BLASTX nr result

ID: Cnidium21_contig00032097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032097
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   123   2e-26
gb|ABF81452.1| TIR-NBS type disease resistance protein [Populus ...   108   4e-22
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic...   107   1e-21
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...   106   2e-21
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        103   1e-20

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/67 (88%), Positives = 64/67 (95%)
 Frame = +1

Query: 22   GFTQKEGVDYNEIFSPVVRHASIRVLLAIIAHRDLELEQLDVKTAFLHGELEEEIYVTQP 201
            GF Q+EGVDYNEIFSPVVRH SIRVLLAI+AH++LELEQLDVKTAFLHGELEEEIY+TQP
Sbjct: 863  GFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQP 922

Query: 202  DGFQVLG 222
            DGFQV G
Sbjct: 923  DGFQVPG 929


>gb|ABF81452.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1309

 Score =  108 bits (270), Expect = 4e-22
 Identities = 48/64 (75%), Positives = 60/64 (93%)
 Frame = +1

Query: 22  GFTQKEGVDYNEIFSPVVRHASIRVLLAIIAHRDLELEQLDVKTAFLHGELEEEIYVTQP 201
           G+ QKEG+DYNE+FSPVV+H+SIR+LLA++A  DLEL QLDVKTAFLHG+LEEEIY++QP
Sbjct: 136 GYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGDLEEEIYMSQP 195

Query: 202 DGFQ 213
           DGF+
Sbjct: 196 DGFK 199


>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
          Length = 624

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/63 (82%), Positives = 56/63 (88%)
 Frame = +1

Query: 22  GFTQKEGVDYNEIFSPVVRHASIRVLLAIIAHRDLELEQLDVKTAFLHGELEEEIYVTQP 201
           GF QKEG+D+NEIFSPVVRH SIRVLLA +A  DLELEQLDVKTAFLHGELEEEIY+ Q 
Sbjct: 237 GFNQKEGIDFNEIFSPVVRHTSIRVLLAFVALFDLELEQLDVKTAFLHGELEEEIYMEQS 296

Query: 202 DGF 210
           DGF
Sbjct: 297 DGF 299


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/65 (72%), Positives = 59/65 (90%)
 Frame = +1

Query: 22   GFTQKEGVDYNEIFSPVVRHASIRVLLAIIAHRDLELEQLDVKTAFLHGELEEEIYVTQP 201
            GFTQKEGVDYNEIFSPVV+H SIR LL+++ H ++EL+Q+DVKTAFLHG LEEEIY+ QP
Sbjct: 888  GFTQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQP 947

Query: 202  DGFQV 216
            +GF++
Sbjct: 948  EGFEI 952


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/64 (73%), Positives = 59/64 (92%)
 Frame = +1

Query: 22   GFTQKEGVDYNEIFSPVVRHASIRVLLAIIAHRDLELEQLDVKTAFLHGELEEEIYVTQP 201
            GFTQ+EGVD+NEIFSPVV+H+SIR+LLA++A  DLELEQ+DVKTAFLHG LEE+I + QP
Sbjct: 886  GFTQREGVDFNEIFSPVVKHSSIRILLAMVALLDLELEQMDVKTAFLHGNLEEQILMAQP 945

Query: 202  DGFQ 213
            +GF+
Sbjct: 946  EGFE 949


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