BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032088
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325965.1| predicted protein [Populus trichocarpa] gi|2...   347   1e-93
ref|NP_567345.2| DNA mismatch repair protein MLH1 [Arabidopsis t...   334   1e-89
gb|AAK25988.1|AF360278_1 putative MLH1 protein [Arabidopsis thal...   334   1e-89
ref|XP_002874562.1| hypothetical protein ARALYDRAFT_911184 [Arab...   333   2e-89
ref|XP_004168484.1| PREDICTED: DNA mismatch repair protein Mlh1-...   332   8e-89

>ref|XP_002325965.1| predicted protein [Populus trichocarpa] gi|222862840|gb|EEF00347.1|
            predicted protein [Populus trichocarpa]
          Length = 747

 Score =  347 bits (891), Expect = 1e-93
 Identities = 177/252 (70%), Positives = 201/252 (79%), Gaps = 2/252 (0%)
 Frame = -3

Query: 849  ALLQHNTHLYLANVVNLSKELMYQQVLRRFAHFNAIQLSDXXXXXXXXXXXLXXXXXXXX 670
            ALLQ+ T LYLANVVNLSKELMYQQVLRRFAHFN IQLSD           L        
Sbjct: 497  ALLQYKTQLYLANVVNLSKELMYQQVLRRFAHFNVIQLSDPAPLRLLIMLALKEEDLDLE 556

Query: 669  XXXXXXXK-KIAEMNTDLLKQKSELLDEYFCIHVDAEGNLGRLPVILDQYTPEMDRVPEF 493
                   + KIAEMNT+LLK K+ELL+EYFCI++D+ GNL RLPVILDQYTP+MDR+PEF
Sbjct: 557  SNENEDLREKIAEMNTELLKDKAELLEEYFCIYIDSHGNLSRLPVILDQYTPDMDRIPEF 616

Query: 492  VLCLGNDVEWDDEKKCFQTIAAALGNFYAMHPPLLPNPSGEGLQFYKR-KPSSNSGEPDA 316
            VL LGNDV+W+DEK CFQTIAAA+GNFYA+HPPLLP+PSG+GLQFY+R KP  N  + + 
Sbjct: 617  VLSLGNDVDWEDEKNCFQTIAAAVGNFYAIHPPLLPSPSGDGLQFYRRRKPEKNPDDKEK 676

Query: 315  TTFGDSGEMGDDIEHELLSEAENAWAQREWTIQHVLFPSMKLFFNPPTSMATNGTFVQVA 136
             T  D  EM D++EHELLSEAE AWAQREW+IQHVLFPSM+LF  PPTSMATNGTFVQVA
Sbjct: 677  ATDIDV-EMEDELEHELLSEAETAWAQREWSIQHVLFPSMRLFLKPPTSMATNGTFVQVA 735

Query: 135  SLEKLFKIFERC 100
            SLEKL+KIFERC
Sbjct: 736  SLEKLYKIFERC 747


>ref|NP_567345.2| DNA mismatch repair protein MLH1 [Arabidopsis thaliana]
            gi|3893081|emb|CAA10163.1| MLH1 protein [Arabidopsis
            thaliana] gi|7267557|emb|CAB78038.1| MLH1 protein
            [Arabidopsis thaliana] gi|332657326|gb|AEE82726.1| DNA
            mismatch repair protein MLH1 [Arabidopsis thaliana]
          Length = 737

 Score =  334 bits (857), Expect = 1e-89
 Identities = 164/251 (65%), Positives = 199/251 (79%), Gaps = 1/251 (0%)
 Frame = -3

Query: 849  ALLQHNTHLYLANVVNLSKELMYQQVLRRFAHFNAIQLSDXXXXXXXXXXXLXXXXXXXX 670
            AL+Q+NTHLYLANVVNLSKELMYQQ LRRFAHFNAIQLSD           L        
Sbjct: 490  ALVQYNTHLYLANVVNLSKELMYQQTLRRFAHFNAIQLSDPAPLSELILLALKEEDLDPG 549

