYCVAPAMGHN++SHPE + RVP+I Sbjct: 61 PFVSCSLVPSTSELSDARVIYCVAPAMGHNQESHPESNFRVPAI 104 >ref|XP_002516301.1| Histone deacetylase, putative [Ricinus communis] gi|223544531|gb|EEF46048.1| Histone deacetylase, putative [Ricinus communis] Length = 425 Score = 61.6 bits (148), Expect = 6e-08 Identities = 27/40 (67%), Positives = 33/40 (82%) Frame = -3 Query: 121 DPFVPSSTQVFDGKIIYCVAPAMGHNKDSHPECHLRVPSI 2 DP +PS Q+ D +IIY VAPAMGHN++SHPE HLRVP+I Sbjct: 53 DPNLPSIQQLTDARIIYSVAPAMGHNQESHPESHLRVPAI 92 >gb|AAX92703.1| histone deacetylase [Picea abies] Length = 198 Score = 59.3 bits (142), Expect = 3e-07 Identities = 22/37 (59%), Positives = 32/37 (86%) Frame = -3 Query: 112 VPSSTQVFDGKIIYCVAPAMGHNKDSHPECHLRVPSI 2 VP ++++ D ++IYC APAMGHN++SHPEC+ RVP+I Sbjct: 25 VPQASELADARVIYCAAPAMGHNQESHPECNARVPAI 61 >gb|AFK45229.1| unknown [Lotus japonicus] Length = 413 Score = 55.8 bits (133), Expect = 4e-06 Identities = 23/37 (62%), Positives = 30/37 (81%) Frame = -3 Query: 112 VPSSTQVFDGKIIYCVAPAMGHNKDSHPECHLRVPSI 2 +PS Q+ D ++IY VAP+MGHN++SHPE H RVPSI Sbjct: 44 LPSIEQLSDARVIYSVAPSMGHNQESHPESHFRVPSI 80 >ref|NP_567921.1| histone deacetylase 14 [Arabidopsis thaliana] gi|75249520|sp|Q941D6.1|HDA14_ARATH RecName: Full=Histone deacetylase 14 gi|15529220|gb|AAK97704.1| AT4g33470/F17M5_230 [Arabidopsis thaliana] gi|21360523|gb|AAM47377.1| AT4g33470/F17M5_230 [Arabidopsis thaliana] gi|332660831|gb|AEE86231.1| histone deacetylase 14 [Arabidopsis thaliana] Length = 423 Score = 54.7 bits (130), Expect = 8e-06 Identities = 22/40 (55%), Positives = 31/40 (77%) Frame = -3 Query: 121 DPFVPSSTQVFDGKIIYCVAPAMGHNKDSHPECHLRVPSI 2 +P +PS Q+ D ++IY V+ A+GHNK+SHPEC RVP+I Sbjct: 51 NPLLPSIQQLADARLIYSVSAALGHNKESHPECSARVPAI 90