Query: 669  XXXXXXXK-KIAEMNTDLLKQKSELLDEYFCIHVDAEGNLGRLPVILDQYTPEMDRVPEF 493
                   K +IAEMNT+LLK+K+E+L+EYF +H+D+  NL RLPVILDQYTP+MDRVPEF
Sbjct: 550  NDTKDDLKERIAEMNTELLKEKAEMLEEYFSVHIDSSANLSRLPVILDQYTPDMDRVPEF 609

Query: 492  VLCLGNDVEWDDEKKCFQTIAAALGNFYAMHPPLLPNPSGEGLQFYKRKPSSNSGEPDAT 313
            +LCLGNDVEW+DEK CFQ ++AA+GNFYAMHPPLLPNPSG+G+QFY ++  S+  + D  
Sbjct: 610  LLCLGNDVEWEDEKSCFQGVSAAIGNFYAMHPPLLPNPSGDGIQFYSKRGESSQEKSD-- 667

Query: 312  TFGDSGEMGDDIEHELLSEAENAWAQREWTIQHVLFPSMKLFFNPPTSMATNGTFVQVAS 133
                + +M D+++ +LLS+AENAWAQREW+IQHVLFPSM+LF  PP SMA+NGTFV+VAS
Sbjct: 668  -LEGNVDMEDNLDQDLLSDAENAWAQREWSIQHVLFPSMRLFLKPPASMASNGTFVKVAS 726

Query: 132  LEKLFKIFERC 100
            LEKL+KIFERC
Sbjct: 727  LEKLYKIFERC 737


>gb|AAK25988.1|AF360278_1 putative MLH1 protein [Arabidopsis thaliana]
          Length = 727

 Score =  334 bits (857), Expect = 1e-89
 Identities = 164/251 (65%), Positives = 199/251 (79%), Gaps = 1/251 (0%)
 Frame = -3

Query: 849  ALLQHNTHLYLANVVNLSKELMYQQVLRRFAHFNAIQLSDXXXXXXXXXXXLXXXXXXXX 670
            AL+Q+NTHLYLANVVNLSKELMYQQ LRRFAHFNAIQLSD           L        
Sbjct: 480  ALVQYNTHLYLANVVNLSKELMYQQTLRRFAHFNAIQLSDPAPLSELILLALKEEDLDPG 539

Query: 669  XXXXXXXK-KIAEMNTDLLKQKSELLDEYFCIHVDAEGNLGRLPVILDQYTPEMDRVPEF 493
                   K +IAEMNT+LLK+K+E+L+EYF +H+D+  NL RLPVILDQYTP+MDRVPEF
Sbjct: 540  NDTKDDLKERIAEMNTELLKEKAEMLEEYFSVHIDSSANLSRLPVILDQYTPDMDRVPEF 599

Query: 492  VLCLGNDVEWDDEKKCFQTIAAALGNFYAMHPPLLPNPSGEGLQFYKRKPSSNSGEPDAT 313
            +LCLGNDVEW+DEK CFQ ++AA+GNFYAMHPPLLPNPSG+G+QFY ++  S+  + D  
Sbjct: 600  LLCLGNDVEWEDEKSCFQGVSAAIGNFYAMHPPLLPNPSGDGIQFYSKRGESSQEKSD-- 657

Query: 312  TFGDSGEMGDDIEHELLSEAENAWAQREWTIQHVLFPSMKLFFNPPTSMATNGTFVQVAS 133
                + +M D+++ +LLS+AENAWAQREW+IQHVLFPSM+LF  PP SMA+NGTFV+VAS
Sbjct: 658  -LEGNVDMEDNLDQDLLSDAENAWAQREWSIQHVLFPSMRLFLKPPASMASNGTFVKVAS 716

Query: 132  LEKLFKIFERC 100
            LEKL+KIFERC
Sbjct: 717  LEKLYKIFERC 727


>ref|XP_002874562.1| hypothetical protein ARALYDRAFT_911184 [Arabidopsis lyrata subsp.
            lyrata] gi|297320399|gb|EFH50821.1| hypothetical protein
            ARALYDRAFT_911184 [Arabidopsis lyrata subsp. lyrata]
          Length = 727

 Score =  333 bits (855), Expect = 2e-89
 Identities = 164/251 (65%), Positives = 201/251 (80%), Gaps = 1/251 (0%)
 Frame = -3

Query: 849  ALLQHNTHLYLANVVNLSKELMYQQVLRRFAHFNAIQLSDXXXXXXXXXXXLXXXXXXXX 670
            AL+Q+NTHLYLANVVNLSKELMYQQ LRRFAHFNAIQLSD           L        
Sbjct: 480  ALVQYNTHLYLANVVNLSKELMYQQTLRRFAHFNAIQLSDPAPLSELILLALKEEDLDPE 539

Query: 669  XXXXXXXK-KIAEMNTDLLKQKSELLDEYFCIHVDAEGNLGRLPVILDQYTPEMDRVPEF 493
                   K +IAEMNT+LLK+K+E+L+EYF +++D++GNL RLPVILDQYTP+MDRVPEF
Sbjct: 540  TDKNDDLKERIAEMNTELLKEKAEMLEEYFSVYIDSDGNLSRLPVILDQYTPDMDRVPEF 599

Query: 492  VLCLGNDVEWDDEKKCFQTIAAALGNFYAMHPPLLPNPSGEGLQFYKRKPSSNSGEPDAT 313
            +LCLGNDVEW+DEK CFQ ++AA+GNFYAM+PPLLPNPSG+G+QFY ++  S+  + D  
Sbjct: 600  LLCLGNDVEWEDEKSCFQGVSAAIGNFYAMYPPLLPNPSGDGIQFYTKRGESSQEKSD-- 657

Query: 312  TFGDSGEMGDDIEHELLSEAENAWAQREWTIQHVLFPSMKLFFNPPTSMATNGTFVQVAS 133
                + EM D+++ +LLS+AENAWAQREW+IQHVLFPSM+LF  PP SMA+NGTFV+VAS
Sbjct: 658  -LDGNVEMEDNLDKDLLSDAENAWAQREWSIQHVLFPSMRLFLKPPASMASNGTFVKVAS 716

Query: 132  LEKLFKIFERC 100
            LEKL+KIFERC
Sbjct: 717  LEKLYKIFERC 727


>ref|XP_004168484.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Cucumis sativus]
          Length = 738

 Score =  332 bits (850), Expect = 8e-89
 Identities = 160/250 (64%), Positives = 193/250 (77%)
 Frame = -3

Query: 849  ALLQHNTHLYLANVVNLSKELMYQQVLRRFAHFNAIQLSDXXXXXXXXXXXLXXXXXXXX 670
            ALLQH THLYLANVVNLSKELMYQQVLRRFAHFNAIQLS+           L        
Sbjct: 489  ALLQHGTHLYLANVVNLSKELMYQQVLRRFAHFNAIQLSNPAPLFELLILALKEENANSE 548

Query: 669  XXXXXXXKKIAEMNTDLLKQKSELLDEYFCIHVDAEGNLGRLPVILDQYTPEMDRVPEFV 490
                   +K+AE+ T LLK K+E+L+E+FCIH+D  GNL RLPV+LDQYTP+MDRVPEF+
Sbjct: 549  CENDDFNEKVAEVTTKLLKLKAEMLEEFFCIHIDRNGNLARLPVVLDQYTPDMDRVPEFM 608

Query: 489  LCLGNDVEWDDEKKCFQTIAAALGNFYAMHPPLLPNPSGEGLQFYKRKPSSNSGEPDATT 310
            L L ND++W+DEK C Q+I+AA+GNFYAM+PPLLPNPSG+GLQFYKR   S + + + + 
Sbjct: 609  LSLANDIDWEDEKTCLQSISAAIGNFYAMNPPLLPNPSGDGLQFYKRIKLSGNSDEERSN 668

Query: 309  FGDSGEMGDDIEHELLSEAENAWAQREWTIQHVLFPSMKLFFNPPTSMATNGTFVQVASL 130
              D   M ++I+H+LLSEAE  WAQREW+IQHVLFPSMKLFF PP S+  NGTF++VASL
Sbjct: 669  CDDEVGMDNEIDHQLLSEAETIWAQREWSIQHVLFPSMKLFFKPPHSLGENGTFIRVASL 728

Query: 129  EKLFKIFERC 100
            EKL+KIFERC
Sbjct: 729  EKLYKIFERC 738